miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 159 bits (80), Expect = 2e-38
Identities = 142/165 (86%), Gaps = 12/165 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 65 atgaatctag------------cacatacatatgtttagattcattaacatcaatatgaa 112
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 113 tgtgggaaatgctagaatgacttacattgtgaaacggagggagta 157
Score = 149 bits (75), Expect = 2e-35
Identities = 143/167 (85%), Gaps = 14/167 (8%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 158 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 99
Query: 73 aatgaatctagatatattattctcacattcatatgt-ctagattcattaacatcaatatg 131
|||||||||| | |||| ||||| |||||||||||||||||||||||
Sbjct: 98 aatgaatctaaacatat-------------gtatgtgctagattcattaacatcaatatg 52
Query: 132 aatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 51 aatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 159 bits (80), Expect = 2e-38
Identities = 144/168 (85%), Gaps = 13/168 (7%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 158 tgtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgt 99
Query: 72 taatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatg 131
||||||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 98 taatgaatctagacatat-------------atatgtctacattcattaacatcaatatg 52
Query: 132 aatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||| ||| |||||||||||||||||||||||| ||| ||||||||||
Sbjct: 51 aatgtagaaaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 123 bits (62), Expect = 9e-28
Identities = 126/150 (84%), Gaps = 13/150 (8%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||| |||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||| |||| |||| |||||||||||||||||||||||||||||||
Sbjct: 65 atgaatgtagacatat-------------atatgtctagattcattaacatcaatatgaa 111
Query: 134 tataggaaatgctagaatgacttacattgt 163
| | ||||||||||||||||||||||||||
Sbjct: 112 tgtgggaaatgctagaatgacttacattgt 141
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 3e-37
Identities = 143/165 (86%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| |||||| ||||||||||||||||||||||||
Sbjct: 98 atgaatctagata-aatat----------atatgtatagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | |||||||||||||||||||||||| |||| |||| ||||
Sbjct: 49 tatggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 142/166 (85%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||| | |||| || || | |||||||||||||||||||||||||
Sbjct: 64 aatgaatctatacatat---------at--atttatctagattcattaacatcaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 113 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 155 bits (78), Expect = 3e-37
Identities = 143/165 (86%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| ||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagataga-tat----------atatgtctacattcattaacatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||| |||||||||||||||||| |||| |||||||||
Sbjct: 114 tgtgggaaatattagaatgacttacattgtgaaacggaggaagta 158
Score = 123 bits (62), Expect = 9e-28
Identities = 139/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||| |||| |||| || || | ||||||||||||||||||||||||||
Sbjct: 98 atgaatgtagacatat---------at--atctatctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 144/167 (86%), Gaps = 11/167 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||||| || |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 4 gtactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||||| | ||| ||||||||||||||||||| ||||| ||||
Sbjct: 64 aatgaatctagataga-tat----------atatgtctagattcattaatatcaacatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|| ||| |||||||||||||||||||||||| |||| |||| |||||
Sbjct: 113 atttagaaaatgctagaatgacttacattgtgaaacggagggagtat 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/155 (82%), Gaps = 11/155 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||| || || | ||||||||||||||||||||||||||
Sbjct: 98 atgaatctagacatat---------at--atctatctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaac 168
| | |||||| |||||||||||||||||| ||||
Sbjct: 49 tgtgagaaatggtagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 142/165 (86%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||| | || || ||||||||||||||||| |||||||
Sbjct: 98 atgaatctagacatat-------atatcca----actagattcattaacatccatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| || ||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 138/166 (83%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||||||||||||||||| ||||||| | || |||||||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
||||||||||| | || || |||||||||||||||||||||| |||||||
Sbjct: 64 aatgaatctagttggat---------at--atatgtctagattcattaacattaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | ||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 113 atgtgagaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 147 bits (74), Expect = 6e-35
Identities = 144/170 (84%), Gaps = 13/170 (7%)
Strand = Plus / Plus
Query: 10 cttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 1 cttgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Query: 70 gttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaata 129
|||||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 61 gttaatgaatctagat-------------aggcatatgtccagattcattaacatcaata 107
Query: 130 tgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| || | |||||||||||||||||||| ||||| |||| ||||||||||
Sbjct: 108 taaacgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 157
Score = 103 bits (52), Expect = 9e-22
Identities = 136/165 (82%), Gaps = 13/165 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| ||||||||| ||| || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||| || |||| | ||| |||||||||||||||||||||||||
Sbjct: 96 atgaatctggacatatg-----------cctat--ctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 143 bits (72), Expect = 1e-33
Identities = 145/172 (84%), Gaps = 13/172 (7%)
Strand = Plus / Minus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||||| |||||||||||||||||||| |||||||| ||||||||||| | |||
Sbjct: 159 ttgtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatg 100
Query: 71 ttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatat 130
||||||||||||||||||| ||||||||| |||||||||||| | |||
Sbjct: 99 ttaatgaatctagatatat-------------atatgtctaaattcattaacatgagtat 53
Query: 131 gaatataggaaatgctagaatgacttacattgtaaaacagaggaagtatgtt 182
|||| | |||||||| ||||||||||| ||||| |||| |||||||||||||
Sbjct: 52 gaatgtgggaaatgccagaatgacttatattgtgaaacggaggaagtatgtt 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 132/165 (80%), Gaps = 13/165 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| | ||||||| |||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||| |||| |||| |||| ||||||||||||||||| | ||||||
Sbjct: 65 atgaatttagacatat-------------atatatctagattcattaacatgagtatgaa 111
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||| |||| |||| ||||
Sbjct: 112 tgtgaaaaatgctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 143 bits (72), Expect = 1e-33
Identities = 138/165 (83%), Gaps = 20/165 (12%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 89 atgaatctaga--------------------atgtctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 135/165 (81%), Gaps = 20/165 (12%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| || ||||||||||||||||||||||||||
Sbjct: 65 atgaatctagacat--------------------tctagattcattaacatcaatatgaa 104
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 105 tgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 142/166 (85%), Gaps = 11/166 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || ||||||||||||||| || | ||||||
Sbjct: 98 atgaatctagacata-tat----------atccgtctagattcattaatataagtatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | |||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 93.7 bits (47), Expect = 8e-19
Identities = 134/165 (81%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| | || |||||||||||||||||| |||||||||| |
Sbjct: 65 atgaatctaga-----------cggatatatatgtctagattcattagcatcaatatgga 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | ||||||||| ||||||||||||||| |||| |||| ||||
Sbjct: 114 tgtgagaaatgctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 145/170 (85%), Gaps = 11/170 (6%)
Strand = Plus / Plus
Query: 10 cttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||||||| |||| |||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 1 cttgtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgat 60
Query: 70 gttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaata 129
||||||||||||||||| | ||| ||||||||||||||||||||| |||||
Sbjct: 61 gttaatgaatctagataga-tat----------atatgtctagattcattaacaacaata 109
Query: 130 tgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||||| | |||||| ||||||||||||||||||| |||| |||| |||||
Sbjct: 110 tgaatgtgggaaatactagaatgacttacattgtgaaacggagggagtat 159
Score = 131 bits (66), Expect = 4e-30
Identities = 140/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | |||||||||||||||||||||||| |
Sbjct: 98 atgaatctagacata-tat----------atctatctagattcattaacatcaatatgga 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | |||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 2e-32
Identities = 141/165 (85%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| |||||||||||||||||||||||||||| ||
Sbjct: 98 atgaatctagataga-tat----------atatgtctagattcattaacatcaatataaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||| | ||||||||||||||| |||| |||||||||
Sbjct: 49 tgtgggaaatgcaaaaatgacttacattgtgaaacggaggaagta 5
Score = 129 bits (65), Expect = 2e-29
Identities = 130/152 (85%), Gaps = 11/152 (7%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| |||||||||||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgt 62
Query: 72 taatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatg 131
||||||||||||| ||| ||| || | |||||||||||||| |||||||||
Sbjct: 63 taatgaatctagacata-tat----------atctatctagattcattaatatcaatatg 111
Query: 132 aatataggaaatgctagaatgacttacattgt 163
||| | ||||||||||||||||||||||||||
Sbjct: 112 aatgtgggaaatgctagaatgacttacattgt 143
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 2e-32
Identities = 141/165 (85%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| ||||||||||||||||||| |||||||||||
Sbjct: 98 atgaatctagataga-tat----------atatgtctagattcattaatatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | ||||||| |||||||||||||||||| |||| |||| ||||
Sbjct: 49 tgtgggaaatgttagaatgacttacattgtgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 138/166 (83%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| || |||||| ||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||| ||| ||| || | |||||||||||||| ||||||||||
Sbjct: 64 aatgaatctagacata-tat----------atctatctagattcattaaaatcaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | |||| ||||||||||||||||||| |||| |||| ||||
Sbjct: 113 atgtgaaaaatactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 2e-32
Identities = 141/165 (85%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||| | | |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||| |||| || | || || | ||||||||||||||||||||||||||
Sbjct: 98 atgaatatagacatct---------at--atctatctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tataggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 141/169 (83%), Gaps = 11/169 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| | ||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagataga-tat----------agatgtctatattcattaacatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtatgtt 182
| | | |||||||||||||||||||||| |||| |||| ||||||||
Sbjct: 114 tgcggaatatgctagaatgacttacattgtgaaacggagggagtatgtt 162
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 2e-32
Identities = 141/165 (85%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| |||||||||||||||||||||||||||||||
Sbjct: 98 atgaatctagataga-tat----------atatgtctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | || ||||||| ||||||||||||||| |||| |||| ||||
Sbjct: 49 tgtgggtaatgctataatgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 4e-30
Identities = 140/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | ||||||||||||||||| ||||||||
Sbjct: 65 atgaatctagacata-tat----------atctatctagattcattaacattaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||| ||||||||| ||||| |||| |||||||||
Sbjct: 114 tgtgggaaatgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 135 bits (68), Expect = 2e-31
Identities = 140/168 (83%), Gaps = 17/168 (10%)
Strand = Plus / Plus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 71 ttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatat 130
|||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 62 ctaatgaatctagat-----------------atatgtctagattcattagcatcaatat 104
Query: 131 gaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||| |||||||||||||||||||||| ||||| |||| |||| ||||
Sbjct: 105 gaatgtaggaaatgctagaatgacttatattgtgaaacggagggagta 152
Score = 121 bits (61), Expect = 4e-27
Identities = 136/165 (82%), Gaps = 17/165 (10%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 92 atgaatctaga-----------------catatatctagattcattagcatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 133 bits (67), Expect = 1e-30
Identities = 141/165 (85%), Gaps = 13/165 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|| |||||| ||| || || |||||||||||||||||||||||||||||||
Sbjct: 98 ataaatctatatagat---------at--atatgtctagattcattaacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| ||||||||| |||||||||||||||| |||| |||| ||||
Sbjct: 49 tatgggaaatgcttgaatgacttacattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 133 bits (67), Expect = 1e-30
Identities = 141/165 (85%), Gaps = 13/165 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|| |||||| ||| || || |||||||||||||||||||||||||||||||
Sbjct: 63 ataaatctatatagat---------at--atatgtctagattcattaacatcaatatgaa 111
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| ||||||||| |||||||||||||||| |||| |||| ||||
Sbjct: 112 tatgggaaatgcttgaatgacttacattgtgaaacggagggagta 156
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 96 atgaatctagacatat 81
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 1e-30
Identities = 141/166 (84%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||||| | ||| |||||||||||||||||||||| |||||||
Sbjct: 64 aatgaatctagataga-tat----------atatgtctagattcattaacattaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | | ||||||||||||||||||||||| |||| |||| ||||
Sbjct: 113 atgtggagaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 138/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | |||||||||||||||| ||||||||
Sbjct: 98 atgaatctagacata-tat----------atctatctagattcattaacactaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 49 tgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 140/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||| || || | ||||||||||||||| ||||||||||
Sbjct: 98 atgaatctagaaatat---------at--atctatctagattcattaacgtcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 141/169 (83%), Gaps = 11/169 (6%)
Strand = Plus / Plus
Query: 10 cttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 1 cttgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgac 60
Query: 70 gttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaata 129
||||||||||||||||| | ||| |||| ||||||||||||| ||||||||
Sbjct: 61 gttaatgaatctagataga-tat----------atatttctagattcattaccatcaata 109
Query: 130 tgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| ||| | |||||| ||| ||||||||| ||||| |||| |||| ||||
Sbjct: 110 ttaatgtgggaaattctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 140/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||| |||||||| || || |||||||||||||||||| ||||||||||||
Sbjct: 65 atgactctagatagat---------at--atatgtctagattcattagcatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||| |||||||||||||||||| ||||| |||| |||| ||||
Sbjct: 114 tatagaaaatgctagaatgacttatattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 6e-23
Identities = 140/169 (82%), Gaps = 11/169 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||| |||||||| | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||| || || | |||||| ||||||||||||||| |||
Sbjct: 98 atgaatctagacatat---------at--atctatctagagtcattaacatcaatacgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtatgtt 182
| | | |||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagtatgtt 1
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 140/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| || ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||| ||| || || |||||||||||||||||||||||| ||||||
Sbjct: 98 atgaatctaaatagat---------at--atatgtctagattcattaacatcactatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 138/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | | |||||||||||| |||||||||||
Sbjct: 65 atgaatctagacata-tat----------atctatttagattcattaatatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | ||||| |||||||||||||||||| |||| |||| ||||
Sbjct: 114 tgtggaaaatgttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 140/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||||| | ||||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||||||||||| || |||||||||||||||||||||| |||||||
Sbjct: 98 atgaatctagatatatg----------tc-tatgtctagattcattaacatctatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| ||||||||||||||||||||| | |||| |||| ||||
Sbjct: 49 tataggcaatgctagaatgacttacattatgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 133/165 (80%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||| | | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| || | ||||| |||||||||||||||||| |||||||
Sbjct: 65 atgaatctaga-----------catagacatatatctagattcattaacatccatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | | ||||||||||||||||||| | |||| |||||||||
Sbjct: 114 tgtgagcattgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 2e-29
Identities = 127/148 (85%), Gaps = 11/148 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| |||||||||||||||||| ||||||||||||
Sbjct: 65 atgaatctagataga-tat----------atatgtctagattcattaccatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacatt 161
| | ||||||| | ||||||||||||||
Sbjct: 114 tgtgggaaatggtggaatgacttacatt 141
Score = 113 bits (57), Expect = 9e-25
Identities = 140/168 (83%), Gaps = 11/168 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||||| || |||||| ||||||||||||| | |||||| |||||||||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||| || || | |||||||||||||||| |||||||||
Sbjct: 98 atgaatctagacatat---------at--atctatctagattcattaacaacaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtatgt 181
| | |||||||||||||||||||||||||| |||| |||| |||||||
Sbjct: 49 tgtgggaaatgctagaatgacttacattgtgaaacggagggagtatgt 2
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 2e-29
Identities = 142/168 (84%), Gaps = 11/168 (6%)
Strand = Plus / Minus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||||| ||| |||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 161 ttgtactccctccgttccacaatataagtcattctagcatttttcacattcatattgata 102
Query: 71 ttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatat 130
|||||||||||| ||| || || ||||||||||||||||||||| ||||||
Sbjct: 101 ttaatgaatctaaatagat---------at--atatgtctagattcattaacaccaatat 53
Query: 131 gaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 52 aaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 127 bits (64), Expect = 6e-29
Identities = 138/165 (83%), Gaps = 12/165 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | | |||| ||||||||||||||||| ||||| ||
Sbjct: 65 atgaatctagatagaat------------atatatctagattcattaacattaatataaa 112
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| ||||||| |||||||||||||||||| |||| |||| ||||
Sbjct: 113 tatgggaaatgttagaatgacttacattgtgaaacggagggagta 157
Score = 119 bits (60), Expect = 1e-26
Identities = 139/166 (83%), Gaps = 12/166 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| || |||||| || ||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||||| ||||| | ||||||||||||| ||||||||||||
Sbjct: 97 atgaatctagatata-tattc-----------tatctagattcattaccatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | |||||||||||||||||||||||| |||| ||||||||||
Sbjct: 49 tgtgagaaatgctagaatgacttacattgcgaaacggaggaagtat 4
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 127 bits (64), Expect = 6e-29
Identities = 141/167 (84%), Gaps = 11/167 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||| || ||| |||| | ||||||||| |||||| ||||||
Sbjct: 64 aatgaatctagacat-ctat----------atatatttagattcatcaacatctatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|| | |||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 113 atgtgggaaatgctagaatgacttacattgtgaaacggagggagtat 159
Score = 107 bits (54), Expect = 6e-23
Identities = 137/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||| ||||| ||| | ||||||||||||||||||||| |||||||
Sbjct: 98 atgaatctaaatata-tat----------agatgtctagattcattaacatctatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||| || ||||||||||| ||| |||| |||| ||||
Sbjct: 49 tgtgagaaatgataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 127 bits (64), Expect = 6e-29
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 73 aatgaatctaga 84
||||||||||||
Sbjct: 88 aatgaatctaga 77
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtt 63
Query: 73 aat 75
|||
Sbjct: 64 aat 66
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||| |
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 166 aacagaggaagta 178
||| |||| ||||
Sbjct: 135 aacggagggagta 147
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||||||||| ||| | |||| ||| ||||||||||||||| ||||||||| ||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 177 ta 178
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 140/166 (84%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||||| | ||| |||||||||||||||||| |||||||||||
Sbjct: 64 aatgaatctagataga-tat----------atatgtctagattcattagcatcaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | | ||||| |||||||||||||||||| |||| |||| ||||
Sbjct: 113 atgtggtaaatgttagaatgacttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 6e-23
Identities = 137/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | ||||||||||||| |||||||||||
Sbjct: 98 atgaatctagacata-tat----------atctatctagattcattagtatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | ||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 49 tgtgagaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatt 63
Query: 73 aatgaatctagatat 87
|||||||||||||||
Sbjct: 64 aatgaatctagatat 78
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 116 cattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaa 175
|||| |||||||||||||||| |||||||||||||||||||||||||| |||| ||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 176 gtatgtt 182
|||||||
Sbjct: 140 gtatgtt 146
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||||||||||||| |||||||||||| | ||||||||||||||||||||||||| |||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 74 atg 76
|||
Sbjct: 82 atg 80
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 139/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| || || ||||||||||||||||||| |||||||||||
Sbjct: 98 atgaatctagatagat---------at--atatgtctagattcattaatatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | ||||||| |||||||||||||||||| |||| |||| ||||
Sbjct: 49 tgtgggaaatgatagaatgacttacattgtgaaacggagggagta 5
Score = 117 bits (59), Expect = 6e-26
Identities = 142/170 (83%), Gaps = 11/170 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| || |||||| ||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||| ||| ||| || | ||||||||||||||| ||||||
Sbjct: 64 aatgaatctagacata-tat----------atctatctagattcattaactaatatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagtatgtt 182
|| | ||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 113 atgtgagaaatgctagaatgacttacattgtgaaacggaggaagtatgtt 162
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 139/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|| ||| ||| || || || |||||||||||||||||||||||||||||||
Sbjct: 65 ataaatttagctaaat---------at--atatgtctagattcattaacatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 114 tgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 139/165 (84%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||||| | ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||||||||||| || ||| |||||||||||||||||| |||||||
Sbjct: 65 atgaatctagatatat--gtc---------tatatctagattcattaacatctatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| ||||||||||||||||||||| | |||| |||| ||||
Sbjct: 114 tataggcaatgctagaatgacttacattatgaaacggagggagta 158
Score = 93.7 bits (47), Expect = 8e-19
Identities = 134/165 (81%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||| | | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||||||||| | ||||| |||||||||||||||||| |||||||
Sbjct: 98 atgaatctagatat-----------agacatatatctagattcattaacatccatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | | ||||||||||||||||||| | |||| |||||||||
Sbjct: 49 tgtgagcattgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 123 bits (62), Expect = 9e-28
Identities = 106/121 (87%), Gaps = 11/121 (9%)
Strand = Plus / Plus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatctagatatattattct 95
|||||||| |||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagataga-tat--- 56
Query: 96 cacattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatgact 155
|||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 57 -------atatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 109
Query: 156 t 156
|
Sbjct: 110 t 110
Score = 91.7 bits (46), Expect = 3e-18
Identities = 102/121 (84%), Gaps = 11/121 (9%)
Strand = Plus / Minus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatctagatatattattct 95
|||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacata-tat--- 55
Query: 96 cacattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatgact 155
|| | ||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 54 -------atctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgact 2
Query: 156 t 156
|
Sbjct: 1 t 1
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 123 bits (62), Expect = 9e-28
Identities = 137/166 (82%), Gaps = 17/166 (10%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| || ||||||||||||||| |||||||||||||
Sbjct: 92 atgaatctaga-----------------cagatgtctagattcattgacatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | ||||||| |||||||||||||||||| |||| ||||||||||
Sbjct: 49 tgtgggaaatgatagaatgacttacattgtgaaacggaggaagtat 4
Score = 105 bits (53), Expect = 2e-22
Identities = 134/165 (81%), Gaps = 17/165 (10%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| || |||||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct: 65 atgaatctaga-----------------catctgtctagattcattgacatcaatatgaa 107
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||||||| | |||| |||| ||||
Sbjct: 108 tgtgggaaatgctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 121 bits (61), Expect = 4e-27
Identities = 142/169 (84%), Gaps = 15/169 (8%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatca----ata 129
||||||||||| ||| ||| || | ||||||||||||||||||| ||
Sbjct: 102 atgaatctagacata-tat----------atctatctagattcattaacatcactatgta 54
Query: 130 tgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||| ||||||||||||||||||||||||| |||| |||||||||
Sbjct: 53 tgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 142/170 (83%), Gaps = 15/170 (8%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat----tga 68
||||| |||| |||||||||||||||||||| ||||||||| || ||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 69 tgttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaat 128
|||||||||||||||||| || || |||||||||||||||||||||||| |
Sbjct: 64 tgttaatgaatctagatagat---------at--atatgtctagattcattaacatcact 112
Query: 129 atgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 113 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 121 bits (61), Expect = 4e-27
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 74 atgaatcta 82
|||||||||
Sbjct: 70 atgaatcta 62
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 122 gagggagta 130
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 74 at 75
||
Sbjct: 61 at 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||||||||||||| | | |||||||| ||||||||| ||||| ||||||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 177 ta 178
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 140/167 (83%), Gaps = 11/167 (6%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |
Sbjct: 160 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatat 101
Query: 72 taatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatg 131
||||||||||||||||| ||| || | ||||||||||||||||| ||||||
Sbjct: 100 taatgaatctagatata-tat----------atttatctagattcattaacattaatatg 52
Query: 132 aatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | | ||| | |||||||||||| ||||| |||| |||||||||
Sbjct: 51 aatgtggaaaaagttagaatgacttatattgtgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 136/165 (82%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| || | ||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| || || |||| |||||||||||||| |||||||||||
Sbjct: 65 atgaatctagataaat---------at--atatatctagattcattaatatcaatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||||||||||||| ||||| |||| |||| ||||
Sbjct: 114 tgtgggaaatgctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 80 atatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 163 taaaacagaggaagta 178
| |||| |||||||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 113 bits (57), Expect = 9e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 73 aatgaatctagatatat 89
|||||||||||| ||||
Sbjct: 64 aatgaatctagacatat 80
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagt 39
||||||||| ||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 6e-26
Identities = 137/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||| |||||||||||| ||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| |||| ||| | ||||||||||||||||||||||| ||
Sbjct: 65 atgaatctagacatatatttc-----------tatctagattcattaacatcaatataaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||| |||||||||| |||| |||| |||||||||
Sbjct: 114 tgtgggaaatgctaaaatgacttactttgtgaaacggaggaagta 158
Score = 113 bits (57), Expect = 9e-25
Identities = 140/168 (83%), Gaps = 11/168 (6%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| ||||||||| |||||||||||||||||||| |||||| ||||||||||
Sbjct: 160 tgtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgt 101
Query: 72 taatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatg 131
||||||||||||||| | || |||||||||||||||| |||||||||||
Sbjct: 100 taatgaatctagataga-aat----------atatgtctagattcataaacatcaatata 52
Query: 132 aatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||| | |||||||| | |||||||||| |||| |||| |||| |||||
Sbjct: 51 aatgtgggaaatgcaaaaatgacttactttgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 24 gtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaatctag 83
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 84 at 85
||
Sbjct: 75 at 76
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagtatgtt 182
| || ||||||||||
Sbjct: 15 cggaagaagtatgtt 1
Score = 83.8 bits (42), Expect = 8e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||| |||||||| ||||| | |||||||||||||||||||||||| ||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 170 gaggaagtat 179
|||| |||||
Sbjct: 138 gagggagtat 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| || ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 74 atgaatcta 82
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 115 bits (58), Expect = 2e-25
Identities = 137/166 (82%), Gaps = 13/166 (7%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| |||| ||||||||||||||||| |||||||||||| ||||||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||| |||| |||||||| |||||||||||||| | ||||
Sbjct: 97 aatgaatctatgcatat-------------atatgtcttgattcattaacatctacatga 51
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | |||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 50 atgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 74 atgaatctagatatat 89
||||||| ||| ||||
Sbjct: 65 atgaatcaagacatat 80
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 24 gtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaatctag 83
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 84 at 85
||
Sbjct: 75 at 76
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagtatgtt 182
| || ||||||||||
Sbjct: 15 cggaagaagtatgtt 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| || ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 74 atgaatcta 82
|||||||||
Sbjct: 86 atgaatcta 78
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||| |||||||| ||||| | |||||||| ||||||||||||||| ||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 170 gaggaagtat 179
|||| |||||
Sbjct: 138 gagggagtat 147
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 3 tgtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 62
Query: 72 taatgaatctagatatat 89
||||||||||||| ||||
Sbjct: 63 taatgaatctagacatat 80
Score = 111 bits (56), Expect = 4e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 80 atatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattg 21
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 20 tgaaacggaggtagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||| || || |||||||||||||||||||||||| |||| |||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggaggaagta 140
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| |||||||||||||||||||| |||||||| |||| |||||||||||
Sbjct: 142 tgtacttcctccgtttcacaatgtaagtcattctagcattttgtacatacatattgatgt 83
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 138/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| || ||| ||||| |||||||||||| |||| |||||||
Sbjct: 98 atgaatctagactta-tat----------atatgcctagattcattagcatctatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | |||||||||||||| |||||||| |||| |||||||||
Sbjct: 49 tgtggacaatgctagaatgacatacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 137/166 (82%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| ||||||||||||| |||||| ||||||| ||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
||||||||||| |||| || ||| ||||||||||||||||||||||||||
Sbjct: 64 aatgaatctaggcatat---------at--ataagtctagattcattaacatcaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | | |||||||||||||||||||||||| |||| |||| ||||
Sbjct: 113 atgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 3 tgtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgt 62
Query: 72 taatgaatctagatatat 89
||||||||||||| ||||
Sbjct: 63 taatgaatctagacatat 80
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 80 atatgtctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacatta 21
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 20 tgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 128 tatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcata 64
||||| |||| |||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 146 gtacttcctccgttttacaatgtaagtcattctagcatttcccacattcata 95
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 141/169 (83%), Gaps = 11/169 (6%)
Strand = Plus / Plus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||||| |||||| |||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 2 ttgtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatg 61
Query: 71 ttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatat 130
|||||||||||||| | ||||| |||| |||||||||||||||||| ||||
Sbjct: 62 ttaatgaatctaga---------cacacat--atatttctagattcattaacatctatat 110
Query: 131 gaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||| | || |||||||||| | |||||||| | |||| ||||||||||
Sbjct: 111 gaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtat 159
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| |||||||| | || ||||||| | ||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagaaatat 83
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 141/169 (83%), Gaps = 11/169 (6%)
Strand = Plus / Minus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||||| |||||| |||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 161 ttgtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatg 102
Query: 71 ttaatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatat 130
|||||||||||||| | ||||| |||| |||||||||||||||||| ||||
Sbjct: 101 ttaatgaatctaga---------cacacat--atatttctagattcattaacatctatat 53
Query: 131 gaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||| | || |||||||||| | |||||||| | |||| ||||||||||
Sbjct: 52 gaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtat 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| |||||||| | || ||||||| | ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagaaatat 80
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtt 69
Query: 73 aatgaatctagata 86
||||||||||||||
Sbjct: 68 aatgaatctagata 55
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| |||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 117 cggaggaagta 127
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||||||||||| |||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttc 53
||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 166 aacagaggaagta 178
||| |||| ||||
Sbjct: 127 aacggagggagta 139
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 140 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 81
Query: 73 aatgaatctaga 84
||||||||||||
Sbjct: 80 aatgaatctaga 69
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 129 atgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||| |||||||||||||||||||||||| | |||| ||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcat 63
|||| |||| |||||| ||||||||||||| ||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 113 bits (57), Expect = 9e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 143 tgtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgt 84
Query: 72 taatgaatc 80
|||||||||
Sbjct: 83 taatgaatc 75
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacaga 171
||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| ||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 172 ggaagta 178
|||||||
Sbjct: 11 ggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaatc 80
|||||||
Sbjct: 65 atgaatc 71
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacaga 171
||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||| ||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 172 ggaagta 178
|| ||||
Sbjct: 135 gggagta 141
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 113 bits (57), Expect = 9e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 74 atgaa 78
|||||
Sbjct: 89 atgaa 85
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 114 ttcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagg 173
||||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 174 aagta 178
||||
Sbjct: 145 gagta 149
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 17 tccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatg 76
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 77 aatctagatatat 89
|||||||| ||||
Sbjct: 95 aatctagacatat 83
Score = 111 bits (56), Expect = 4e-24
Identities = 131/157 (83%), Gaps = 11/157 (7%)
Strand = Plus / Plus
Query: 17 tccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatg 76
|||||| |||||||||||||||||||| |||||| ||||||||||||||||| | ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 77 aatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaatat 136
|||||||| ||| ||| ||||||||||||||||| |||||||||||||| |
Sbjct: 68 aatctagacata---------cat--atatgtctagattcattgacatcaatatgaatgt 116
Query: 137 aggaaatgctagaatgacttacattgtaaaacagagg 173
||||||||||||||||||||||||| |||| ||||
Sbjct: 117 gagaaatgctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 166 aacagaggaagta 178
||| |||| ||||
Sbjct: 17 aacggagggagta 5
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 73 aatgaatctaga 84
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 129 atgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||| |||||||||||||||||||||||| | |||| ||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcat 63
|||| |||| |||||| ||||||||||||| ||||||||| || ||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 74 atgaatctagata 86
||||||| |||||
Sbjct: 74 atgaatcaagata 62
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacaga 171
||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| ||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 172 ggaagta 178
|||||||
Sbjct: 128 ggaagta 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||| || |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 4 gtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
|||||||||||||| | | |||||| | ||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaac 15
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtt 63
Query: 73 aatgaatctagat 85
|||||||||||||
Sbjct: 64 aatgaatctagat 76
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 168 cagaggaagtat 179
| ||||||||||
Sbjct: 130 cggaggaagtat 141
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||||||||| || ||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 74 atgaatctagat 85
||||||||||||
Sbjct: 80 atgaatctagat 69
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 113 bits (57), Expect = 9e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 76 atgaatctagata 64
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| |||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 126 cggagggagta 136
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||| |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||| |||| |||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 74 atgaatctagat 85
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 135
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 136 cggaggaagta 146
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||| || ||||||||||||| | |||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| ||| |||||| ||||||||| |||||||| | |||||||||||||||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 73 aatgaatctagat 85
|||||||||||||
Sbjct: 87 aatgaatctagat 75
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| |||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 74 atgaatctagat 85
||||||||||||
Sbjct: 86 atgaatctagat 75
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtggaa 16
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||| || ||||||||||||| | |||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 136 cggagggagta 146
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| ||| |||||| ||||||||| |||||||| | |||||||||||||||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 73 aatgaatctagat 85
|||||||||||||
Sbjct: 64 aatgaatctagat 76
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 111 bits (56), Expect = 4e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 89 atgaatctagacatat 74
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||
Sbjct: 74 atatgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattg 133
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 134 tgaaacggagggagta 149
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 4e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgt 83
Query: 72 taatgaatctagatatatta 91
||||||||||| | ||||||
Sbjct: 82 taatgaatctatacatatta 63
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||| ||||||||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 125 tgaaacggagggagta 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| |||||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 72 taat 75
||||
Sbjct: 63 taat 66
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||| ||||||||| | |||||||||||||||||||||||||| |||| |||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 177 ta 178
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 74 atgaatctagatata 88
|||||||||| ||||
Sbjct: 65 atgaatctagctata 79
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
|||||||||||| ||||||||||||| | |||||||||| ||||||||||||||| ||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 169 agaggaagta 178
|||||||||
Sbjct: 14 ggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcat-tttagcatttctcacattcatattgatgtt 72
||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 73 aatg 76
||||
Sbjct: 83 aatg 80
Score = 56.0 bits (28), Expect = 2e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 116 cattaacatcaatatgaatataggaaatgctaga-atgacttacattgtaaaacagagga 174
||||| ||||||||||||| | |||||||||| | |||||||||||||| |||| ||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 175 agta 178
||||
Sbjct: 140 agta 143
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 74 atgaatctaga 84
||||| |||||
Sbjct: 86 atgaaactaga 76
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 104 tatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgt 163
||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgt 131
Query: 164 aaaacagaggaagta 178
|||| |||| ||||
Sbjct: 132 gaaaccgagggagta 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
||||||||||||||||||||||||| | | |||||||||||||||||||||| | ||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 170 gaggaagta 178
|||||||||
Sbjct: 13 gaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 74 atgaatctagatata 88
||| |||||||||||
Sbjct: 65 atgtatctagatata 79
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
||||| ||||||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 170 gaggaagtat 179
||||||||||
Sbjct: 138 gaggaagtat 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||| |||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 74 atgaatcta 82
||| |||||
Sbjct: 86 atgtatcta 78
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||| ||||||||||||||||||| | | |||||||||||||||||||||||| |||
Sbjct: 75 tctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagtat 179
| |||| |||||
Sbjct: 15 cggagggagtat 4
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 74 atgaatctagatata 88
|||||||||| ||||
Sbjct: 83 atgaatctagctata 69
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
|||||||||||| ||||||||||||| | |||||||||| ||||||||||||||| ||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 169 agaggaagta 178
|||||||||
Sbjct: 134 ggaggaagta 143
Score = 87.7 bits (44), Expect = 5e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcat-tttagcatttctcacattcatattgatgtt 72
||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 73 aatg 76
||||
Sbjct: 65 aatg 68
Score = 56.0 bits (28), Expect = 2e-07
Identities = 56/64 (87%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 116 cattaacatcaatatgaatataggaaatgctaga-atgacttacattgtaaaacagagga 174
||||| ||||||||||||| | |||||||||| | |||||||||||||| |||| ||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 175 agta 178
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 109 bits (55), Expect = 1e-23
Identities = 135/167 (80%), Gaps = 21/167 (12%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||| | |||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 149 gtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 90
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
||||||| || ||||||||||||||||||||| ||||| |
Sbjct: 89 aatgaatata---------------------tatgtctagattcattaacattaatataa 51
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|| | |||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 138
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtt 63
Query: 73 aatgaatctagatat 87
|||||||||||||||
Sbjct: 64 aatgaatctagatat 78
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||||||||||||| |||||||| |||||||||||| ||||| |||| |||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 177 tat 179
|||
Sbjct: 137 tat 139
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 74 at 75
||
Sbjct: 78 at 77
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 107 bits (54), Expect = 6e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
|||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| |
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 166 aacagaggaagtat 179
||| ||||||||||
Sbjct: 17 aacggaggaagtat 4
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 120 aacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||| | |||||||||||||||||||||||| | |||| |||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 107 bits (54), Expect = 6e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
|||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 173 gaagta 178
||||||
Sbjct: 109 gaagta 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 74 atgaat 79
||||||
Sbjct: 54 atgaat 49
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcat 63
|||||||||| |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 129 atgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 107 bits (54), Expect = 6e-23
Identities = 137/165 (83%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| |||| |||| |||||||| ||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | ||||||||||||||||| ||||||||
Sbjct: 98 atgaatctagacata-tat----------atctatctagattcattaacataaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | |||||||||| ||||||||| ||||| |||| |||||||||
Sbjct: 49 tgtgggaaatgctacaatgacttatattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 137/166 (82%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| ||||||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| |||||||||||||||||| ||||||||| ||
Sbjct: 65 atgaatctagataga-tat----------atatgtctagattcattatcatcaatataaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | ||||||||||||| |||| ||||| |||| |||| |||||
Sbjct: 114 tgtgaaaaatgctagaatggcttatattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 107 bits (54), Expect = 6e-23
Identities = 104/121 (85%), Gaps = 11/121 (9%)
Strand = Plus / Minus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatctagatatattattct 95
|||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagat------ 57
Query: 96 cacattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatgact 155
|| |||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 56 ---at--atatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgact 2
Query: 156 t 156
|
Sbjct: 1 t 1
Score = 91.7 bits (46), Expect = 3e-18
Identities = 102/121 (84%), Gaps = 11/121 (9%)
Strand = Plus / Plus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatctagatatattattct 95
|||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacata-tat--- 56
Query: 96 cacattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatgact 155
|| | | ||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 57 -------atctatttagattcattaacatcaatatgaatgtgggaaatgctagaatgact 109
Query: 156 t 156
|
Sbjct: 110 t 110
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 17 tccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatg 76
|||||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 77 aatctagatatat 89
|||||||| ||||
Sbjct: 75 aatctagacatat 63
Score = 93.7 bits (47), Expect = 8e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 17 tccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||| |||| ||||||||| | ||||||||||||||||||||||||
Sbjct: 63 atatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattg 122
Query: 163 taaaacagagg 173
| |||| ||||
Sbjct: 123 tgaaacggagg 133
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagg 173
|||||||||||||| | ||||||||||||||||||||||||| |||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 63 atgaatctagata 51
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 113 cggagggagta 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||||||||||||| |||| ||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcattt 52
|||| |||| |||||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 70 atgaatctagata 58
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||||||||||||||||||||||| | | |||||||| ||||||||||||||| |||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 120 cggaggaagta 130
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||||| |||| ||||||||||||||||||| ||||| |||||| ||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 74 atgaatctagata 86
|| ||||||||||
Sbjct: 85 ataaatctagata 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatg 61
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 75 tctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaaa 134
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 135 cggagggagta 145
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 122 catcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||| | |||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| |||||||| | |||||||||||||||||||||||||| ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 13 gagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||| |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 127 atatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 73 aatgaatctagatatat 89
||||||| |||||||||
Sbjct: 64 aatgaatttagatatat 80
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 92 atgaatctagagatat 77
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||||||||||||||| ||||||||||||| ||| ||||| |||||||||| |||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 73 aatgaatctagatatat 89
||| |||||||||||||
Sbjct: 85 aataaatctagatatat 69
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||| |||||||| |||||||||| ||||||| | |||||| |||||||||||||||||
Sbjct: 69 atatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttacatta 128
Query: 163 taaaacagaggaagta 178
| ||||||||| ||||
Sbjct: 129 tgaaacagagggagta 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 74 at 75
||
Sbjct: 65 at 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||||| ||||||| | |||||||||||||||||||||| | |||| |||||||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 177 ta 178
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtt 63
Query: 73 aatga 77
|||||
Sbjct: 64 aatga 68
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtt 70
Query: 73 a 73
|
Sbjct: 69 a 69
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
|||||||||||||||||||| | | |||||||| ||||||||||||||| |||| ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 175 agta 178
||||
Sbjct: 8 agta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 119 taacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||| | | |||||||| ||| | ||||||||| |||| |||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtt 63
Query: 73 aatgaatctagatatat 89
||||||| || ||||||
Sbjct: 64 aatgaatatatatatat 80
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
||||||||||| |||||||||| | ||||||||||||||||||||||||| |||| |||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 173 gaagta 178
||||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 127 atatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtatg 180
|||||||||| | |||||||||||||||||||||||| |||| |||| ||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtatg 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||| |||||||||||||||||||| |||||||| || ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||| || |||||| |||||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 75 atgaatctagata 63
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||| |||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 168 cagaggaagtat 179
| |||| |||||
Sbjct: 125 cggagggagtat 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 119 taacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||| | | |||||||||||||||||| ||||| |||| |||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||| || ||||||||| | |||||||||||||||||||||||||
Sbjct: 60 atatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattg 119
Query: 163 taaaacagaggaagtat 179
| |||| ||||||||||
Sbjct: 120 tgaaacggaggaagtat 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 75 atgaatctagacatat 60
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
||||||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 126 aatatgaatataggaaatgctagaatgacttacattgt 163
||||||||| | ||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgt 20
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 54 atatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacatta 113
Query: 163 taaaacagaggaagta 178
| |||| |||||||||
Sbjct: 114 tgaaacggaggaagta 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 74 atgaatctagatatat 89
||| ||||||| ||||
Sbjct: 69 atggatctagacatat 54
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagt 39
||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 103 bits (52), Expect = 9e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 107 gtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaa 166
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 167 acagaggaagta 178
|| |||| ||||
Sbjct: 134 acggagggagta 145
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 85 atgaatctaga 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 19 cctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaa 78
|||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 79 tctag 83
|||||
Sbjct: 70 tctag 74
Score = 73.8 bits (37), Expect = 8e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
||||||| |||||||||||||| ||| | ||||||||||||||||||||||| | ||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 169 agaggaagt 177
||||||||
Sbjct: 14 ggaggaagt 6
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||
Sbjct: 80 atatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattg 21
Query: 163 taaaacagaggaagtat 179
| |||| ||||||||||
Sbjct: 20 tgaaacggaggaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 122 catcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtatg 180
||||||||||||| | | |||||||| ||||||||| ||||| |||| |||| ||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtatg 141
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 103 bits (52), Expect = 9e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 74 atgaatctagat 85
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 74 atgaatctagat 85
|||||| |||||
Sbjct: 86 atgaatttagat 75
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| ||||||||||||| | |||||||||||| ||||||||||| |||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 168 cagaggaagtat 179
| |||| |||||
Sbjct: 15 cggagggagtat 4
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 103 bits (52), Expect = 9e-22
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||||
Sbjct: 142 tgtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgt 83
Query: 72 taatgaatctagatatatta 91
||||||||||| | ||||||
Sbjct: 82 taatgaatctatacatatta 63
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| |||||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgt 62
Query: 72 taat 75
||||
Sbjct: 63 taat 66
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||| ||||||||||||||||||||||||| | | |||||||||||||||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 125 tgaaacggagggagta 140
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||| ||||||||| | |||||||||||||||||||||||||| |||| |||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 177 ta 178
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 103 bits (52), Expect = 9e-22
Identities = 135/165 (81%), Gaps = 17/165 (10%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||| | ||||| | || ||||||||||||| |||||||||||||
Sbjct: 65 atgagtttagat-----------agatacatatgtctagat------acatcaatatgaa 107
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | |||||||||||||||||||||||| |||| |||||||||
Sbjct: 108 tatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
||||||||||| |||||||| | | |||||||||||||||||||||||| |||| ||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 175 agta 178
||||
Sbjct: 8 agta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||| |||| |||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 95
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 9e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 74 atga 77
||||
Sbjct: 65 atga 68
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 74 atgaatct 81
||||||||
Sbjct: 75 atgaatct 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 111 agattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacag 170
|||||||||| ||||||||||||| | ||||||||||||||||||| ||||| |||| |
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 171 aggaagta 178
||||||||
Sbjct: 128 aggaagta 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
|||||| ||||||||||||| | |||||||||||||||||||||| || |||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 175 agta 178
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 103 bits (52), Expect = 9e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 74 atgaatctagatatat 89
||||||||||||||||
Sbjct: 55 atgaatctagatatat 40
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||
Sbjct: 39 catatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatt 98
Query: 162 gtaaaacagaggaagtat 179
| |||| ||||||||||
Sbjct: 99 atgaaacggaggaagtat 116
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcat 50
||||||||| |||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 142 atgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||| |||| |||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgt 62
Query: 72 taa 74
|||
Sbjct: 63 taa 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 74 a 74
|
Sbjct: 62 a 62
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 118 ttaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagt 177
||||||||||||| ||||| ||||||||| ||||||||| ||||| |||| ||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 178 at 179
||
Sbjct: 122 at 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 118 ttaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagt 177
||||||||||||| ||||| ||||||||| ||||||||||||||| |||| |||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 178 a 178
|
Sbjct: 5 a 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 74 atgaatctagatata 88
||||||||| |||||
Sbjct: 66 atgaatctaaatata 52
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||| |||||||||||||| ||||||||||||||||||||||| | ||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 118 gagggagta 126
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||| ||||| |||| |||||||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||| ||||||||| ||||||||| |||||||||||| ||| |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 73 aatgaatctagatat 87
|||||||||||||||
Sbjct: 73 aatgaatctagatat 59
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtatgt 181
|||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatgt 2
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| ||| ||||||||| | |||||||||||||||||||| ||||| |||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 122 cggagggagta 132
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 74 atgaatc 80
|||||||
Sbjct: 65 atgaatc 71
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 74 atgaatc 80
|||||||
Sbjct: 78 atgaatc 72
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacaga 171
||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||| ||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 172 ggaagta 178
|| ||||
Sbjct: 11 gggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacaga 171
||||||||| ||||||||||||| | |||||||||||||||||||||||| | |||| ||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 172 ggaagta 178
|| ||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 137/166 (82%), Gaps = 11/166 (6%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| ||||||||||||||||||||| | ||||||||||| |||| |
Sbjct: 159 gtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggt 100
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||| | |||| || ||| |||||||||||||||||| |||||
Sbjct: 99 aatgaatctaaacatat--gtc---------tatatctagattcattaacatctatatgc 51
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||| || || |||||||||||||||||| | |||| |||||||||
Sbjct: 50 atatgggtaaggctagaatgacttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| |||| || | || || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 74 atgaatctagatata 88
|||||||||||||||
Sbjct: 65 atgaatctagatata 79
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 101 bits (51), Expect = 3e-21
Identities = 138/166 (83%), Gaps = 12/166 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || | |||||||||||||| |||||||||||
Sbjct: 97 atgaatctagacata-tat----------atctatctagattcattaatatcaatatgaa 49
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | ||||| ||||||| |||||||||||||||| |||| |||||
Sbjct: 48 tgtgggaaa-actagaataacttacattgtaaaacggagggagtat 4
Score = 101 bits (51), Expect = 3e-21
Identities = 138/166 (83%), Gaps = 12/166 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||| ||||||||||| ||| ||| |||| ||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 64 atgaatctagatagat---------at--atatgtctagattcattaacatcaatatgaa 112
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | | |||| |||||||||||||||||| |||| |||| |||||
Sbjct: 113 tgtggaaaatattagaatgacttacattgtgaaacggagggagtat 158
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||| ||||||||| ||||||||| |||||||||||| ||| |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 73 aatgaatctagatat 87
|||||||||||||||
Sbjct: 64 aatgaatctagatat 78
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtatgt 181
|||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatgt 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| ||| ||||||||| | |||||||||||||||||||| ||||| |||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 101 bits (51), Expect = 3e-21
Identities = 81/90 (90%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 92 ttctcacattcatat--gtctagattcattaacatcaatatgaatataggaaatgctaga 149
||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||
Sbjct: 93 ttctcacattcatatttgtctagattcattaacatcaatatgaatgtgagaaatactaga 34
Query: 150 atgacttacattgtaaaacagaggaagtat 179
|||||||||||| | |||| ||||||||||
Sbjct: 33 atgacttacattatgaaacggaggaagtat 4
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
||||||||| ||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 126 aatatgaatataggaaatgctagaatgacttacatt 161
||||||||| | |||||||||||||||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacatt 113
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgta 164
||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct: 63 atgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtg 122
Query: 165 aaacagaggaagtat 179
|||| ||||||||||
Sbjct: 123 aaacggaggaagtat 137
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 74 atgaatctaga 84
|| ||||||||
Sbjct: 76 ataaatctaga 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattca 62
||||| |||| |||||||||||||||| ||| ||| ||||| ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| ||||||| ||||||||||| |||| |||||||||
Sbjct: 45 ggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 135/165 (81%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| |||||||| | || ||||||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 98 atgaatctaga-----------cacatatatatgtctagattcattaacatctatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | || ||| |||||| |||||||||| | |||| |||||||||
Sbjct: 49 tgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 133/165 (80%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| |||||||||| || ||| ||| | ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| ||| ||| || |||||||||||||||||||| |||||||
Sbjct: 65 atgaatctagacata-tat----------atgtgtctagattcattaacatctatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | |||||||||| | |||||||| | |||| |||| ||||
Sbjct: 114 tatgagcaatgctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
|||||||||||||||||||||||| | |||||||||||||||||||||||| |||| |||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 173 gaagta 178
||||||
Sbjct: 10 gaagta 5
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 74 atgaat 79
||||||
Sbjct: 65 atgaat 70
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacatt 161
|||||||||||||||| | ||||||||||||||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacatt 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||| ||| |||||| ||||||||||||| |||||||| || ||||||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 136/165 (82%), Gaps = 11/165 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||||| || ||| || ||||||||||||| || |||||| ||||||||||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||||||||||| || | ||||||||||||||||||| | |||||||
Sbjct: 65 atgaatctagatatat---------at--agatgtctagattcattaacacctatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | |||||||||||||||||||||||| |||| |||| ||||
Sbjct: 114 tgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 5e-20
Identities = 123/148 (83%), Gaps = 11/148 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| ||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| || ||| |||| |||||||||||||||| | |||||||
Sbjct: 98 atgaatctagacat-ctat----------atatatctagattcattaacacctatatgaa 50
Query: 134 tataggaaatgctagaatgacttacatt 161
| | ||||||| ||||||||||||||||
Sbjct: 49 tgtgggaaatgttagaatgacttacatt 22
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 135/164 (82%), Gaps = 11/164 (6%)
Strand = Plus / Minus
Query: 15 actccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaa 74
|||||||| |||||| ||||||||||||| ||||||||| ||||||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 75 tgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaat 134
|||||||||| ||| ||| || | | |||||||| |||| || ||||||||
Sbjct: 97 tgaatctagacata-tat----------atctatatagattcactaacctctatatgaat 49
Query: 135 ataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||||||||||||| | |||| |||| ||||
Sbjct: 48 ataggaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 121/148 (81%), Gaps = 11/148 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||||| | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||||| ||| || || ||||||||||||||| |||| || |||||||
Sbjct: 65 gtgaatctatatagat---------at--atatgtctagattcactaacctccatatgaa 113
Query: 134 tataggaaatgctagaatgacttacatt 161
| | ||||||||||||||||||||||||
Sbjct: 114 tgtgggaaatgctagaatgacttacatt 141
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
|||||||||| || ||||||||||||||| | |||||||||||||||||||||||||| |
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 166 aacagaggaagta 178
||| |||||||||
Sbjct: 132 aacggaggaagta 144
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgtt 63
Query: 73 aatgaat 79
||||||
Sbjct: 64 catgaat 70
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 74 atgaatctaga 84
|| ||||||||
Sbjct: 84 ataaatctaga 74
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
|||||| ||||||||||||||| | ||||||||||||||| |||||||||| |||| |||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 173 gaagta 178
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||| ||| |||||||||||||||||||| || |||||| |||||||||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 163 taaaac 168
| ||||
Sbjct: 20 tgaaac 15
Score = 73.8 bits (37), Expect = 8e-13
Identities = 65/75 (86%), Gaps = 7/75 (9%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||| ||| |||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 144 gtactctctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgtt 92
Query: 73 aatgaatctagatat 87
|||||||||||||||
Sbjct: 91 aatgaatctagatat 77
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||| |||||||||||||||||||||||| | ||||| |||||||||||||||||| |||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 168 cagaggaagtat 179
| ||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| || ||||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 74 atgaatctagata 86
|||||| ||||||
Sbjct: 65 atgaatgtagata 77
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||| |||||| ||||||||||||||||| |||| ||| |||||||||||||
Sbjct: 137 gtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 111 agattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacag 170
|||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||| |
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 171 aggaagta 178
||||||||
Sbjct: 12 aggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 74 atgaatct 81
||||||||
Sbjct: 65 atgaatct 72
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||
Sbjct: 139 tgtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgt 80
Query: 72 taat 75
||||
Sbjct: 79 taat 76
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 117 attaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaag 176
|||||||||||||||||| | ||||||||||||||||||||| |||| |||| |||| ||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 177 ta 178
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 139/167 (83%), Gaps = 13/167 (7%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcac-attcatattgatgtt 72
||||||||| |||||||||||||||||||| ||| |||| |||| | |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt-tcactagaaatattgatgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||||| || || ||||||||||||||||||| ||||||||||
Sbjct: 64 aatgaatctagatagat---------at--atatgtctagattcattaatatcaatatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|| | |||||| |||||||| |||||||||| |||| |||| |||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggagtat 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||| |||||||||| | || ||||| |||||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 74 atgaatctagatatat 89
||||||||||||||||
Sbjct: 70 atgaatctagatatat 55
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||| ||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||| ||||||||||||||||||||||||||| | | ||||| |||| |||||||||| |
Sbjct: 55 atatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatgg 114
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 115 tgaaacggagggagta 130
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 135/166 (81%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| ||||||||||||||| | || ||||||| |||| || ||||| || |||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||| | ||||| |||||||||||||||||||||||| | ||||
Sbjct: 64 aatgaatctaaa-----------cacatacatatgtctagattcattaacatctaaatga 112
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||| || ||||||| || | |||||||||| |||| |||||||||
Sbjct: 113 atatgggcaatgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | |||||||||| | || |||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 95.6 bits (48), Expect = 2e-19
Identities = 134/165 (81%), Gaps = 17/165 (10%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||| | ||||| | || ||||||||||||| |||||||||||||
Sbjct: 92 atgagtttagat-----------agatacatatgtctagat------acatcaatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | | |||||||||||||||||||||||| |||| |||||||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
|||||||||||||||||||| | | ||| |||||||||||||||||||| |||| ||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 175 agta 178
||||
Sbjct: 149 agta 152
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 136/166 (81%), Gaps = 11/166 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||| || | |||| || || || ||||||||||| |||| |||||||
Sbjct: 98 atgaatttaaacatat---------at--atgcgtatagattcattagcatctatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||||| ||||| |||||||||||||||||| |||| |||| |||||
Sbjct: 49 tatagaaaatgttagaatgacttacattgtgaaacggagggagtat 4
Score = 73.8 bits (37), Expect = 8e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||| || |||||||| |||| |||||||| | | |||||||||||||||||||||||
Sbjct: 83 atatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgacttacattg 142
Query: 163 taaaacagaggaagtat 179
| |||| |||| |||||
Sbjct: 143 tgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 136/166 (81%), Gaps = 11/166 (6%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||| ||||||| | ||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
|||||| |||||||| || | |||||||||||||||||||| |||||||
Sbjct: 65 atgaatttagatatag---------atg--tgtgtctagattcattaacatctatatgaa 113
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||| || ||||||||||||||||||||| | |||| |||| |||||
Sbjct: 114 tatgggtaatgctagaatgacttacattatgaaacggagggagtat 159
Score = 91.7 bits (46), Expect = 3e-18
Identities = 135/165 (81%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||||||| | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||| | ||||| ||| |||| ||||||||||||| ||||| |
Sbjct: 98 atgaatctaga---------cacacat--ctatatctaaattcattaacatctatatgta 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| | || ||||||||||||||||||||| | |||| |||||||||
Sbjct: 49 tgtgggcaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 93.7 bits (47), Expect = 8e-19
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 92 ttctcacattcatat--gtctagattcattaacatcaatatgaatataggaaatgctaga 149
||||||||||||||| |||||||||||||| | ||||||||| | ||||||||||||
Sbjct: 42 ttctcacattcatatatgtctagattcattagtactaatatgaatgtgggaaatgctaga 101
Query: 150 atgacttacattgtaaaacagaggaagtat 179
|||||||||||||| |||| ||||||||||
Sbjct: 102 atgacttacattgtgaaacggaggaagtat 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 70 atgaatctagacatat 55
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
|||||| |||| |||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||| ||||||||||| |||| |||||||||
Sbjct: 44 gaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 136/166 (81%), Gaps = 11/166 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||| |||| |||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| | ||| ||||||||||||||||| |||| |||||||
Sbjct: 98 atgaatctagata-aatat----------atatgtctagattcattggcatcgatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | | |||||||||||||||||||||| | |||| |||| |||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| |||||||| ||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 134/165 (81%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || ||| ||| | ||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||| ||| ||| |||||||||||||||||||||||| | |||||
Sbjct: 98 atgaatctaaata-----------catacatatgtctagattcattaacatctaaatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| || |||||||||| | |||||||||| |||| |||||||||
Sbjct: 49 tatgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || ||||||| | || |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
Score = 44.1 bits (22), Expect = 7e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| ||||| | | || ||| |||||| | |||||||||| ||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 170 gaggaagtat 179
|||| |||||
Sbjct: 150 gagggagtat 159
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 93.7 bits (47), Expect = 8e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgt 62
Query: 72 taa 74
|||
Sbjct: 63 taa 65
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
||||||||||| |||||||| | |||||||||||||||||||||||||| |||| |||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 175 agtatgt 181
|||||||
Sbjct: 127 agtatgt 133
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 74 atga 77
||||
Sbjct: 70 atga 67
Score = 73.8 bits (37), Expect = 8e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 118 ttaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagt 177
|||||||| |||||||| | |||||||||||||||||||||||||| |||| |||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 178 a 178
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||| ||||||||||| | ||||||||||| |||||||||||| |||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 124 cggaggaagta 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| ||||||||||||||||| || |||||||| || ||||||||| |||||
Sbjct: 135 gtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtt 76
Query: 73 aatgaatctagat 85
|||||||||||||
Sbjct: 75 aatgaatctagat 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||| |||||| ||||||||||||| || ||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
||||||||| |||||||||||| | |||||||||||||||||||||||||| |||| |||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 173 gaagta 178
||||||
Sbjct: 121 gaagta 126
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 74 atgaat 79
||||||
Sbjct: 66 atgaat 61
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
|||||||||| |||||||||||||||||||| ||||||||| ||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| || ||||| |||| |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 74 atgaatctag 83
||||||||||
Sbjct: 71 atgaatctag 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
|||||||||||| |||||||||||| | ||||| |||||||||||||||||| ||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 169 agaggaagtatg 180
|||| ||||||
Sbjct: 122 ggagggagtatg 133
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgta 164
|||| ||||||||||||||||||||||||| | ||| |||||||||||||||| |||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 165 aaacagaggaagta 178
|||| |||||||||
Sbjct: 119 aaacggaggaagta 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| |||||| || |||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 74 atgaatcta 82
|||||||||
Sbjct: 72 atgaatcta 64
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 120 aacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||| | | |||||||||||||||||||||||| |||| |||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||| | ||||||||||||||||||||||||| |||| |||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcat 50
||||||||| |||||||||||||||||| | ||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 89.7 bits (45), Expect = 1e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||| |||| |||||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatg 60
Query: 71 ttaatgaat 79
|||||||||
Sbjct: 61 ttaatgaat 69
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
||||||||||||||||||| || | | |||||||||||||||||||||||| |||| |||
Sbjct: 69 attcattaacatcaatatggatgt-gaaaatgctagaatgacttacattgtgaaacggag 11
Query: 173 gaagta 178
||||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 18 ccctctgtttcacaatgtaagtcattttagcatttctcacattcat 63
||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt-tcacattcat 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 140 aaatgctagaatgacttacattgtaaaacagagg 173
|||||||||||||||||||||||| |||| ||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggagg 107
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||||||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 74 atgaatctagata 86
|| ||| ||||||
Sbjct: 65 ataaatttagata 77
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||| | |||||||||||||||||||| ||||| |||| ||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||| |||| |||||||||| ||||||||| ||||||||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||| ||| ||||| |||||||| ||| | |||||||||||||||||||||||||| |||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 122 catcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||||||||||||| | ||||| ||||||||||||||||||| |||| |||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| |||||||| |||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 70 atgaatctagata 58
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||
Sbjct: 3 tgtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 92 ttctcacattcatatgt--ctagattcattaacatcaatatgaatataggaaatgctaga 149
||||||||||||||| | |||||||||||||||||||||| | | ||||||||||
Sbjct: 42 ttctcacattcatatctatctagattcattaacatcaatatatacgtgaaaaatgctaga 101
Query: 150 atgacttacattgtaaaacagaggaagta 178
|||||||||||||| |||| |||||||||
Sbjct: 102 atgacttacattgtgaaacggaggaagta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||| ||||||||||||||||||| |||| |||| ||||
Sbjct: 44 gaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 114 ttcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagg 173
||||||||||||||||||||| | ||||||||||||||||||| |||||| |||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 174 aagta 178
|||||
Sbjct: 9 aagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 atgaa 78
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||||||| |||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 74 atgaatcta 82
|||||||||
Sbjct: 70 atgaatcta 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||| |||||||||||||||||||||| | |||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 73.8 bits (37), Expect = 8e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
||||||||||||||||||||||||| | | |||| ||| ||||||||| ||||| ||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 170 gaggaagta 178
|||||||||
Sbjct: 122 gaggaagta 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||| | | |||| | | ||||||||||||||| |||| |||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| |||||||| |||| || ||||| ||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 70 atgaatctagata 58
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||| |||||||||| ||||||||| ||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||||||||||||||||| | ||||| ||||||| |||||||| | |||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 120 cggaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 127 atatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||| | |||||||||||||||||||| ||||| |||| |||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||||||||||||||||||| || |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 74 atga 77
||||
Sbjct: 65 atga 68
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||| | |||| ||||||||||||||||||||| ||||||||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
|||||||||||||||||||| | | || ||||| ||||||||||||| | |||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 175 agta 178
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||| |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 83.8 bits (42), Expect = 8e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattt-tagcatttctcacattcatattgatgtt 72
||||||||| ||||||||||||||||| | || |||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 73 aatgaatctagata 86
||||||||||||||
Sbjct: 65 aatgaatctagata 78
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||| |||| |||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctaga-atgacttacattgtaaa 166
||||||||||||||||||||||||||| | ||||||| |||| |||||||||||| ||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 167 acagaggaagta 178
|| |||| ||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| |||||||| | || |||||||||| ||||||||||
Sbjct: 80 atatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatta 21
Query: 163 taaaacagaggaagta 178
| |||| |||||||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||| |||||||||| || ||||||| | ||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 73 aatgaatctagatatat 89
|||||||||||| ||||
Sbjct: 64 aatgaatctagacatat 80
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 107 gtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaa 166
|||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| | ||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 167 acagaggaagta 178
|| |||| ||||
Sbjct: 125 acggagggagta 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| ||| ||||| || ||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 122 catcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||| ||||| ||||||| ||||||||||| |||| |||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||| |||| |||||||||||||||| ||| ||| |||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| ||||||||||||| ||||||| | |||||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtt 63
Query: 73 aatgaatctaga 84
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
|||||||||||||||||||| |||||||| | || ||||||||||||||||||||| | |
Sbjct: 77 tgtctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatga 18
Query: 166 aacagaggaagta 178
||| |||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||||||||||||||| ||||||||||||| |||||||| ||||||||| | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 74 atgaatctagatatat 89
|||||||||| ||||
Sbjct: 98 gtgaatctagacatat 83
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| |||||||||||| ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 74 atgaatcta 82
||||||||
Sbjct: 65 gtgaatcta 73
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| ||| |||| ||| ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 74 atgaatctagat 85
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 74 atgaatctagat 85
|||||| |||||
Sbjct: 86 atgaatttagat 75
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||| |||||||| ||||||||||||| ||| |||||||||||||| ||||||||| |||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 136 cggagggagta 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| ||||||||| ||||| |||| ||||||||||||||||||| |||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 168 cagaggaagtat 179
| |||| |||||
Sbjct: 15 cggagggagtat 4
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | ||||| |||| | |||||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||||||||
Sbjct: 98 atgaatctagatatat 83
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | | ||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||| |||| |||||||||| ||||||||| ||| |||||||| ||| |||||||||
Sbjct: 2 ttgtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatg 61
Query: 71 ttaatgaatctagata 86
|||||||||||||||
Sbjct: 62 ataatgaatctagata 77
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| ||||||||| ||||| ||||| ||||||||||||| ||||| |||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttc 53
||||||||||| |||||| ||||||||||||| |||||||||
Sbjct: 130 tgtactccctccgtttcataatgtaagtcattgtagcatttc 89
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||||||||||||||||| | | ||||| |||||||||||| |||
Sbjct: 64 atatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatta 123
Query: 163 taaaacagaggaagta 178
| |||| |||||||||
Sbjct: 124 tgaaacggaggaagta 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| ||| ||||||||| || ||||| |||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 79 atgaatctagacatat 64
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| |||||||| ||||||| || |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||| | |||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 35 taagtcattttagcatttctcacattcatattgatgttaatgaatctagatatat 89
||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatat 50
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 31 aatgtaagtcattttagcatttctcacattcatattgatgttaatgaat 79
||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat 49
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgactta 157
|||||||||||||||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 50 atatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
|||||||| ||||||||||||| | |||||||||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 135/166 (81%), Gaps = 11/166 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| || ||| |||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||||||| || || ||||||||||||||||| |||| |||||||
Sbjct: 98 atgaatctagatagat---------at--atatgtctagattcattggcatcgatatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
| | | |||||||||||||||||||||| | |||| |||| |||||
Sbjct: 49 tgtggaaaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| |||||||| ||||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||||||||||||||| ||||||| ||||| ||||||| | ||||| ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 72 atgaatctaga 62
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 107 gtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaa 166
||||||||||||||||||| ||||| || | || ||||||||||||| ||||||| | ||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 167 acagaggaagtat 179
||||||| |||||
Sbjct: 121 acagagggagtat 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 127 atatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||| |||| || ||||||||||||||||||||| | |||| |||||||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatt 51
|||| |||| |||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 85.7 bits (43), Expect = 2e-16
Identities = 105/123 (85%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatctagatatattat-tc 94
|||||||| ||||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatggttaatgta 60
Query: 95 tc-acattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatga 153
|| | || || | ||||||| ||||||||||||||||||| | ||||||||||||||||
Sbjct: 61 tctagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Query: 154 ctt 156
|||
Sbjct: 121 ctt 123
Score = 83.8 bits (42), Expect = 8e-16
Identities = 105/124 (84%), Gaps = 4/124 (3%)
Strand = Plus / Minus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatctagatatattattct 95
|||||||| ||||||||| |||||||||||||||||||||| ||||||||| || |||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 96 ---cacattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatg 152
||||| | ||||||| ||||||||||||||||||| | |||||||||||||||
Sbjct: 63 agatacatt-aaccatctagatacattaacatcaatatgaatgtgggaaatgctagaatg 5
Query: 153 actt 156
||||
Sbjct: 4 actt 1
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||| |||||||||||||| | |||||||| ||||||||| ||||
Sbjct: 57 atatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattg 116
Query: 163 taaaacagaggaagt 177
| |||| ||||||||
Sbjct: 117 tgaaacggaggaagt 131
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 19 cctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaa 78
|||| |||||||||| |||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 79 tctagatatat 89
|||||| ||||
Sbjct: 67 tctagacatat 57
Score = 67.9 bits (34), Expect = 5e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacagagaaagtat 4
Score = 67.9 bits (34), Expect = 5e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 20 ctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
|||||||||||||||||||||||| ||||||||| | |||||||||
Sbjct: 11 ctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 120 aacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||| | |||||||||||||||||||||||| |||| |||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 74 atgaatcta 82
|||||||||
Sbjct: 64 atgaatcta 72
Score = 69.9 bits (35), Expect = 1e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgta 164
|||| ||||||||| ||||||||||||||| | | |||||||||||| |||||||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 165 aaacagaggaagtat 179
|||| |||| |||||
Sbjct: 18 aaacggagggagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||| |||| |||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 74 atg 76
|||
Sbjct: 65 atg 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 116 cattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaa 175
||||||||| ||||| ||| | ||||||||||||||||||||||||| |||| ||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 176 gta 178
|||
Sbjct: 7 gta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 141 aatgctagaatgacttacattgt 163
|||||||||||||||||||||||
Sbjct: 64 aatgctagaatgacttacattgt 86
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatt 51
|||||| || ||| |||||||||||||||| |||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||| |||||||||||||||| ||||||||| || ||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgt 163
|||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgt 20
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||| |||| ||||||||||||||| |||| ||||||||| |||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||| | ||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 83.8 bits (42), Expect = 8e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| ||||||||||||| |||||||||||||| ||| ||| |||||||| |
Sbjct: 107 gtactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatact 48
Query: 73 aatgaatctagata 86
||||||||||||||
Sbjct: 47 aatgaatctagata 34
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgt 163
||||||||||||| |||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgt 91
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 149 aatgacttacattgtaaaacagaggaagtat 179
||||||||||||||| |||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagtat 4
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcatt 43
|||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 83.8 bits (42), Expect = 8e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattga 68
||||||||| ||||| ||||||||||||| ||| |||| |||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||| | |||| ||| ||||||||||||||| |||| |||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 8e-16
Identities = 135/167 (80%), Gaps = 13/167 (7%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||| |||||||||| || ||||||| | ||||||||||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||||| |||| |||||||||||||||||||||||| | ||||
Sbjct: 64 aatgaatctaga-----------caca--catatgtctagattcattaacatctagatga 110
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||||| | ||||||| || | |||||||| | |||| |||| |||||
Sbjct: 111 atataagcaatgctacaaagtcttacattatgaaacggagggagtat 157
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
|||||||||||||||||||| |||||||| | || |||||||||| |||||||||| | |
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 166 aacagaggaagta 178
||| |||||||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 83.8 bits (42), Expect = 8e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| ||||||||||| ||| ||||||||| |||||||| |||||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 65 atgaatctagata 77
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| ||||| ||||||| | | |||||||||||||||||| ||| | |||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 168 cagaggaagtat 179
||||||||||||
Sbjct: 15 cagaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||| | |||||||||| ||||||||||||| | |||| |||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 83.8 bits (42), Expect = 8e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||||||||||||| ||| |||||||| |||| | |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
||||||||||||||||||||| | | | | |||||||||||| ||||||||||| ||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 13 gagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcat 42
||||||||| |||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 8e-16
Identities = 135/167 (80%), Gaps = 13/167 (7%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat--gt 71
||||||||| ||||||||||||||| | |||||||||| ||||||| ||||| || ||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 72 taatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatg 131
||||||||||| | ||||| ||||||| |||||||||||||||| | |||
Sbjct: 100 taatgaatctaaa-----------cacatacatatgtttagattcattaacatctaaatg 52
Query: 132 aatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||| | || |||||||||| | |||||||||| ||||||||| ||||
Sbjct: 51 aatgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||||||||||||||||||| | || ||||||| | ||||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 83.8 bits (42), Expect = 8e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
||||||||||||||||||||||||||||||| |||||||||| | |||||||| | ||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 169 agaggaagta 178
|||| ||||
Sbjct: 14 ggagggagta 5
Score = 73.8 bits (37), Expect = 8e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| |||||||| | || ||||||| | | |||||||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtt 63
Query: 73 aatgaatctagatatat 89
||||||||||| |||||
Sbjct: 64 aatgaatctaggtatat 80
Score = 58.0 bits (29), Expect = 5e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
||||||||||||||||||| |||||||| | | |||||||||| | |||||||| | |
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 166 aacagaggaagta 178
||| |||||||||
Sbjct: 144 aacggaggaagta 156
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 8e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| |||||||| ||| |||||||||| | ||||||||
Sbjct: 80 atatgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacatta 21
Query: 163 taaaacagaggaagtatg 180
| |||| |||||||||||
Sbjct: 20 tgaaacggaggaagtatg 3
Score = 58.0 bits (29), Expect = 5e-08
Identities = 67/77 (87%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatt-tctcacattcatattgatgtt 72
|||| |||| |||||| |||||||| | || ||||||| ||| |||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtct-acattcatatagatgtt 63
Query: 73 aatgaatctagatatat 89
|||||||||||| ||||
Sbjct: 64 aatgaatctagacatat 80
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
||||| |||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||| ||||||||| |||||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 74 atgaa 78
|||||
Sbjct: 61 atgaa 57
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 114 ttcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagg 173
||||||||||||| ||| ||| | |||||||||||||||||||| ||||| |||| ||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 174 aagtat 179
|||||
Sbjct: 117 gagtat 122
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 126 aatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||| | |||||||||| ||||||||||||||| |||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| |||||||||| |||||||||||||||||| |||||||||| |||||||
Sbjct: 139 tgtacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgt 80
Query: 72 ta 73
||
Sbjct: 79 ta 78
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 17 tccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatg 76
|||||| |||||||||| ||||||||| |||||||||||| || |||||||| ||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 77 aatctagatata 88
|||||| |||||
Sbjct: 68 aatctacatata 79
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||| |||||||| |||| ||||||||||||||||||| ||||| ||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 170 gagg 173
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 83.8 bits (42), Expect = 8e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 74 at 75
||
Sbjct: 65 at 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 104 tatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgt 163
||||| || ||| |||||||||||||||||| | | |||| ||| |||||||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 164 aaaacagaggaagta 178
|||| |||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcatt 43
||||||||| ||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| |||||||| |||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 74 atgaat 79
||||||
Sbjct: 71 atgaat 66
Score = 73.8 bits (37), Expect = 8e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcattt 52
||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
|||||||||||||||||| || | |||||||||||||||||||||||| |||| |||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 173 gaagtat 179
|||||||
Sbjct: 126 gaagtat 132
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||| ||||||||||||||| |||| |||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| |||||||| | | |||||||||||||||||||||
Sbjct: 57 atatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacatta 116
Query: 163 taaaacagaggaagtat 179
| ||| ||||||||||
Sbjct: 117 tgaaatggaggaagtat 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 25 tttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaatctaga 84
||||| ||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaagtcattctagcattgcacacattcatatagatgttaatgaatctaga 62
Query: 85 tatat 89
||||
Sbjct: 61 catat 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 127 atatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||||||||||||| ||||||||||||||||||||| | |||| |||| |||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatt 51
||||||||| |||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 122 catcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||| | |||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||| |||||||||||||| |||| ||||
Sbjct: 67 ggaaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||| |||||| ||||||||| || ||||||||| ||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 74 atgaatcta 82
|||||||||
Sbjct: 98 atgaatcta 90
Score = 73.8 bits (37), Expect = 8e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||| ||||||||||| ||||||||||||||| |||||| |||||||||||| ||||
Sbjct: 83 atatgtttagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattg 142
Query: 163 t 163
|
Sbjct: 143 t 143
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 74 atgaatctagata 86
|| ||| ||||||
Sbjct: 65 ataaatttagata 77
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||| | |||||||||||||||||||| ||||| |||| ||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||| |||| |||||||||| ||||||||| ||||||||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||| ||| ||||| |||||||| ||| | | |||||||||||||||||||||||| |||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 168 cagaggaagta 178
| |||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||||||||||||| |||||||| |||| | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 74 atgaatcta 82
|| ||||||
Sbjct: 79 ataaatcta 71
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
|||||||||| |||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||| |||||||||||||| | | | | |||||||||||||||||||||||| ||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 131 gagggagta 139
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| ||| ||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 74 atgaatctagata 86
|||||||||||||
Sbjct: 65 atgaatctagata 77
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
||||||||||||| |||||||||||| | |||||| ||||||||||||| ||||| |||
Sbjct: 75 tctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaa 16
Query: 168 cagaggaagta 178
| |||||||||
Sbjct: 15 cggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| | |||||| |||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 74 atgaatctaga 84
||| |||||||
Sbjct: 95 atggatctaga 85
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa
Japonica Group
Length = 155
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 74 atgaa 78
|||||
Sbjct: 65 atgaa 69
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||||||||||||| ||| ||||| |||||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 74 atgaa 78
|||||
Sbjct: 91 atgaa 87
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 114 ttcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagg 173
||||||||||||||||| ||| | |||||| ||||||||||||||||||| |||| ||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 174 aagta 178
|||||
Sbjct: 147 aagta 151
Score = 67.9 bits (34), Expect = 5e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 114 ttcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagg 173
||||||||||||||||||||| | |||||| |||||||||||| ||||| |||| ||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 174 aagtat 179
|||||
Sbjct: 9 gagtat 4
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| ||||||||||| ||| |||||| || ||||||| |||| |||||||| |||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 74 atgaatctagat 85
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaa 167
|||||||||||||||||| |||||||||| | |||||||||| |||||| ||| | |||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 168 cagaggaagta 178
|||||||||||
Sbjct: 15 cagaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||| ||| |||| | || ||||||| | || |||||||| ||||
Sbjct: 142 tgtactccctccgtttcataatataagactttctagcattacccatattcatatagatgc 83
Query: 72 taatgaatctagat 85
||||||||||||||
Sbjct: 82 taatgaatctagat 69
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctagaa 150
||||||||||||| |||| |||||||||| || ||||||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaa 112
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | |||||| ||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
|||||||||||||||||||||||| |||||||| | | ||| ||| || | ||||||||
Sbjct: 82 catatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacatt 141
Query: 162 gtaaaacagaggaagtat 179
|| |||| |||| |||||
Sbjct: 142 gtgaaacggagggagtat 159
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| ||| |||| | || ||| ||| | || |||||||| ||||||
Sbjct: 4 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 63
Query: 73 aatgaatctagatatat 89
|||||| ||||||||||
Sbjct: 64 aatgaacctagatatat 80
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| ||||||||||||||| |||||||||||| |||| || ||||| |||||
Sbjct: 139 tgtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgt 80
Query: 72 taatgaat 79
||||||||
Sbjct: 79 taatgaat 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
||||||||||||| ||||| |||| | ||||||| |||| |||||||||| |||| |||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 173 gaagta 178
||||||
Sbjct: 132 gaagta 137
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcat 63
||||||||||| |||||||||||||||||||||||||||||| | |||||||
Sbjct: 3 tgtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||||||||||||| |||| ||||||||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagtat 109
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcattt 52
|||| |||| |||||||||||||||||||| ||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattt 70
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||| ||||||||||||||| |||| |||| ||||
Sbjct: 45 ggaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| |||||||||| || ||| |||||| | |||||||||
Sbjct: 83 atatgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattg 142
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 143 tgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || ||| ||| | || |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||||||||||||||| |||||||| | || ||||||| ||||||||||| ||||||
Sbjct: 133 gtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtt 74
Query: 73 aatgaatctaga 84
||||||||||||
Sbjct: 73 aatgaatctaga 62
Score = 67.9 bits (34), Expect = 5e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgta 164
||||||||||||||||||||| |||||||| | | |||||||||| | |||||||| |
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 118
Query: 165 aaacagaggaagta 178
||||||||| ||||
Sbjct: 119 aaacagagggagta 132
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || ||| ||| | ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| |||||||| | || ||| |||||| | |||||||||
Sbjct: 83 atatgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattg 142
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 143 tgaaacggagggagta 158
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
|||||| |||| ||||||||||||||| |||||||||||| |||| || ||||| |||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgt 62
Query: 72 taatgaat 79
||||||||
Sbjct: 63 taatgaat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
||||||||||||| ||||| |||| | ||||||| |||| |||||||||| |||| |||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 173 gaagta 178
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| ||||||||| |||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 74 atgaatct 81
||||||||
Sbjct: 75 atgaatct 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 111 agattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacag 170
||||||||||| |||||| ||||| | |||||||||||||||||||| ||||| |||| |
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 171 aggaagta 178
||||||||
Sbjct: 128 aggaagta 135
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
||||||| |||||| ||||| | ||||||||||||||||||| ||||| |||| ||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 175 agta 178
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||| ||||||||| |||||||| | || |||||||||| | |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 163 taaaacagaggaagta 178
| |||| |||||||||
Sbjct: 119 tgaaacggaggaagta 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || ||||||| | ||||||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 74 atgaatctagatatat 89
|| |||||||| ||||
Sbjct: 74 ataaatctagacatat 59
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||||| |||||| | |||||| | || ||||||| ||||||||||||
Sbjct: 3 tgtactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | |||||| ||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
|||||||||||||||||||||||| |||||||| | | ||| ||| || | ||||||||
Sbjct: 81 catatgtctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacatt 22
Query: 162 gtaaaacagaggaagtat 179
|| |||| |||| |||||
Sbjct: 21 gtgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| ||| |||| | || ||| ||| | || |||||||| ||||||
Sbjct: 159 gtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtt 100
Query: 73 aatgaatctagatatat 89
|||||| ||||||||||
Sbjct: 99 aatgaacctagatatat 83
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 28 cacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaat 79
||||||| |||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcat 63
|||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgt 163
|||||||| ||||||||||||| | |||||||||| |||||||| ||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgt 99
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||| ||||||||| |||| |||| ||||
Sbjct: 44 gaaatgctagaatgagttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 10 cttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||||||| |||||| | | |||| | || ||||||| | ||||||||||| |||
Sbjct: 163 cttgtactccctccgtttcagattataagactttctagcattgcccacattcatatagat 104
Query: 70 gttaatgaatctagatatat 89
||||||||||||||||||||
Sbjct: 103 gttaatgaatctagatatat 84
Score = 58.0 bits (29), Expect = 5e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaa 150
||||| |||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 83 catatatctagattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||| | |||||||||||||||||||| ||||| |||| |||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 124 tcaatatgaatataggaaatgctagaatgacttacattgt-aaaacagaggaagta 178
||||||||||| | |||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 25 tttcacaatgtaagtcattttagcatttctcacattcatattga 68
||||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 132/165 (80%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || ||||||| ||||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 74 atgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatgaa 133
||||||||| | ||| | |||||||||| ||||||||||||| | |||||
Sbjct: 98 atgaatctaaa-----------cacgtacatatgtctatattcattaacatctaaatgaa 50
Query: 134 tataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
| |||| ||| || || | ||||||||||||||| |||||||||
Sbjct: 49 tgtaggcaatattaaaaagtcttacattgtaaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| ||||| || | | |||||||||| | |||||||||| ||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 170 gaggaagta 178
|||||||||
Sbjct: 150 gaggaagta 158
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||| |||||||| | || ||||||| | ||||||||||| |||||
Sbjct: 142 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 83
Query: 72 taatgaatcta 82
|||||||||||
Sbjct: 82 taatgaatcta 72
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| |||||||| | || |||||||||| | |||||||| | ||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttct 54
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcatttct 45
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcata 64
|||| |||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 128 tatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||| | |||||||||||||||||||||||||| |||| |||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||| |||||| ||||||||||||| || |||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||| ||||||| ||| |||| | | ||||| ||||||||||||||||
Sbjct: 63 atatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatta 122
Query: 163 taaaacagaggaagta 178
|||||| |||| ||||
Sbjct: 123 taaaacggagggagta 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||| | ||||||||||||| || ||||| ||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 74 atgaatctagatatat 89
|||||||||| ||||
Sbjct: 78 gtgaatctagacatat 63
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 121 acatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||| |||||||| | |||||| |||||||||||||||| | |||| |||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 73.8 bits (37), Expect = 8e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 24 gtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaatctag 83
|||||||||| |||||||||||||||||| ||| ||| | ||| ||||||||||||||||
Sbjct: 15 gtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctag 74
Query: 84 a 84
|
Sbjct: 75 a 75
Score = 63.9 bits (32), Expect = 7e-10
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 95 tcacattcatat--gtctagattcattaacatcaatatgaatataggaaatgctagaatg 152
|||||||||||| |||||||||||||||||| ||| | ||||| |||||||| ||||
Sbjct: 90 tcacattcatatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatg 31
Query: 153 acttacattgtaaaacagaggaagtat 179
||||| ||||| |||| || |||||||
Sbjct: 30 acttatattgtgaaacggaagaagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 18 ccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||| |||||||||| |||||||||||| ||||| ||||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 73.8 bits (37), Expect = 8e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| | |||||| | | |||||||||| | |||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattg 21
Query: 163 taaaacagaggaagtat 179
| |||| ||||||||||
Sbjct: 20 tgaaacggaggaagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || ||||||| ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 73.8 bits (37), Expect = 8e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
|||| |||| |||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcatttta 46
|||||||||| |||||||||||||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatttta 37
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 126 aatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||| | |||||| ||| ||||||||||||||| |||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 73.8 bits (37), Expect = 8e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||| | | |||||||||||| ||||||||||| |||| |||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 5e-08
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||| | | |||||||||||| ||||||||||| |||| |||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 73.8 bits (37), Expect = 8e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 115 tcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagagga 174
||||| |||||||||| ||| | ||||||||||||||||||| |||||||||| |||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 175 agtat 179
|||||
Sbjct: 90 agtat 94
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||| ||||| ||||||||| |||||||||||||||| |||||||||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 74 atga 77
||||
Sbjct: 33 atga 30
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 73.8 bits (37), Expect = 8e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || ||||||| | | ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 74 atgaatcta 82
|||||||||
Sbjct: 98 atgaatcta 90
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| |||||||| || |||||||||| | |||||||||| ||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 150 gagggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| |||||||| | || ||||||| | |||||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 8e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||| ||||||||||||||| |||||||| | || ||||||||||||||||| |||
Sbjct: 80 atatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatatta 21
Query: 163 taaaacagaggaa 175
| |||| ||||||
Sbjct: 20 tgaaacggaggaa 8
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 19 cctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaa 78
|||| |||||| ||| ||||||||| ||||||| | ||||||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 79 tct 81
|||
Sbjct: 70 tct 72
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 81/96 (84%), Gaps = 5/96 (5%)
Strand = Plus / Minus
Query: 55 cacattcatattgatgttaatgaatctagatatattattctcacattcatatgtctagat 114
||||||||||| |||||||||||||||||| | |||| | || ||||| |||||||
Sbjct: 95 cacattcatatggatgttaatgaatctagacacattaatatc-----catatatctagat 41
Query: 115 tcattaacatcaatatgaatataggaaatgctagaa 150
||||||||||| |||||||| | || ||||||||||
Sbjct: 40 tcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 76/90 (84%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagatatattattctcacattcat 104
||||||| | ||||||||||| ||||||||||||||||||||||| | ||| ||
Sbjct: 8 tagcattgcccacattcatatggatgttaatgaatctagatatat-----ggatattaat 62
Query: 105 atgtctagattcattaacatcaatatgaat 134
|||||||||||||||||||| ||||||||
Sbjct: 63 gtgtctagattcattaacatccatatgaat 92
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 96 cacattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatgact 155
||||| ||||||||||||||||||| |||| | |||||| | || |||||||||| | ||
Sbjct: 76 cacatacatatgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtct 135
Query: 156 tacattgtaaaacagaggaagtat 179
|||||||| |||| |||| |||||
Sbjct: 136 tacattgtgaaacggagggagtat 159
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || ||||||| | || |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 98 atgaatctagacatat 83
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
||||||||||||||| ||||| || | || |||||||||| | |||||||||| ||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 170 gaggaagta 178
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattga 68
|||||||||| |||||||||||||||||||| ||||||||| ||| || |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 141 aatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||| ||||| |||| || ||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 58.0 bits (29), Expect = 5e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||| | | |||||||||||| ||||||||||| |||| |||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||| | | |||||||||||| ||||||||||| |||| |||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 132/166 (79%), Gaps = 11/166 (6%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| ||||||||||||||| | || ||||||| || || ||||| ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtt 100
Query: 73 aatgaatctagatatattattctcacattcatatgtctagattcattaacatcaatatga 132
|||||||||| |||||| || ||||||||||||||||||| | | ||||
Sbjct: 99 aatgaatctaaatatata-----------cacatgtctagattcattaacaactaaatga 51
Query: 133 atataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|| | || |||||||||| | |||||||||| |||| |||||||||
Sbjct: 50 atgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || ||||||| | ||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| ||||| |||| | |||||||||| | |||||||||| ||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 170 gaggaagta 178
|||| ||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatat 65
||||||||| |||||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacatt 60
||||||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagtatgt 181
|||||||||||||||||||||||||| |||| |||| |||||||
Sbjct: 109 ggaaatgctagaatgacttacattgtgaaacggagggagtatgt 152
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||||||||||||||| |||| |||| |||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 24 gtttcacaatgtaagtcattttagcatttctcacattcatat 65
|||||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 96 gtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 138 ggaaatgctagaatgacttacattgtaaaac 168
|||||||||||||||||||||||||| ||||
Sbjct: 66 ggaaatgctagaatgacttacattgtgaaac 96
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgat 69
||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc-cacattcatattgat 59
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattga 68
|||| |||| |||||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 124 tcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||| | |||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 58.0 bits (29), Expect = 5e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 123 atcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||| | |||||||||||||||||||| ||||| |||| |||| |||||
Sbjct: 59 atcaatatgaatgt-ggaaatgctagaatgacttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacat 59
|||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||||| |||| |||| ||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatt 51
||||||||| |||||||||||||| ||||| |||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 141 aatgctagaatgacttacattgtaaaacagaggaagtat 179
||||||||||||| ||||||||| |||| |||| |||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagtat 96
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||| | |||||||||| | ||||||||||| |||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 74 atgaatctaga 84
|||||| ||||
Sbjct: 82 atgaatttaga 72
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||| |||||||| | || ||||||| | ||||||||||| |||||
Sbjct: 3 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgcta 147
|||||| ||||||||||||| |||||||| | || |||||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgcta 111
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||| ||| ||||||| ||||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 74 atgaatctaga 84
|| ||||||||
Sbjct: 77 ataaatctaga 67
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 104 tatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgt 163
|||||||||||| ||||||||| |||||||| | | ||||||||||| ||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 164 aaaacagaggaagtat 179
|||| |||| |||||
Sbjct: 123 gaaacggagggagtat 138
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 141 aatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||| ||||||||| | |||| |||||||||
Sbjct: 42 aatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| |||||||| | || ||||||| | ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 74 atgaatctaga 84
|||||| ||||
Sbjct: 65 atgaatttaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
|||||| ||||||||||||| |||||||| | || |||||||||| | |||||||| | |
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 166 aacagaggaagtat 179
||| |||| |||||
Sbjct: 17 aacggagggagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||||| |||||| |||||||| | || ||||||| | ||||||||||| |||||
Sbjct: 144 tgtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || ||||||| ||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 74 atgaatctaga 84
|| ||||||||
Sbjct: 80 ataaatctaga 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatt 51
||||||||| ||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcatt 42
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 122 catcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
||||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaac 15
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
|||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 121 tgtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 126 aatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||| | |||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 24 gtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
|||||||||| ||||||||| ||||||||| || |||||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||||||||||||| | || || |||| | ||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 98 atgaatctaga 88
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgta 164
|||||||||||||||| |||| |||||||| | || |||| ||||| | ||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtg 144
Query: 165 aaacagaggaagtat 179
|||| |||| |||||
Sbjct: 145 aaacggagggagtat 159
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||| |||||||| | || ||||||| | ||||||||||| |||| |
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 73 aatgaatctagatatat 89
||| |||||| ||||||
Sbjct: 64 aataaatctatatatat 80
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa
Japonica Group
Length = 151
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || ||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| |||||||| | || ||||||| | ||||| ||||| ||||||
Sbjct: 148 gtactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtt 89
Query: 73 aatgaatctag 83
|||||||||||
Sbjct: 88 aatgaatctag 78
Score = 58.0 bits (29), Expect = 5e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
|||||||||||||||||||| | ||||| | | |||||||||| | |||||||||| |
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 166 aacagaggaagta 178
||| |||||||||
Sbjct: 17 aacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
||||||||||||||||| ||||| || | || |||||||||| | |||||||| | ||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 169 agaggaagta 178
|||| ||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 5e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| |||||| |||||||| | |||||||||| | ||||||||||| ||| |
Sbjct: 159 gtactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatc 100
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaa 165
||||||||||||||||||| |||||||| | || || ||||||| | |||||||| | |
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 166 aacagaggaagtat 179
||| ||||||||||
Sbjct: 17 aaccgaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||| |||||||| | || |||| || | ||||||||||| ||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 67.9 bits (34), Expect = 5e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
|||||||||||||||||||||||| | |||||| | || || |||| || | ||||||||
Sbjct: 81 catatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacatt 22
Query: 162 gtaaaacagaggaagtat 179
|| |||| ||||||||||
Sbjct: 21 gtgaaacggaggaagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | || |||| || | ||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| |||| | |||||||| | | ||||| |||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 74 atgaatcta 82
|||||||||
Sbjct: 94 atgaatcta 86
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcattt 52
||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 118 tgtactccctccgtttcacaatgtaagtcattctagcattt 78
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcattt 52
||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||| |||| |||| ||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 131 gaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| | ||||||||||||||||| |||||| |||| |||| ||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| |||| | || ||||||| | ||||| ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 74 atgaatcta 82
|||||||||
Sbjct: 76 atgaatcta 68
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
||||||| |||||||||||||||| ||||| || | || |||||||||| | |||| |||
Sbjct: 60 catatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatatt 119
Query: 162 gtaaaacagaggaagta 178
|| |||| |||| ||||
Sbjct: 120 gtgaaacggagggagta 136
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatgactt 156
||||||||| ||||||||||||| | |||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 36 aagtcattttagcatttctcacattcatattgatgttaatgaatc 80
|||||||| ||||||||| |||||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 39 tcattttagcatttctcacattcatattgatgttaatgaatc 80
||||| ||||||||| |||||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 112 gattcattaacatcaatatgaatataggaaatgctagaatga 153
||||||||| ||||||||||||| | ||||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||||||| |||| | || ||||||| | ||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 74 atgaatcta 82
|||||||||
Sbjct: 65 atgaatcta 73
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 102 catatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
||||||| |||||||||||||||| ||||| || | || |||||||||| | |||| |||
Sbjct: 81 catatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatatt 22
Query: 162 gtaaaacagaggaagta 178
|| |||| |||| ||||
Sbjct: 21 gtgaaacggagggagta 5
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagtat 179
||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagtat 127
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcac 57
|||| |||| |||||||||||||||||||| |||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctcac 83
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 119 taacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||| ||||| | |||||||||||||| ||||| ||||| |||| |||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
|||||||||| ||||||||||||||| | || ||||||| | ||||| ||| | ||||||
Sbjct: 159 gtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtt 100
Query: 73 aatgaatctagatatat 89
||| |||||||| ||||
Sbjct: 99 aataaatctagacatat 83
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||| ||||||||| | ||| || | || |||||||||| | |||||||||
Sbjct: 83 atatgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattg 142
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 143 tgaaacggagggagta 158
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctaga 84
||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 87 tagcatttcccacattcatattgatgtcaatgaatctaga 48
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctag 148
|||||||||||||| |||||||||||||| | |||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 48 catttctcacattcatattgatgttaatgaatctaga 84
|||||| ||||||||||||||||| ||||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctaga 41
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatg 144
||||||||||||||| |||||||||||||| | |||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| |||||||||| ||||||||| ||| ||||||| ||| ||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 79 atgaatctagacatat 64
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||| ||||| || ||||| ||||||||||||| ||||
Sbjct: 64 atatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatattg 123
Query: 163 taaaacagaggaagta 178
| |||| |||||||||
Sbjct: 124 tgaaacggaggaagta 139
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcata 64
|||| |||| |||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 139 gaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||||||||||| |||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacatt 60
|||||| || |||||| ||| ||||||||||||||||||||||||||
Sbjct: 91 tactccatccgtttcataatataagtcattttagcatttctcacatt 45
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttc 53
||||| |||| |||||||||||||||||||| |||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||||||| | |||||||||| |||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 74 atgaatctagatatat 89
||||||||||||||||
Sbjct: 96 atgaatctagatatat 81
Score = 44.1 bits (22), Expect = 7e-04
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 97 acattcatatgtctagattcattaacatcaatatgaatataggaaatgctagaatgactt 156
|||| ||||| |||||||||||||| ||| | || ||| | | ||||||| || | |||
Sbjct: 75 acatacatatatctagattcattaatatctaaataaatgtggacaatgctaaaaagtctt 134
Query: 157 acattgtaaaacagaggaagta 178
||||||| |||| |||||||||
Sbjct: 135 acattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 11 ttgtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatg 70
||||||||||||||||||| | | |||| | || ||| ||| | ||||||||||| ||||
Sbjct: 2 ttgtactccctctgtttcatattataagactttctagaattgcccacattcatatagatg 61
Query: 71 ttaatgaatcta 82
||||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 55 cacattcatattgatgttaatgaatcta 82
||||||||||| ||||||||||||||||
Sbjct: 119 cacattcatatagatgttaatgaatcta 92
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 136 taggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 47 taggaaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 145 ctagaatgacttacattgtaaaacagaggaagtat 179
||||||||||||||||||| |||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 gtttcacaatgtaagtcattttagcatttc 53
|||||||||||||||||||| |||||||||
Sbjct: 79 gtttcacaatgtaagtcattctagcatttc 50
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcatt 43
|||| |||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| |||||||| | || ||||||| | |||||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 96 cacattcatatgt--ctagattcattaacatcaatatgaatataggaaatgctagaatga 153
||||||||||||| ||||||||||||||||| ||| ||| | || |||||||||| |
Sbjct: 89 cacattcatatgtttctagattcattaacatccataaaaatgtgggcaatgctagaaagt 30
Query: 154 cttacattgtaaaacagaggaagta 178
|||||||| | |||| |||| ||||
Sbjct: 29 cttacattatgaaactgagggagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgta 164
||||||||||||||||||||| |||||||| | || |||||||||| | |||| | | |
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 165 aaacagaggaagtat 179
|||| ||||||||||
Sbjct: 113 aaacggaggaagtat 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctaga 84
||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 95 tagcattgcccacattcatatagatgttaatgaatctaga 56
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 104 tatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
|||||||||||||||||||||| |||| ||||| | |||||||||| | ||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacatt 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||| ||| |||||| |||||||| | || ||||||| || ||| |||| |||||||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtta 78
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 77 atgaatctaga 67
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||| ||||||||||| |||||||| ||| |||| ||||||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 74 at 75
||
Sbjct: 48 at 47
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcatt 43
||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||| |||||||||||| |||||| |||| ||||||||||
Sbjct: 70 aaatactagaatgacttgcattgtgaaacggaggaagtat 109
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| |||||||| | || ||||||| | ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 74 atgaatctag 83
||||||||||
Sbjct: 98 atgaatctag 89
Score = 58.0 bits (29), Expect = 5e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
|||||||||||||||||| ||| |||| ||| | || || ||||||| | ||||||||
Sbjct: 80 atatgtctagattcattagtatctatataaatgtgggcaacgctagaaagtcttacatta 21
Query: 163 taaaacagaggaagtat 179
| |||||||||||||||
Sbjct: 20 tgaaacagaggaagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| ||||||||||| |||||||| | || |||| || | |||||| |||| ||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 65 atgaatctagacatat 80
Score = 44.1 bits (22), Expect = 7e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaac 168
|||||||||||| ||| |||||||| | || |||||||||| | |||||||| | ||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 169 agaggaagta 178
|||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 24 gtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatgaatctag 83
|||||| ||| ||||||||| || ||||||||||||| |||| || ||| |||||||||
Sbjct: 15 gtttcataatataagtcattctaacatttctcacatttatatggaaattagtgaatctag 74
Query: 84 atatat 89
||||||
Sbjct: 75 atatat 80
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacat 59
||||||||| |||||| ||||||||||||| ||||||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||||||| | |||| |||| ||||
Sbjct: 88 ggaaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgt 71
||||||||| |||||||||||||| ||||| |||||||| ||| ||| |||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 140 aaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||| ||||||||| |||| |||| |||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagtat 105
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
|||| |||||||||||||||||||| | || |||| || | ||||||||||| ||| |||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 74 atgaat 79
||||||
Sbjct: 54 atgaat 49
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 113 attcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagag 172
||||||||| ||| |||||||| | || || ||||||| | |||||||||| ||||||||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 173 gaagta 178
||||||
Sbjct: 109 gaagta 114
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 138 ggaaatgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagc 48
|||||||||| |||||||||||||||||||| ||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattctagc 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacat 59
|||| |||| ||| |||||||||||||||| ||||||||| |||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 144 gctagaatgacttacattgtaaaacagaggaagta 178
|||||||||||||||||||| |||| |||| ||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagata 86
||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct: 2 tagcatttcccacgttcatattgatattaatgaatctagata 43
Score = 58.0 bits (29), Expect = 5e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagat 85
||||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 90 tagcatttcccacgttcatattgatattaatgaatctagat 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctag 148
|||||||||||||| ||||||||||| | |||||||||||
Sbjct: 41 tctagattcattaatatcaatatgaacgtgggaaatgctag 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 108 tctagattcattaacatcaatatgaatataggaaatgctag 148
|||||||||||||| ||||||||||| | |||||||||||
Sbjct: 51 tctagattcattaatatcaatatgaacgtgggaaatgctag 91
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 48 catttctcacattcatattgatgttaatgaatctagatatat 89
|||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 105 atgtctagattcattaacatcaatatgaatataggaaatgctagaatg 152
||||||||||||||||||| | |||||||| | | |||||||||||||
Sbjct: 48 atgtctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatg 152
|||| |||||||||||||||| | |||||||| | ||||||| |||||||
Sbjct: 53 atatatctagattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 40 cattttagcatttctcacattcatattgatgttaatgaatctaga 84
|||| |||||||| ||||||||||| | ||||||||||||||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctaga 45
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| ||||| |||||||| | || ||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 74 atgaatctagatat 87
|| |||||||||||
Sbjct: 65 ataaatctagatat 78
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
|||| |||| |||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 58.0 bits (29), Expect = 5e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatatt 66
|||| |||| |||||||||||||||| ||| ||| ||||| ||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 126 aatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||||| | |||||| ||| ||| ||||||||||| |||| |||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagatatat 89
||||||| | ||||||||||| ||||||||||||||||||||||
Sbjct: 89 tagcattgcccacattcatatatatgttaatgaatctagatatat 45
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaat 134
|||||||||||||||||||||| ||||||||
Sbjct: 46 atatgtctagattcattaacatatatatgaat 15
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 55 cacattcatattgatgttaatgaatctagatatat 89
||||||||||| ||||||||||||||||| ||||
Sbjct: 12 cacattcatatatatgttaatgaatctagacatat 46
Score = 44.1 bits (22), Expect = 7e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctag 148
|||| ||||||||||||||||| |||||||| | || ||||||||
Sbjct: 45 atatatctagattcattaacatatatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagatatat 89
||||||| | ||||||||||| |||||||||||||||| ||||||
Sbjct: 36 tagcattgcccacattcatatagatgttaatgaatctatatatat 80
Score = 58.0 bits (29), Expect = 5e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| | | |||| | || ||||||| | ||||||||||| |||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 74 atgaatcta 82
|||||||||
Sbjct: 100 atgaatcta 92
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| |||||||| | || |||||||||| | |||| | | | ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 170 gaggaagtat 179
||||||||||
Sbjct: 13 gaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaa 150
|||||||||||||||| |||||||| | || ||||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagatatat 89
||||||| | ||||||||||| ||||||||||||||||||||||
Sbjct: 12 tagcattgcccacattcatatatatgttaatgaatctagatatat 56
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctag 83
||||||| | ||||||||||| |||||||||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctag 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaa 150
||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaa 150
|||| ||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 56 atatatctagattcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 17 tccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgttaatg 76
|||||| |||||| |||||||| | || ||||||| ||||||||||| |||||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 77 aatctaga 84
||||||||
Sbjct: 45 aatctaga 38
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
||||||||||| |||||||| |||||||| | | |||||||||| | ||||||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacatt 91
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaa 150
|||||||||||||||||| |||| |||||||| | || ||||||||||
Sbjct: 83 atatgtctagattcattagcatctatatgaatgtgggcaatgctagaa 130
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctagatatat 89
||||||| | ||||||||||| |||| ||||||||||||| ||||
Sbjct: 127 tagcattgcccacattcatatagatgctaatgaatctagacatat 83
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 143 tgctagaatgacttacattgtaaaacagaggaagta 178
||||||||||||||||||||| |||| |||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagca 49
|||| |||| |||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagca 40
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 106 tgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacatt 161
||||||||||| |||||||| |||||||||| | |||||||||| | ||||||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacatt 22
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 107 gtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaa 166
||||||||||||||| ||| ||||| |||| || ||| |||||||||||||||| | ||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 167 acagaggaagta 178
|| |||| ||||
Sbjct: 16 acggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 127 atatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||||| ||| ||||||||||||||||||||| | |||| |||||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| ||||||||||||| || ||| | || || ||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 74 atgaatctaga 84
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 tgtactccctctgtttcacaatgtaagtcattttagcatt 51
|||||| |||| |||||| ||||||||||||| |||||||
Sbjct: 138 tgtacttcctccgtttcataatgtaagtcattctagcatt 99
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 14 tactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtta 73
||||||||| |||||| | | |||| | || ||||||| | ||||||||||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 74 atgaatctagatatat 89
||||||||||| ||||
Sbjct: 72 atgaatctagacatat 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaa 150
|||||||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 57 atatgtctagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaa 150
||||| ||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 59 atatgcctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 104 tatgtctagattcattaacatcaatatgaatataggaaatgctagaa 150
|||| |||||||||||||||| |||||||||| || ||||||||||
Sbjct: 55 tatgcctagattcattaacatatatatgaatatgggcaatgctagaa 9
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctag 83
||||||| | ||||||||||| |||||||||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctag 65
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 103 atatgtctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattg 162
||||||||||||||||||||||| || | | ||||| |||| ||||| | |||||||||
Sbjct: 83 atatgtctagattcattaacatctatgggtacataggcaatgttagaaagtcttacattg 142
Query: 163 taaaacagaggaagta 178
| |||| |||| ||||
Sbjct: 143 tgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 13 gtactccctctgtttcacaatgtaagtcattttagcatttctcacattcatattgatgtt 72
||||| |||| |||||| |||| ||| | || ||||||| | ||||||||| | ||||||
Sbjct: 4 gtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtt 63
Query: 73 aatgaatcta 82
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 110 tagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtaaaaca 169
|||||||||||||||| | |||||| | || |||||||||| | ||| |||| | ||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 170 gaggaagta 178
|||||||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 96 cacattcatatgtctagattcattaac 122
|||||||||||||||||||||||||||
Sbjct: 61 cacattcatatgtctagattcattaac 35
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 45 tagcatttctcacattcatattgatgttaatgaatctag 83
||||||| | ||||||||||| |||||||||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctag 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 109 ctagattcattaacatcaatatgaatataggaaatgctagaa 150
||||||||||||||||| |||||||| | || ||||||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 55 cacattcatattgatgttaatgaatctaga 84
||||||||||| |||||||||||||||||
Sbjct: 22 cacattcatatatatgttaatgaatctaga 51
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 105 atgtctagattcattaacatcaatatgaat 134
|||||||||||||||||||| ||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaat 25
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 96 cacattcatatgtctagattcattaac 122
|||||||||||||||||||||||||||
Sbjct: 79 cacattcatatgtctagattcattaac 105
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 120 aacatcaatatgaatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
|||||| |||||||||| | |||||||||| | ||||||||||||||| |||| ||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 132 aatataggaaatgctagaatgacttacattgtaaaacagaggaagta 178
||||||| |||||||||||||||||| ||||| |||| ||| |||||
Sbjct: 43 aatatagaaaatgctagaatgacttatattgtgaaacggagtaagta 89
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 142 atgctagaatgacttacattgtaaaacagaggaagtat 179
|||||||||||||||||| ||| |||| ||||||||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagtat 4
