miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>47010_ath-miR397a:pmrd
          Length = 107

 Score = 75.8 bits (38), Expect = 6e-15
 Identities = 92/109 (84%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaatgaacatcattgagtgcatcgttgatgtaattttacttattttattccattgttga 60
           |||||||||||||||||||||| ||||||||||||||  | | || | || |||||||||
Sbjct: 1   tgaatgaacatcattgagtgcagcgttgatgtaattt--cgttttgtttttcattgttga 58

                                                            
Query: 61  attaattaaagaagtatatatcagcgttgcattcaattatgtttttcta 109
           ||  ||||||  | | |||| |||||||||  |||||||||||||||||
Sbjct: 59  atggattaaaagaatttataccagcgttgcgctcaattatgtttttcta 107




>48376_bna-miR397b:pmrd
          Length = 96

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Plus

                                                                      
Query: 6  gaacatcattgagtgcatcgttgatgtaattttacttattttattccattgttgaattaa 65
          ||||||||||||||||| ||||||||| | ||||||||| || || |||||||||||  |
Sbjct: 1  gaacatcattgagtgcagcgttgatgtga-tttacttatctt-tttcattgttgaatgga 58

                
Query: 66 ttaaag 71
          ||||||
Sbjct: 59 ttaaag 64




>48375_bna-miR397a:pmrd
          Length = 96

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 6  gaacatcattgagtgcatcgttgatgtaattt 37
          ||||||||||||||||| ||||||||| ||||
Sbjct: 1  gaacatcattgagtgcagcgttgatgtgattt 32




>54873_vvi-miR397b:pmrd
          Length = 118

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 7  aacatcattgagtgcatcgttgatg 31
          |||||||||||||||| ||||||||
Sbjct: 7  aacatcattgagtgcagcgttgatg 31




>54872_vvi-miR397a:pmrd
          Length = 118

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 7  aacatcattgagtgcatcgttgatg 31
          |||||||||||||||| ||||||||
Sbjct: 7  aacatcattgagtgcagcgttgatg 31