miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>47001_ath-miR394b:pmrd
          Length = 121

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 83  aggaggtgggtatactgccaatagagatctgttag 117
           |||||||||| ||||||||||||||||||||||||
Sbjct: 87  aggaggtgggcatactgccaatagagatctgttag 121



 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 1  cttacagtcatctttggcattctgtccacctcct 34
          |||||||  |||||||||||||||||||||||||
Sbjct: 1  cttacagagatctttggcattctgtccacctcct 34




>48920_osa-miR394:pmrd
          Length = 110

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 11 tctttggcattctgtccacctcctt 35
          |||||||||||||||||||||||||
Sbjct: 11 tctttggcattctgtccacctcctt 35




>54472_sbi-miR394b:pmrd
          Length = 111

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 ttggcattctgtccacctcctt 35
          ||||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcctt 42




>54471_sbi-miR394a:pmrd
          Length = 110

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 ttggcattctgtccacctcctt 35
          ||||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcctt 42




>55064_zma-miR394a:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 ttggcattctgtccacctcct 34
          |||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcct 41




>54853_vvi-miR394c:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tttggcattctgtccacctcc 33
          |||||||||||||||||||||
Sbjct: 10 tttggcattctgtccacctcc 30




>54851_vvi-miR394a:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 13 tttggcattctgtccacctcc 33
          |||||||||||||||||||||
Sbjct: 10 tttggcattctgtccacctcc 30




>51918_ptc-miRf10096-akr:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 ttggcattctgtccacctcct 34
          |||||||||||||||||||||
Sbjct: 25 ttggcattctgtccacctcct 45




>55065_zma-miR394b:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 14 ttggcattctgtccacctcc 33
          ||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40




>54852_vvi-miR394b:pmrd
          Length = 93

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 14 ttggcattctgtccacctcc 33
          ||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30




>48502_ghr-miR394:pmrd
          Length = 97

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 14 ttggcattctgtccacctcc 33
          ||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcc 20