miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40098_ath-MIR400:mirbase
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 tgaggattgtttatgagagtattataagtcactacatttggtaagcaaagtgttgtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggattgtttatgagagtattataagtcactacatttggtaagcaaagtgttgtttct 60
Query: 61 caaacgaagtgacttatgataatctcatgaatggattttgca 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaacgaagtgacttatgataatctcatgaatggattttgca 102
>39894_aly-MIR400:mirbase
Length = 177
Score = 149 bits (75), Expect = 5e-37
Identities = 94/99 (94%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 5 gattgtttatgagagtattataagtcactacatttggtaagcaaa-gtgttgtttctcaa 63
||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| |||
Sbjct: 46 gattgtttatgagagtattataagtcactacatttggtatgcaaaagttttgtttcccaa 105
Query: 64 acgaagtgacttatgataatctcatgaatggattttgca 102
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 106 acgaagtgacttataataatctcatgaatggattttgca 144
