miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40100_ath-MIR402:mirbase
Length = 309
Score = 613 bits (309), Expect = e-176
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 1 cgtggtagataagtttgagttgcatagtggcagtcttcctttgtttgttaacccatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtggtagataagtttgagttgcatagtggcagtcttcctttgtttgttaacccatattt 60
Query: 61 tcatgattcgaggcctattaaacctctgttacatctgctttttgaaaagttgtcattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatgattcgaggcctattaaacctctgttacatctgctttttgaaaagttgtcattttt 120
Query: 121 ctgaaatcttcttgcctcaatttccaacagcagattcatctttcattggatgatccgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgaaatcttcttgcctcaatttccaacagcagattcatctttcattggatgatccgtta 180
Query: 181 gtttttgatagaaaaaatgaggtgggaagaaattaagactgacttcgaaatagcctttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttttgatagaaaaaatgaggtgggaagaaattaagactgacttcgaaatagcctttaa 240
Query: 241 aataggggtttatagacctcgaatcatatcaaacgagtctgctactatgctactgaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aataggggtttatagacctcgaatcatatcaaacgagtctgctactatgctactgaaaac 300
Query: 301 tttatcaaa 309
|||||||||
Sbjct: 301 tttatcaaa 309
>39895_aly-MIR402:mirbase
Length = 232
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 gagttgcatagtggcagtcttcctttgttt 46
|||||||||||||||||||||| |||||||
Sbjct: 1 gagttgcatagtggcagtcttcttttgttt 30
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 205 ggaagaaattaagactgacttc 226
||||||||||||||||||||||
Sbjct: 143 ggaagaaattaagactgacttc 164
