miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 206 bits (104), Expect = 1e-52
Identities = 140/152 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||||||||||||| |||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|| ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct: 67 gactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||| ||||||||||||||||||||
Sbjct: 127 agaatgacttatattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 8e-32
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||||| | ||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | |||||| |||||| |||||||| ||| | | ||||||||||
Sbjct: 93 tctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||||||| | | |||||||| |||||||||||||||||||
Sbjct: 88 tctagattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||| |||||| |||||||| |||||||| |||||||| ||||||||| ||||||||
Sbjct: 76 atctagagtcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 206 bits (104), Expect = 1e-52
Identities = 140/152 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||||||||||||||||||||||||||| ||| | | ||||| |
Sbjct: 67 gaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatgtt 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggagggagta 158
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||||||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | |||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 93 tctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| ||||||||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 76 atctagattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||
Sbjct: 88 tctagattcattagcatcaatatgaatgtggtaaatgttagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 206 bits (104), Expect = 1e-52
Identities = 140/152 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||||||| |||| |||||||||||||||| ||||
Sbjct: 156 cttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||||||||||||||||| ||||||||| ||| | || ||||||
Sbjct: 96 gaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| ||||||||||||||||||||||||||
Sbjct: 36 ataatgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 8e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| ||| ||||| ||| | |||||||||| |
Sbjct: 70 tctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaa 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| ||||||||||||||| ||||
Sbjct: 130 atgacttatattgtgaaacggaggaagta 158
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atctagattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 146
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 147 acggaggaagta 158
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggtaatgctataatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 200 bits (101), Expect = 6e-51
Identities = 137/149 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||||||||| |||||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||||||||||||||||||||||||||| |||||||| ||| | ||||||| ||||
Sbjct: 93 tctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 147 bits (74), Expect = 8e-35
Identities = 131/150 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| |||||||| ||| | |||| |||||
Sbjct: 70 tctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| |||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagtaa 159
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||| |||| ||| ||||||||| ||||||||
Sbjct: 87 atctagattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacattgtgaa 146
Query: 220 acgaagggagtaa 232
||| |||||||||
Sbjct: 147 acggagggagtaa 159
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 200 bits (101), Expect = 6e-51
Identities = 137/149 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||||||||||||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| |||||||||||||||||||||||||| ||||| ||| ||| | ||||||||||||
Sbjct: 93 tctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 2e-32
Identities = 130/150 (86%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||| | || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | | ||||||||||| |||||||| ||| | | ||||| ||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| |||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagtaa 159
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||||||||||| ||||| || ||||||||| |||||||||||
Sbjct: 90 tagattcattaatatcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacg 149
Query: 223 aagggagtaaca 234
|||||||||||
Sbjct: 150 gagggagtaaca 161
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||||||||||||||||| ||| ||||| ||| | | ||||||
Sbjct: 67 gaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggagggagta 158
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| || ||||| ||| | |||||||||| |
Sbjct: 93 tctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaa 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 76 atctagattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| ||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 139/152 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||||||||||| |||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||||||||||||||||| || |||||| ||| | |||||| ||
Sbjct: 67 gaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaatact 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggagggagta 158
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| ||||||||| || | | ||||||||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || ||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacaacaatatgaatgtgggaaatactagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||| |||||| |||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 192 bits (97), Expect = 2e-48
Identities = 136/149 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||| ||||||||||||||||| ||| |||| ||||||||||||| ||| |||||||
Sbjct: 153 cctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| | |
Sbjct: 93 tctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaa 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 159 bits (80), Expect = 2e-38
Identities = 134/152 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||| | |||| ||||||| ||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||||| | ||||||||||||| |||||||| ||| | |||||||||
Sbjct: 67 gaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||| ||||||||||||
Sbjct: 127 agaatgacttacattgtgatacggagggagta 158
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 87 atctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgat 146
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 147 acggagggagta 158
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 192 bits (97), Expect = 2e-48
Identities = 136/149 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||||||||||||| ||| |||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| ||| || |||||||||||||||||||||| ||||||||| ||| | ||||||||||||
Sbjct: 70 tttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 121 bits (61), Expect = 5e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||| ||| |||| || ||||| ||| | | |||||||| |
Sbjct: 93 tctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctata 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 57 aatatgaatgtggaaaatgctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 192 bits (97), Expect = 2e-48
Identities = 136/149 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||| |||||| ||||||||| ||| ||||| |||||||||||| ||| |||||||
Sbjct: 153 cctccgttccacaatataagtcattctagcatttttcacattcatattgatattaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| |||||||||||||||||||||||||| || |||||||||| | ||||||||||||
Sbjct: 93 tctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 1e-24
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||| ||||| | |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | | ||||||||||| |||||||| ||| | ||||||||||
Sbjct: 70 tctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| |||||| |||||||||||||
Sbjct: 130 atgacttatattgtggaacggagggagta 158
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || |||||| |||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||
Sbjct: 90 tagattcattaatatcaatatgaatgtgaaaaatgctagaatgacttatattgtggaacg 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 190 bits (96), Expect = 6e-48
Identities = 138/152 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||| |||||||||| ||||||||||| ||||||||| ||| | | |||||||
Sbjct: 96 gaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 161 bits (81), Expect = 5e-39
Identities = 132/149 (88%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||| ||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | | |||||| | ||||||||||||| ||||||||| ||| | ||||||||||||
Sbjct: 70 tctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggaggaagta 158
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 87 atctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 146
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 147 acggaggaagta 158
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacg 14
Query: 223 aagggagta 231
||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 184 bits (93), Expect = 4e-46
Identities = 137/152 (90%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 67 gaatctagata------tatgtctagattcattagcatcaatatgaatgtaggaaatgct 120
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||| ||||||||||||||||||||
Sbjct: 121 agaatgacttatattgtgaaacggagggagta 152
Score = 139 bits (70), Expect = 2e-32
Identities = 129/149 (86%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||| | ||||||||||| || ||||||||
Sbjct: 147 cctccgtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaa 88
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||| |||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 87 tctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 117 bits (59), Expect = 7e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 82 tctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaa 141
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 142 cggagggagta 152
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 137/152 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||| | ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatattaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 67 gaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| ||||||||||||||||||||||||||
Sbjct: 127 aaaatgacttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 3e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||||||| |||| ||||| |||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| |||||||||||||| || | ||| ||| | ||||||||||||
Sbjct: 93 tctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 88 tctagattcattagcatcaatatggatgtgagaaatgctaaaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || | |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 137/152 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||
Sbjct: 67 gaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| |||| ||||||||||||||||||||
Sbjct: 127 agaatggcttatattgtgaaacggagggagta 158
Score = 121 bits (61), Expect = 5e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| |||| |||| ||| ||||| |||||| ||||| || |||||||
Sbjct: 153 cctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| ||| ||||| ||| | |||||||||| |
Sbjct: 93 tctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatgctaca 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| ||||||||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 76 atctagattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||| |||||| |||||||| |||| ||||||||||||||
Sbjct: 88 tctagattcattatcatcaatataaatgtgaaaaatgctagaatggcttatattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 180 bits (91), Expect = 6e-45
Identities = 139/155 (89%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| || ||||| ||||||||||||| || ||||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||| | |||||| | ||||||||||||| ||||||||| ||| | |||||||||
Sbjct: 96 gaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagtaaat 161
||||| |||||||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagtaaat 2
Score = 176 bits (89), Expect = 9e-44
Identities = 134/149 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||||||||||||||||| |||||||| ||||||||| ||| | |||||| ||||
Sbjct: 70 tctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggaggaagta 158
Score = 113 bits (57), Expect = 1e-24
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagtaa 232
||| |||||||||
Sbjct: 16 acggagggagtaa 4
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| |||||||||||||||||||||| || ||||||||| |||||||||
Sbjct: 88 tctacattcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 4e-43
Identities = 136/152 (89%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||| |||||||| ||||||||||||| |||||||| ||| | |||||||||
Sbjct: 67 gaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||| ||||||||||||||||||||
Sbjct: 127 agaatgacttatattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 8e-32
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||| ||||||||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||| |||||| | ||||||||||||| ||| ||||| ||| | | ||| | ||||
Sbjct: 93 tctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaagttaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| ||||||||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 87 atctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaa 146
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 147 acggagggagta 158
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| ||||||||||||| ||| | || ||||||||||||||||||
Sbjct: 76 atctagattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 174 bits (88), Expect = 4e-43
Identities = 136/152 (89%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| | ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||| ||||||||||||| ||||||||| ||| | |||||| ||
Sbjct: 67 gaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaattct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| ||||| ||||||||||||||||||||
Sbjct: 127 aaaatgacttagattgtgaaacggagggagta 158
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||||||| |||| ||||||| ||||| || |||||||
Sbjct: 153 cctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| | ||||||| ||| | ||||||||||||
Sbjct: 93 tctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||| |||||||||||| ||||||||||||| |||||||||
Sbjct: 88 tctagattcattaccatcaatattaatgtgggaaattctaaaatgacttagattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 174 bits (88), Expect = 4e-43
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||| |||||||||||||| |||| ||||||| ||||| || ||||
Sbjct: 156 cttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||||| |||||||||||||||||| | ||||||||||||| | ||||||||
Sbjct: 96 gaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatgca 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| |||||| |||||||||||||||||||
Sbjct: 36 aaaatgacttactttgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 2e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||| |||||||||||| | |||| ||||||| ||||| || | |||||
Sbjct: 10 cctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||| | | ||||||||||||| ||||||||||||| | |||||||||| |
Sbjct: 70 tctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatgctaaa 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| |||||| |||||||||||||| ||||
Sbjct: 130 atgacttactttgtgaaacggaggaagta 158
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 87 atctagattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaa 146
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 147 acggaggaagta 158
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||| | ||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 75 tctagattcataaacatcaatataaatgtgggaaatgcaaaaatgacttactttgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 132/147 (89%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaatc 71
||||||||||||||||||||||| || |||| |||||||||||| || |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 72 tagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaat 131
||||||||||||||||||||||||||||| ||||| || ||| ||| ||||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 132 aacttacattgtgaaacggagggagta 158
||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 3e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||| | |||||| || ||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| ||||||||| ||| | |||||| ||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||| ||||||
Sbjct: 33 atgacttacattgtgaaacggaaggagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||| |||||| || ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgagaaatggtagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| | ||||||
Sbjct: 16 acggaaggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||| |||||| | | |||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaatatcaacatgaatttagaaaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 170 bits (86), Expect = 6e-42
Identities = 136/152 (89%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatactaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||||||||| |||||||| |||| |||||||||| ||| | ||||||| |
Sbjct: 67 gaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatggt 123
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| ||||||||| ||||||||||||||||
Sbjct: 124 ggaatgacttacattatgaaacggagggagta 155
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 76 atctagattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaa 17
Query: 220 acgaagggagtaaca 234
||| ||| |||||||
Sbjct: 16 acggaggaagtaaca 2
Score = 103 bits (52), Expect = 1e-21
Identities = 126/150 (84%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| | |||| ||||||||||||| || | |||| |
Sbjct: 150 cctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatgga 91
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| ||||| | |||||||||||||| |||||||| ||| | |||||| |||||
Sbjct: 90 tctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaatactaga 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| ||||| ||||||||||||||| |||||
Sbjct: 33 atgacttatattgtgaaacggaggaagtaa 4
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||| |||| |||||||||||||||||||||||| | ||||||||| ||| |||||
Sbjct: 85 tctagatccattggcatcaatatgaatgtgggaaatggtggaatgacttacattatgaaa 144
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 145 cggagggagta 155
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 138/153 (90%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatact-aa 65
|||||||||||||||||||||||||||| ||| |||| ||||||||||| | || | ||
Sbjct: 156 cttcctccgtttcacaatgtaagtcattctagcatttctcacattcatat-attagttaa 98
Query: 66 tgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgc 125
||||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||
Sbjct: 97 tgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatga 38
Query: 126 tagaataacttacattgtgaaacggagggagta 158
|||||| ||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 2e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| | |||| ||| | |||||||||||
Sbjct: 70 tctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 130 atgacttacattgtgaaacggaggaagta 158
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||| ||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 133/149 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| | |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||| | ||
Sbjct: 70 tctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtgga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||| ||||||
Sbjct: 130 atgacttacattatgaaacggaaggagta 158
Score = 141 bits (71), Expect = 5e-33
Identities = 128/147 (87%)
Strand = Plus / Minus
Query: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaatc 71
||||||||| ||||||||||||| | |||| ||||||||||||| || |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 72 tagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaat 131
|||| | |||||| | ||||||||||||| || |||||| ||| | ||||||||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 132 aacttacattgtgaaacggagggagta 158
||||||||||||||||||||||||||
Sbjct: 31 gacttacattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| || ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacaacaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||||||||||||| | ||||||||| ||| |||||
Sbjct: 88 tctagattcattaccatcaatatgaatgtgggaaatggtggaatgacttacattatgaaa 147
Query: 221 cgaagggagta 231
|| | ||||||
Sbjct: 148 cggaaggagta 158
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 133/149 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| || |||| | ||||| |||||| || ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctactattgttcacatccatattgatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||||||||||||||||||||||||| ||||| |||| ||| | | ||||||||||
Sbjct: 93 tctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 123 bits (62), Expect = 1e-27
Identities = 128/150 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| ||||||||||||||||| || | ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||||||||||||| || | ||| ||||
Sbjct: 70 tctagacatatatatctatctagattcattagcatcaatatggatgtgaacaatagtaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| ||||||||| |||||||||||||||||
Sbjct: 130 atgacttacattatgaaacggagggagtaa 159
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| ||||| |||||||||||| |||||||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||||||||||||| ||||| ||| || ||||||||| ||| ||||
Sbjct: 87 atctagattcattagcatcaatatggatgtgaacaatagtagaatgacttacattatgaa 146
Query: 220 acgaagggagtaaca 234
||| |||||||||||
Sbjct: 147 acggagggagtaaca 161
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 168 bits (85), Expect = 2e-41
Identities = 134/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||| ||||||||||| ||| |||| ||| ||||||||||||| ||| |||||||
Sbjct: 10 cctccgttttacaatgtaagttattctagt-tttcccacattcatattgatattaatgaa 68
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||||||||||||||||||||||||||| ||||||||| ||| | | |||| ||||
Sbjct: 69 tctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaatattaga 128
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 129 atgacttacattgtgaaacggagggagta 157
Score = 153 bits (77), Expect = 1e-36
Identities = 132/149 (88%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaa 93
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| |||||||| ||| | ||||| |||||
Sbjct: 92 tctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||
Sbjct: 33 ataacttacattgtaaaacggagggagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||||||| |||| || ||||||||| |||||||||
Sbjct: 87 tctagattcattaacatcaatatgaatgtggaaaatattagaatgacttacattgtgaaa 146
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 147 cggagggagta 157
Score = 63.9 bits (32), Expect = 9e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||||||| ||| ||| ||||| ||||| ||
Sbjct: 75 atctagattcattaatatcaatatgaatgtgggaaa-actagaataacttacattgtaaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||| |||||| ||| ||| ||||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgctaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||| | ||||||| |||||||||||||| ||||||||| ||| | | |||||||
Sbjct: 67 gaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
||||| |||||||||||||||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggagggagtaa 159
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||||||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| ||||||||| ||||||||||||||||| |||| ||| | | |||||||||
Sbjct: 93 tctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| || |||||||||||||||||| ||||
Sbjct: 33 atgacatacattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 7e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagtaaca 234
|| |||||||||||
Sbjct: 148 cggagggagtaaca 161
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||||||||| |||||||||||| ||||||| |||||| || ||||||||||
Sbjct: 74 ctagattcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaac 15
Query: 222 gaagggagta 231
| ||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 133/149 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||||||||| ||||| ||||| || ||||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||| ||||||||||||||||||||| ||||| |||| ||| | | ||||||||||
Sbjct: 93 tctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 131 bits (66), Expect = 5e-30
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| ||||||||||||||||| || | ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | |||||||||||||||||| |||| || | |||| |||||
Sbjct: 70 tctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaatactaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| ||||||||| |||||||||||||||||
Sbjct: 130 atgacttacattatgaaacggagggagtaa 159
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| ||||| |||||||||||| |||||||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattggcatcgatatgaatgtggaaaatgctagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||||||| ||||| ||||| |||| ||| ||||||||| ||| ||||
Sbjct: 87 atctagattcattagcatcgatatggatgtgaaaaatactagaatgacttacattatgaa 146
Query: 220 acgaagggagtaaca 234
||| |||||||||||
Sbjct: 147 acggagggagtaaca 161
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 167 bits (84), Expect = 9e-41
Identities = 136/152 (89%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||| | ||| |||||| ||||||||||| ||||||||| ||| | |||||||||
Sbjct: 67 gaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatgct 125
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 126 agaatgacttacattgtgaaacggagggagta 157
Score = 147 bits (74), Expect = 8e-35
Identities = 132/150 (88%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 93
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | | || ||| || |||||||||||| ||||||||| ||| | ||||||||||||
Sbjct: 92 tctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| ||||||||||||||||||||| |||||
Sbjct: 33 atgacttacattgtgaaacggaggaagtaa 4
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 89 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 148
Query: 223 aagggagta 231
||||||||
Sbjct: 149 gagggagta 157
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
|||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 222 gaagggagtaa 232
| ||| |||||
Sbjct: 14 ggaggaagtaa 4
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 9e-41
Identities = 135/152 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||| |||| | ||||||||| |||||||||||| ||||||||| || |||||
Sbjct: 7 cttcctccgttccacagtataagtcattctagtattttccatattcatattgatgctaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| ||||||||||||||||| ||||||||||||||||||||| ||| | |||||| |
Sbjct: 67 gaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatgtt 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||| |||||| |||||||||||||
Sbjct: 127 agaatgacttatattgtggaacggagggagta 158
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||| |||||| ||||||||| || |||| || ||||||||| || ||||||||
Sbjct: 153 cctccgttccacaatataagtcattctaacatttctcatattcatattgatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | | |||||| | |||| |||||||||||||||||| ||| | | |||| |||||
Sbjct: 93 tctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaatactaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| | |||| |||||||| ||||
Sbjct: 33 atgacttatactgtggaacggaggaagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||||||||||||||||| || |||||| || |||||||||||||||| ||||
Sbjct: 90 tagattcattagcatcaatatgaatatgagaaatgttagaatgacttatattgtggaacg 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||| |||||||||||||||||||||| ||| |||| ||| ||||||||||| |||| |
Sbjct: 76 atctaaattcattagcatcaatatgaatatggaaaatactagaatgacttatactgtgga 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 167 bits (84), Expect = 9e-41
Identities = 136/152 (89%), Gaps = 1/152 (0%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||| |||||||||||||| ||| |||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggtaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||||| |||||| ||||||||||||| ||| ||||||||| | ||||||| |
Sbjct: 67 gaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatgtt 125
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 126 agaatgacttacattgtgaaacggagggagta 157
Score = 129 bits (65), Expect = 2e-29
Identities = 129/149 (86%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||| ||| |||||||| |||||||
Sbjct: 152 cctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaa 93
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||| |||| | | ||||||||||||| ||||||||| ||| | |||||||||||
Sbjct: 92 tctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| |||||||||| |||||||||| ||||
Sbjct: 33 atgacttacattgcgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||| ||||||||| ||||||||| |||| |||
Sbjct: 76 atctagattcattaccatcaatatgaatgtgagaaatgctagaatgacttacattgcgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| ||||| ||| ||||||||| || ||||||||| ||||||||
Sbjct: 86 atctagattcattaacattaatataaatatgggaaatgttagaatgacttacattgtgaa 145
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 146 acggagggagta 157
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 163 bits (82), Expect = 1e-39
Identities = 133/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||| ||||| || |||| ||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| |||||||||||||||||||||||||| ||||||||| ||| | ||||||||| ||
Sbjct: 93 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 2e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||| ||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | | |||||| |||| ||||||||||||| | |||||||||||
Sbjct: 70 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 127
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 128 atgacttacattgtgaaacggagggagta 156
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||| |||| ||||||||| |||||| |||||||| ||||||||| |||||||||||
Sbjct: 90 tagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacg 147
Query: 223 aagggagta 231
||||||||
Sbjct: 148 gagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 163 bits (82), Expect = 1e-39
Identities = 133/149 (89%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||| ||||| || |||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgttaataaa 67
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| |||||||||||||||||||||||||| ||||||||| ||| | ||||||||| ||
Sbjct: 68 tctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttga 127
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 128 atgacttacattgtgaaacggagggagta 156
Score = 139 bits (70), Expect = 2e-32
Identities = 130/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||| ||||||||| || |||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaa 92
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | | |||||| |||| ||||||||||||| | |||||||||||
Sbjct: 91 tctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct: 86 tctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtgaaa 145
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 146 cggagggagta 156
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||| |||| ||||||||| |||||| |||||||| ||||||||| |||||||||||
Sbjct: 71 tagatttattaacatcaatataaatgtg--aaatgctagaatgacttacattgtgaaacg 14
Query: 223 aagggagta 231
||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 161 bits (81), Expect = 5e-39
Identities = 135/153 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||| ||| |||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||| | ||||||||||||||||||||||| ||| ||||| ||| | ||||||||
Sbjct: 67 gaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
||||| |||||||||||||||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggagggagtaa 159
Score = 137 bits (69), Expect = 8e-32
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| |||||||||||| |||| |||| ||| | || |||||||||
Sbjct: 93 tctagacatatatatccaactagattcattaacatccatatgaatatgggtaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| |||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacattaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagtaa 232
|| |||||||||
Sbjct: 148 cggagggagtaa 159
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
|||||||||||| |||| |||||||| |||| ||||||| ||||||||| ||||||||||
Sbjct: 74 ctagattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaac 15
Query: 222 gaagggagta 231
| ||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 161 bits (81), Expect = 5e-39
Identities = 135/152 (88%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||| |||||||||||||||| ||| |||||| ||||||||||| || ||||
Sbjct: 7 cttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||| | ||||||||||||||||||||| ||||||||| ||| | |||||||||
Sbjct: 67 gaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatgct 124
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| |||||||||||| |||||||||||||
Sbjct: 125 agaatgacttacattgtggaacggagggagta 156
Score = 147 bits (74), Expect = 8e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||| |||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 151 cctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 92
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||||||||| |||||||| ||||||||| ||| ||| ||||||||||
Sbjct: 91 tctagaca--tatatatgtctacattcattaacatcaatatgaatgtagaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| |||||||||||| |||||||| ||||
Sbjct: 33 atgacttacattgtggaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||
Sbjct: 86 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaa 145
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 146 cggagggagta 156
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| ||||||||||||||| | |||||||| ||||||||| |||||| ||
Sbjct: 75 tctacattcattaacatcaatatgaatgtagaaaatgctagaatgacttacattgtggaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 134/152 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| | | ||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||||||||| ||||||| |||||||| ||||||||| ||| | | |||||
Sbjct: 67 gaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 127 agaatgacttacattgtgaaacggagggagta 158
Score = 157 bits (79), Expect = 8e-38
Identities = 133/151 (88%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| || |||| |||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| |||| | ||||| | ||||||||||||| ||||||||| ||| ||||||||||||||
Sbjct: 93 tatagacatctatatctatctagattcattaacatcaatatgaatataggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagtaaa 160
|| ||||||||||||||||||||| ||||||
Sbjct: 33 atgacttacattgtgaaacggaggaagtaaa 3
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||| | |||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagtaa 232
||| ||| |||||
Sbjct: 16 acggaggaagtaa 4
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| |||||||||||||| || | |||||| ||||||||| |||||||||
Sbjct: 88 tctatattcattaacatcaatatgaatgcggaatatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 157 bits (79), Expect = 8e-38
Identities = 137/156 (87%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatat----taatac 62
|||||||||||||||||||||||||||| ||| |||| || ||||||| | ||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgatgt 66
Query: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaa 122
|||||||||||||||||||||||||||||||||||||| ||||| ||| ||| | |||||
Sbjct: 67 taatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgggaaa 126
Query: 123 tgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||||||||||||||||||||||||||
Sbjct: 127 tgctagaatgacttacattgtgaaacggagggagta 162
Score = 119 bits (60), Expect = 2e-26
Identities = 130/153 (84%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||| | || |||||||
Sbjct: 157 cctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaa 98
Query: 70 tctagatagatatatatgtctagattcattagcatca----atataaatctaggaaatgc 125
|||||| | |||||| | ||||||||||||| ||||| ||| ||| | |||||||
Sbjct: 97 tctagacatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgc 38
Query: 126 tagaataacttacattgtgaaacggagggagta 158
|||||| ||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||
Sbjct: 92 tctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtgaaa 151
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 152 cggagggagta 162
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 181 tatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||| || ||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 55 tatgaatatgcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| || | | |||||| || |||||||||||||||| |||| ||| ||| ||||| ||||
Sbjct: 93 tttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 8e-32
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||||| | |||||||| || ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | |||||||||| || ||||||||||||| |||| ||| | | ||||||||||
Sbjct: 70 tctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||| ||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 226 ggagta 231
||||||
Sbjct: 153 ggagta 158
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||||||||||||| |||||||| | | ||||| || ||||||||| |||||||||||
Sbjct: 73 tagattcattagcatctatatgaatatagaaaatgttagaatgacttacattgtgaaacg 14
Query: 223 aagggagta 231
||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 131/149 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| |||||||||| | ||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||||||||||||||||||||||||||| |||||||| ||| | |||||| |||||
Sbjct: 70 tctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatactaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| |||||||||||||||||||||||||
Sbjct: 130 atgtcttacattgtgaaacggagggagta 158
Score = 145 bits (73), Expect = 3e-34
Identities = 130/149 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| |||| |||||||| ||||||||||||| ||| |||||||
Sbjct: 153 cctccgtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | ||||||||||||| ||||||||| | | |||| |||||
Sbjct: 93 tctagacatatatatctatctagattcattaacatcaatatttctagtgaaaatactaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||||||||||| ||| |||| |||| |||||||||
Sbjct: 88 tctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||| | | |||| ||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatttctagtgaaaatactagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 147 bits (74), Expect = 8e-35
Identities = 131/149 (87%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||||| ||||||| |||||||||| |||||||||||| | ||||||||||||
Sbjct: 70 tctagatag--gcatatgtccagattcattaacatcaatataaacgtgggaaatgctaga 127
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| ||||||||||||||| ||||
Sbjct: 128 atgacttatattgtgaaacggaggaagta 156
Score = 123 bits (62), Expect = 1e-27
Identities = 134/157 (85%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 2 aaattcttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaata 61
|||| |||||||||||||||||| ||||||||| ||| |||| |||| || ||||| ||
Sbjct: 159 aaatacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatg 100
Query: 62 ctaatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaa 121
|||||||||| || | || ||| |||||||||||| ||||||||| ||| | ||||
Sbjct: 99 ttaatgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaa 42
Query: 122 atgctagaataacttacattgtgaaacggagggagta 158
|||||||||| ||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 164 agattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacga 223
|||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||
Sbjct: 89 agattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacgg 148
Query: 224 agggagta 231
||| ||||
Sbjct: 149 aggaagta 156
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 137 bits (69), Expect = 8e-32
Identities = 128/149 (85%), Gaps = 9/149 (6%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 85
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| |||||||||||||||| ||||||||| ||| | ||||||||||||
Sbjct: 84 tctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 135 bits (68), Expect = 3e-31
Identities = 130/152 (85%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | ||||||||||||| ||||||||| ||| | |||||||||
Sbjct: 67 gaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatgct 117
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 118 agaatgacttacattgtgaaacggagggagta 149
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 138
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 139 cggagggagta 149
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 137 bits (69), Expect = 8e-32
Identities = 130/149 (87%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct: 147 cctccgtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaa 88
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||| ||||||| |||| |||||||||||||||| ||||| | ||||||||| |
Sbjct: 87 tctag--agatata----tctaaattcattagcatcaatgtaaatgtgagaaatgctaaa 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 137 bits (69), Expect = 8e-32
Identities = 131/152 (86%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| |||||| | ||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgctaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||||| ||| ||||||||||||||||||||||||||| | | |||||||
Sbjct: 67 gaatttagata------tatctctagattcattagcatcaatataaatgtggaaaatgct 120
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| ||||| ||||||||||||||||||||
Sbjct: 121 aaaatgacttatattgtgaaacggagggagta 152
Score = 117 bits (59), Expect = 7e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 82 tctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaa 141
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 142 cggagggagta 152
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||| |||||||||||||||| | |||||| ||||||||||||||||||| ||||||||
Sbjct: 76 atctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 3e-31
Identities = 131/152 (86%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| | | ||||||||||| || ||||
Sbjct: 156 cttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||| || | ||||||||||||||||| |||| |||| ||| |||| ||||||
Sbjct: 96 gaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||| ||||||||||||||||
Sbjct: 36 agaatgacttacattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| ||| | | |||||||| || |||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | | |||| ||||||||||||| |||| |||| ||| | | | |||||||
Sbjct: 70 tctagacatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||| ||||
Sbjct: 130 atgacttacattatgaaacggaggaagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||| | || ||||||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||| ||||||||||| | | ||||| ||||||||| ||| ||||
Sbjct: 87 atctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaa 146
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 147 acggaggaagta 158
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 131 bits (66), Expect = 5e-30
Identities = 129/149 (86%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||||| |||||||||| | || |||||||
Sbjct: 151 cctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaa 92
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||| ||||||||||||| |||||||| ||| | ||| ||| | |||||||| |||
Sbjct: 91 tctagat--atatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| ||||||||||||||| ||||
Sbjct: 33 atgacttatattgtgaaacggaggaagta 5
Score = 113 bits (57), Expect = 1e-24
Identities = 129/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| | | |||| ||||||||||| | || ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||| | |||||||| |||||||||||| ||| | ||| ||| | |||||||
Sbjct: 67 gaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatgct 124
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 125 agaatgacttacattgtgaaacggagggagta 156
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| | |||||||||| |||||||| ||||||||| ||||||||
Sbjct: 85 atctagattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacattgtgaa 144
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 145 acggagggagta 156
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| ||| | |||||||||||||||||| | |||||||||||||||||||
Sbjct: 75 tctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 129 bits (65), Expect = 2e-29
Identities = 128/149 (85%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||||||||| || | |||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| ||| ||||| |||||||||||||||| |||| |||| ||| | |||||| || |
Sbjct: 93 tctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaa 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||| ||||||||||||||||||
Sbjct: 33 atgacttacaatgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 2e-29
Identities = 128/149 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||| |||||||||||||| |||| ||||||||||| || |||||||
Sbjct: 10 cctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | ||||||| | ||||||||| | |||| |||| ||| | ||||||||||||
Sbjct: 70 tctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||| | |||| ||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 90 tagattcatcaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||| |||||| |||||||||||| | |||||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 127 bits (64), Expect = 8e-29
Identities = 131/156 (83%), Gaps = 13/156 (8%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| ||||||||||||| ||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat------ 60
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||| || | |||||||| |||| ||||||||||||| | ||||||||
Sbjct: 61 -------gatagatagatctatctagatttattaacatcaatataaatatgagaaatgct 113
Query: 127 agaataacttacattgtgaaacggagggagtaaatc 162
||||| ||||||||||||||||||||||||||||||
Sbjct: 114 agaatgacttacattgtgaaacggagggagtaaatc 149
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||| |||| ||||||||| ||| || ||||||||| ||||||||| ||||||||
Sbjct: 74 atctagatttattaacatcaatataaatatgagaaatgctagaatgacttacattgtgaa 133
Query: 220 acgaagggagtaa 232
||| |||||||||
Sbjct: 134 acggagggagtaa 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | |||||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| || ||| ||||| || |||| ||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgttaataaa 81
Query: 70 tctagatagat 80
|||||||||||
Sbjct: 80 tctagatagat 70
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 8e-29
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| || | |||||||||||| | | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | ||||||||||||||||||| ||||||||| ||| | |||||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 130 ataacttacattgtgaaacggaggga 155
|| |||||||||||||||||||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
Score = 111 bits (56), Expect = 4e-24
Identities = 123/146 (84%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||||||||| || ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||| |||||||||||||| ||||||| ||| | || ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 130 ataacttacattgtgaaacggaggga 155
|| |||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattgacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaaggga 228
|| |||||
Sbjct: 148 cggaggga 155
Score = 69.9 bits (35), Expect = 2e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 177 tcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaaca 234
|||||||||||||| || |||||| ||||||||| ||||||||||| ||||| |||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacattgtgaaacggagggaataaca 2
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 8e-29
Identities = 130/152 (85%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| | | ||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||| || | ||| ||||||||||||| |||| |||| ||| |||| ||||||
Sbjct: 67 gaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||| ||||||||||||||||
Sbjct: 127 agaatgacttacattatgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| ||| | | |||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||| | | |||| ||||||||||||| |||| |||| ||| | | | |||||||
Sbjct: 93 tctagatatagacatatatctagattcattaacatccatatgaatgtgagcattgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||| |||||||| | || ||||||| ||||||||| ||| ||||
Sbjct: 87 atctagattcattaacatctatatgaatataggcaatgctagaatgacttacattatgaa 146
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 147 acggagggagta 158
Score = 63.9 bits (32), Expect = 9e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||| ||||||||||| | | ||||| ||||||||| ||| ||||
Sbjct: 76 atctagattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 8e-29
Identities = 127/148 (85%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaatc 71
|||||| || ||||||||||||| || |||| |||||||||||| | |||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 72 tagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaat 131
|||||| ||||| |||||||||||||||| || | |||| ||| | | ||||||||||||
Sbjct: 72 tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131
Query: 132 aacttacattgtgaaacggagggagtaa 159
|||||||||||||||||||||||||||
Sbjct: 132 gacttacattgtgaaacggagggagtaa 159
Score = 121 bits (61), Expect = 5e-27
Identities = 127/149 (85%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | ||||||| ||||||||||||| || | |||| ||| | ||||||| ||||
Sbjct: 93 tctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| || |||||| ||||||
Sbjct: 33 atgacttacattatggaacggaaggagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || | |||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 88 tctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgtgaaa 147
Query: 221 cgaagggagtaa 232
|| |||||||||
Sbjct: 148 cggagggagtaa 159
Score = 63.9 bits (32), Expect = 9e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| || | |||||||||||||||||| || ||||||||| ||| || |
Sbjct: 76 atctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgga 17
Query: 220 acgaagggagta 231
||| | ||||||
Sbjct: 16 acggaaggagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 127 bits (64), Expect = 8e-29
Identities = 128/152 (84%), Gaps = 13/152 (8%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||| ||||||||||||||| ||| |||| |||||||||||
Sbjct: 143 cttcctccgttttacaatgtaagtcattctagcatttcccacattcata----------- 95
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||||||||||||||||||| ||||||||| ||| | ||||||||
Sbjct: 94 --atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||| ||||||||||||||||
Sbjct: 36 agaatgacttacattatgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| || ||||||||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgagaaatgctagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 67.9 bits (34), Expect = 6e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| || ||||||||| || |||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagatt 95
|||||| | |||||| | ||||||||
Sbjct: 70 tctagacatatatatctatctagatt 95
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 181 tatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||| ||||||||| ||||| ||||| ||| ||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||| ||||||||| ||||
Sbjct: 105 ggaaatgctagaatgacttacattgtaaaacggaggaagta 145
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 125 bits (63), Expect = 3e-28
Identities = 124/146 (84%), Gaps = 10/146 (6%)
Strand = Plus / Minus
Query: 13 ccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaatct 72
|||||||||||||||||||||| ||| |||| ||||||||||||| || ||||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat-- 83
Query: 73 agatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaata 132
|||||||||||||||||||| ||| ||||||||| | ||||||||||||||
Sbjct: 82 --------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatg 31
Query: 133 acttacattgtgaaacggagggagta 158
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
Score = 121 bits (61), Expect = 5e-27
Identities = 128/152 (84%), Gaps = 10/152 (6%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||| |||||||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||| |||||||| ||||||||| ||| | |||||||||
Sbjct: 67 gaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatgct 116
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| |||||||||||||||||| |||||||
Sbjct: 117 agaatgacttacattgtgaaacggggggagta 148
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgggg 142
Query: 226 ggagta 231
||||||
Sbjct: 143 ggagta 148
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 123 bits (62), Expect = 1e-27
Identities = 127/149 (85%), Gaps = 6/149 (4%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgag 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| |||||||||| |||||||||||| ||||||||| ||| | | ||||||||||
Sbjct: 70 tttagatagatacatatgtctagat------acatcaatatgaatatggaaaatgctaga 123
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 124 atgacttacattgtgaaacggaggaagta 152
Score = 105 bits (53), Expect = 3e-22
Identities = 127/152 (83%), Gaps = 6/152 (3%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||||||| |||||||| | ||
Sbjct: 150 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatat------tgat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
| ||||||| | || ||| | |||| | |||||| |||| |||| ||| | | |||||||
Sbjct: 96 gtatctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 168 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggg 227
|||||| |||| |||||||||||| |||||||| ||||||||| ||||||||||| ||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 228 agta 231
||||
Sbjct: 8 agta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 96 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 123 bits (62), Expect = 1e-27
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatctagatagatatatat 86
|||||||| ||| |||| |||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataactt 136
|||||||||||||| ||||||||| ||| | |||||||||||||| ||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 91.7 bits (46), Expect = 4e-18
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatctagatagatatatat 86
|||||||| ||| |||| ||||||||||||| || ||||||||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataactt 136
||||||||||||| ||||||||| ||| | ||||||||||||| ||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 62 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
|||||||||||||| |||||||||||||||| ||||||||| ||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 123 bits (62), Expect = 1e-27
Identities = 127/149 (85%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 147 cctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgag 88
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| |||||||||| |||||||||||| ||||||||| ||| | | ||||||||||
Sbjct: 87 tttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 113 bits (57), Expect = 1e-24
Identities = 128/152 (84%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccacattcatat------tgat 60
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
| ||||||| | || ||| | |||| | |||||| ||||||||| ||| | | ||| |||
Sbjct: 61 gtatctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaaggct 120
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 121 agaatgacttacattgtgaaacggagggagta 152
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 168 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggg 227
|||||| ||||||||||||||||| ||| |||| ||||||||| ||||||||||| ||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacattgtgaaacggaggg 148
Query: 228 agta 231
||||
Sbjct: 149 agta 152
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||| |||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 123 bits (62), Expect = 1e-27
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatctagatagatatatat 86
|||||||| ||| |||| ||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataactt 136
|||||||||||||| ||||||||| ||| | |||||||||||||| ||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 91.7 bits (46), Expect = 4e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatctagatagatatatat 86
|||||||| ||| |||| ||||||||||||| || ||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataactt 136
| ||||||||||| ||||||||| ||| | |||||||||||||| ||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 49 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 77.8 bits (39), Expect = 6e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 121 bits (61), Expect = 5e-27
Identities = 126/150 (84%), Gaps = 12/150 (8%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||| ||| ||| ||||| |||||||||||| || ||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||| ||| |||||||||||||||||||||| ||| |||||||| |
Sbjct: 70 tctagat------------ctaaattcattagcatcaatataaatgtagaaaatgctaaa 117
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| | |||||||||||||||||||||||||
Sbjct: 118 atgatttacattgtgaaacggagggagtaa 147
Score = 119 bits (60), Expect = 2e-26
Identities = 125/149 (83%), Gaps = 12/149 (8%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||| ||||||||| |||||| ||||| ||||| || ||||||||
Sbjct: 141 cctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgctaatgaa 82
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| ||||| |||||||||||||||||||||| ||| | ||||||||||
Sbjct: 81 tttagat------------ctagattcattagcatcaatatgaatgtgaaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|||||||||||||||||||||||||||||
Sbjct: 33 ataacttacattgtgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||
Sbjct: 76 atctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||| |||||||||||||||||| ||||| | |||||||||||||| ||| ||||||||
Sbjct: 75 atctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaa 134
Query: 220 acgaagggagtaaca 234
||| |||||||||||
Sbjct: 135 acggagggagtaaca 149
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 121 bits (61), Expect = 5e-27
Identities = 126/150 (84%), Gaps = 12/150 (8%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||||||||| || ||| ||||| || ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgctaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||| ||| |||||||||||||||||| ||| ||| ||||||||||
Sbjct: 70 tctagat------------ctaaattcattagcatcaatatgaatgtagaaaatgctaga 117
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| | |||||||||||||||||||||||||
Sbjct: 118 atgatttacattgtgaaacggagggagtaa 147
Score = 111 bits (56), Expect = 4e-24
Identities = 124/149 (83%), Gaps = 12/149 (8%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||| ||||| ||| |||||| ||||||||||| || ||||||||
Sbjct: 141 cctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgctaatgaa 82
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| ||||| |||||||||||||||||||||||||| | |||| |||||
Sbjct: 81 tttagat------------ctagattcattagcatcaatataaatatgaaaaatactaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||| |||||||||||||||||||||||| | |||||||| ||||| ||| ||||||||
Sbjct: 75 atctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaa 134
Query: 220 acgaagggagtaaca 234
||| |||||||||||
Sbjct: 135 acggagggagtaaca 149
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||||||||||||| ||| || |||| ||| ||||||||| ||||||||
Sbjct: 76 atctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 121 bits (61), Expect = 5e-27
Identities = 129/152 (84%), Gaps = 6/152 (3%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| || |||| ||||||||||||| || |||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtcaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | | |||||||||||||| ||||||||| ||| | |||||||||
Sbjct: 67 gaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaatgct 120
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||| ||||||||||||||||
Sbjct: 121 agaatgacttacattatgaaacggagggagta 152
Score = 115 bits (58), Expect = 3e-25
Identities = 126/149 (84%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| ||||||||||||| || ||||||
Sbjct: 147 cctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaa 88
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| |||| ||||||||||||| ||||||||| ||| | ||||||| ||||
Sbjct: 87 tctagacagat------gtctagattcattgacatcaatatgaatgtgggaaatgataga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 82 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 141
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 142 cggagggagta 152
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| ||||||||||||||||||||||| || ||||||||| |||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | || ||| ||| |||||| ||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||| | | ||| ||||||||||||||||||||||| | || ||| | || ||||||
Sbjct: 67 gaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagta 158
Score = 73.8 bits (37), Expect = 1e-12
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||| ||| ||| |||||| | || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | || ||| ||| ||||||||||| ||| |||| || | || |||||||||
Sbjct: 93 tctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||||||||||||||| ||||
Sbjct: 33 aagtcttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||| | |||||| |||| ||||||| || | |||| |||||||||
Sbjct: 88 tctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||| ||||| ||||||| ||||||| || | |||| |||||||||||
Sbjct: 73 tagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacg 14
Query: 223 aagggagta 231
||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 119 bits (60), Expect = 2e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 atctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaa 120
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 121 acggagggagta 132
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||| |||||||||||||||| ||||||||
Sbjct: 127 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaa 68
Query: 70 tctagata 77
||||||||
Sbjct: 67 tctagata 60
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||||||| ||||| ||| | |||||||||||||| ||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 122 cggagggagta 132
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| ||| |||||| ||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||||| | || | ||||||||||||||| |||| |||| ||| | || ||||||
Sbjct: 67 gaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||| ||||||||||||||||
Sbjct: 127 agaatgacttacattatgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| ||| ||| |||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | || ||| |||| |||||||| |||| |||| || | || |||||||||
Sbjct: 93 tctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||| |||| ||||||| ||||||||| ||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatatgggtaatgctagaatgacttacattatgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 126/148 (85%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| | | |||||||| | || ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| ||||||||||||||||||||||| || | || |||| ||| | ||||||||||||
Sbjct: 70 tctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagt 157
|| ||||||||| |||||||||||||||
Sbjct: 130 atgacttacattatgaaacggagggagt 157
Score = 115 bits (58), Expect = 3e-25
Identities = 127/150 (84%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| |||||||||||| | || ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||| | | |||||||| || | || |||| ||| ||||||||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| ||||||||| |||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagtaa 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||| || | || ||||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 88 tctagattcactaacctccatatgaatgtgggaaatgctagaatgacttacattatgaaa 147
Query: 221 cgaagggagt 230
|| |||||||
Sbjct: 148 cggagggagt 157
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 119 bits (60), Expect = 2e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 76 atctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||| |||||||||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaa 69
Query: 70 tctagata 77
||||||||
Sbjct: 70 tctagata 77
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||||||| ||||| ||| | |||||||||||||| ||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 130 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 80
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 119 bits (60), Expect = 2e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 tctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaa 138
Query: 221 cgaagggagtaa 232
|| |||||||||
Sbjct: 139 cggagggagtaa 150
Score = 117 bits (59), Expect = 7e-26
Identities = 131/153 (85%), Gaps = 9/153 (5%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||| ||||||||||||||||| || ||| |||| ||||||| || |||||
Sbjct: 7 cttcctctgtttcacaatgtaagtc-ttctagcatttcccacattgatgttaat------ 59
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||||||||| |||||||||||||||| ||||||||| ||| | |||||||||
Sbjct: 60 gaatctagatagatat--atgtctagattcattaacatcaatatgaatatgggaaatgct 117
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
| ||| ||||| |||||||||||||||||||||
Sbjct: 118 aaaatgacttatattgtgaaacggagggagtaa 150
Score = 87.7 bits (44), Expect = 6e-17
Identities = 86/99 (86%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||||||| |||| ||| ||||||||| || |||||||
Sbjct: 144 cctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaa 85
Query: 70 tctagatagatatatatgtctagattcattagcatcaat 108
||||| | |||||| | ||||||||||||| |||||||
Sbjct: 84 tctag--acatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 2e-26
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||||| || ||||||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||||| ||||||||||||||| |||| |||| ||| | | ||||||
Sbjct: 67 gaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||| ||||||||||||||||
Sbjct: 127 agaaagtcttacattatgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 4e-18
Identities = 124/150 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||| | || ||| ||| || |||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgctcatattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||||||||||||||||||||| |||| |||| ||| | || ||| |||||
Sbjct: 93 tctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
| ||||||||| ||||||||||| |||||
Sbjct: 33 aagacttacattatgaaacggaggaagtaa 4
Score = 63.9 bits (32), Expect = 9e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||| ||| || |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaa 16
Query: 221 cgaagggagtaa 232
|| ||| |||||
Sbjct: 15 cggaggaagtaa 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||| || | ||||||| || | |||| ||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 117 bits (59), Expect = 7e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 222 gaagggagtaa 232
| ||| |||||
Sbjct: 14 ggaggaagtaa 4
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaat 66
Query: 67 gaatctag 74
||||||||
Sbjct: 67 gaatctag 74
Score = 95.6 bits (48), Expect = 3e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 169 cattagcatcaatatgaatgtgggaaatgctaaa-atgacttatattgtgaaacgaaggg 227
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 139
Query: 228 agta 231
||||
Sbjct: 140 agta 143
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 89 ctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaac 148
|||||||||||||||||||||| ||| | |||||||||| ||| ||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 149 ggagggagtaa 159
||||| |||||
Sbjct: 14 ggaggaagtaa 4
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 117 bits (59), Expect = 7e-26
Identities = 127/152 (83%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| |||||||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||| ||||||| ||||||| ||||||||| ||| | |||||||||
Sbjct: 67 gaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatgct 114
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| |||||||||||||||| |||||||||
Sbjct: 115 agaatgacttacattgtgaaaccgagggagta 146
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||| ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 76 tctagtttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 135
Query: 221 cgaagggagta 231
| ||||||||
Sbjct: 136 ccgagggagta 146
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 223 aagggagta 231
||| ||||
Sbjct: 13 gaggaagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 120/149 (80%), Gaps = 12/149 (8%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||| |||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 141 cctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 82
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||| | ||||||||||| ||||||||| ||| | | ||||||||||
Sbjct: 81 actagaca------------tagattcattaacatcaatatgaatgtggaaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 117 bits (59), Expect = 7e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 222 gaagggagtaa 232
| ||| |||||
Sbjct: 134 ggaggaagtaa 144
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||
Sbjct: 141 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgctaat 82
Query: 67 gaatctag 74
||||||||
Sbjct: 81 gaatctag 74
Score = 95.6 bits (48), Expect = 3e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 169 cattagcatcaatatgaatgtgggaaatgctaaa-atgacttatattgtgaaacgaaggg 227
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggg 9
Query: 228 agta 231
||||
Sbjct: 8 agta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 89 ctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaac 148
|||||||||||||||||||||| ||| | |||||||||| ||| ||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 149 ggagggagtaa 159
||||| |||||
Sbjct: 134 ggaggaagtaa 144
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 115 bits (58), Expect = 3e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||| |||||||||||| ||||| ||||||||||| || |||||||
Sbjct: 151 cctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgttaatgaa 92
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | |||||||||||| ||||||||| |||| | || ||| | |||||||||| |
Sbjct: 91 tcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgctaaa 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 3e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| |||||||||| | || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||| || | ||||||||| ||||||||||| |||| |||| ||| | |||||||
Sbjct: 67 gaatcaag--acatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| |||| |||| ||||||||||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggagggagta 156
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaa 224
||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 71 gattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Query: 225 gggagta 231
|| ||||
Sbjct: 11 ggaagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||||| ||||||||||||||||| ||| |||||||
Sbjct: 88 tagattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcattatgaaacg 147
Query: 223 aagggagta 231
||||||||
Sbjct: 148 gagggagta 156
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 223 aagggagta 231
||||||||
Sbjct: 132 gagggagta 140
Score = 95.6 bits (48), Expect = 3e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||||| ||||||||||| ||||||||| ||| | |||||||||||||| ||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 143 tgaaacggagggagta 158
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggag 229
|||| ||| |||||||||||||||||||||| ||||||||| ||||||||||| ||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 230 ta 231
||
Sbjct: 6 ta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaa 76
Query: 70 tcta 73
||||
Sbjct: 75 tcta 72
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 97 attagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggag 156
|||| ||| ||||| ||| | |||||||||||||| ||||||||||||||||||||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 157 ta 158
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 4e-24
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| ||| |||||| |||| || ||||
Sbjct: 156 cttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||||| | || | ||||||||||||||| |||| |||| ||| | || ||||||
Sbjct: 96 gaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||| ||||||||||||||||
Sbjct: 36 agaatgacttacattatgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 2e-20
Identities = 125/150 (83%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| ||| | |||||||||| || |||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | || ||| |||| |||||||| |||| ||||| || | || |||||||||
Sbjct: 70 tctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
|| ||||||||| ||||||||||| |||||
Sbjct: 130 atgacttacattatgaaacggaggaagtaa 159
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||||| || ||||||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgttggtaatgctagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 111 bits (56), Expect = 4e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 64 atctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaa 123
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 124 acggagggagta 135
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | ||||||| |||||| ||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 125 cggagggagta 135
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtaa 4
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcattttccacattcatatt 57
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| || |||| ||||||||||||| || |||||||
Sbjct: 130 cctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaa 71
Query: 70 tctagata 77
||||||||
Sbjct: 70 tctagata 63
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagtaa 159
||||||||| ||| | | |||||||||||| ||||| ||||||||||||||| |||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 109 bits (55), Expect = 2e-23
Identities = 64/67 (95%)
Strand = Plus / Minus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaa 224
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 225 gggagta 231
|||||||
Sbjct: 11 gggagta 5
Score = 107 bits (54), Expect = 7e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaa 224
|||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 225 gggagtaaca 234
||||||||||
Sbjct: 132 gggagtaaca 141
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgga 151
||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 152 gggagta 158
|||||||
Sbjct: 11 gggagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgga 151
||||||||||||||||||| ||| | |||||||||||||| ||||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 152 gggagtaa 159
||||||||
Sbjct: 132 gggagtaa 139
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 80 tatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttaca 139
||||||||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 140 ttgtgaaacggagggagta 158
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggaggtagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggtagta 5
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 69
Query: 70 tctaga 75
||||||
Sbjct: 70 tctaga 75
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 102 aaatgctagaatgacttacattgtgaaacggaggaagta 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||| |||| |||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 84 catcaatatgtatgtacaaaatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 107 bits (54), Expect = 7e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 164 agattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacga 223
||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 224 agggagtaac 233
||| ||||||
Sbjct: 128 aggaagtaac 137
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 91 agattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgg 150
|||||||||||||||||||| ||| | ||||||||||||| ||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 151 agggagtaa 159
||| |||||
Sbjct: 128 aggaagtaa 136
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 168 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggg 227
||||||||||||||||||||||| ||||||||| ||||||||| || ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 228 agta 231
||||
Sbjct: 8 agta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| ||| |||| |||||||||||| || |||||
Sbjct: 133 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgctaat 74
Query: 67 gaatct 72
||||||
Sbjct: 73 gaatct 68
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 95 tcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggaggg 154
|||||||||||||||| ||| | ||||||||||||| |||||||| ||||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 155 agta 158
||||
Sbjct: 8 agta 5
Score = 54.0 bits (27), Expect = 9e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatga 68
|||| ||||||| |||||||||||| ||| |||| |||||||||||| || |||||||
Sbjct: 10 cctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 107 bits (54), Expect = 7e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 85 atgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtg 144
|||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 145 aaacggagggagta 158
|||||||||||||
Sbjct: 18 gaacggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| ||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||||||| |||| |||| ||||||||||| ||| ||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||| |||| ||| |||| |||||||||||||
Sbjct: 130 cttcctccgtttcacaatgtaagacattctagcatttcccacattcatatt 80
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||| |||||||||||||||| ||| |||| ||| ||| ||||| || ||||||||
Sbjct: 10 cctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaa 69
Query: 70 tctaga 75
||||||
Sbjct: 70 tctaga 75
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 76 catcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 146 aacggagggagta 158
|||||||||||||
Sbjct: 127 aacggagggagta 139
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 129 cggagggagta 139
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||| ||||||||| || |||||||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 75
Query: 70 tctaga 75
||||||
Sbjct: 74 tctaga 69
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 45 ggaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 182 atgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||| |||||||||||| ||||||||| ||| ||||||| ||| ||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 82 tatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 142 gtgaaacggagggagta 158
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 172 tagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 80 tagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| || ||| ||||| || |||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgctaat 66
Query: 67 gaatctaga 75
|||||||||
Sbjct: 67 gaatctaga 75
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 99 tagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||| | | |||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 80 tagcatcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 223 aagggagta 231
||||||||
Sbjct: 132 gagggagta 140
Score = 87.7 bits (44), Expect = 6e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||||| ||||||||||| ||||||||| ||| | | |||||||||||| ||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 143 tgaaacggagggagta 158
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaat 60
|||||||||||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaat 60
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||||||||||||||||| || |||||||
Sbjct: 135 cctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaa 76
Query: 70 tcta 73
||||
Sbjct: 75 tcta 72
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggag 229
|||| ||| |||||||||||||||||||||| ||||||||| ||||||||||| ||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 230 ta 231
||
Sbjct: 6 ta 5
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 97 attagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggag 156
|||| ||| ||||| ||| | |||||||||||||| ||||||||||||||||||||| ||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 157 ta 158
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 105 bits (53), Expect = 3e-22
Identities = 128/152 (84%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| | || ||| ||| ||||||||||||| ||| ||||
Sbjct: 154 cttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgttaat 95
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | ||||| |||||||||||| ||||||||| ||| |||| ||||||
Sbjct: 94 gaatctagacacgcatatac--ctagattcattaacatcaatatgaatataggcaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||| ||||||||||||||||
Sbjct: 36 agaaagtcttacattatgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
|||||||||||| ||||||||||||| | || ||||||| || | |||| ||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 222 gaagggagta 231
| ||||||||
Sbjct: 14 ggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| |||||||||||| ||||||| || | |||| ||| |||||
Sbjct: 86 tctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaa 145
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 146 cggaggaagta 156
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 82 tatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
||||||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 142 gtgaaacggagggagta 158
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 67 gaatctaga 75
|||||||||
Sbjct: 67 gaatctaga 75
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 130 ataacttacattgtgaaacggagggagta 158
|||||||||||||||||||||||||||||
Sbjct: 79 ataacttacattgtgaaacggagggagta 107
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 105 bits (53), Expect = 3e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtactaat 69
Query: 67 gaatctaga 75
|||||||||
Sbjct: 68 gaatctaga 60
Score = 91.7 bits (46), Expect = 4e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacat 140
||||||||||||||||||||| | ||||| ||| | |||||||||||||| ||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 141 tgtgaaacggagggagta 158
||||||||||||| ||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 120 cggaggaagta 130
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||||||||||| ||| ||| |||| |||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||| ||||||||| ||| ||||| ||||||||||| ||| ||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 146 aacggagggagta 158
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||| ||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 70 tctaga 75
||||||
Sbjct: 70 tctaga 75
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 99 ggaaatgctagaatgacttacattatgaaacggaggaagta 139
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 182 atgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||| |||||||||||| ||||||||| ||| ||||||| ||| ||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 159 aatctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtga 218
||||||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||
Sbjct: 77 aatctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 219 aacgaagggagta 231
|||| ||||||||
Sbjct: 17 aacggagggagta 5
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 159 aatctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtga 218
||||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||| |||
Sbjct: 68 aatctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatga 127
Query: 219 aacgaagggagta 231
|||| ||| ||||
Sbjct: 128 aacggaggaagta 140
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | |||||||||||||| ||||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 148 cggagggagta 158
|||||| ||||
Sbjct: 130 cggaggaagta 140
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||| ||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaa 69
Query: 70 tctagat 76
|||||||
Sbjct: 70 tctagat 76
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||
Sbjct: 65 atctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaa 124
Query: 220 acgaagggagtaa 232
||| |||||||||
Sbjct: 125 acggagggagtaa 137
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | ||||||| |||||| |||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 148 cggagggagtaa 159
||||||||||||
Sbjct: 126 cggagggagtaa 137
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || |||| ||||||||||||| || |||||||
Sbjct: 131 cctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaa 72
Query: 70 tctagatagatat 82
|||||||||||||
Sbjct: 71 tctagatagatat 59
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||| |||||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| ||| |||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 57
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 95.6 bits (48), Expect = 3e-19
Identities = 122/149 (81%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||||||||||| |||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| ||||||||||||| ||||||||| ||| ||| ||||||||||
Sbjct: 70 tctaga------------tctagattcattaacatcaatatgaatatagtaaatgctaga 117
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| |||||| |||||||| ||||
Sbjct: 118 atgacttatattgtggaacggaggaagta 146
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||| | | |||||||| |||||||||||||||| |
Sbjct: 75 atctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtgga 134
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 135 acggaggaagta 146
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | ||||||| || ||| ||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| || ||| || ||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||||| | | |||||| ||||||||||| |||| |||| ||| | || ||||||
Sbjct: 67 gaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| ||||||||| ||||||||||||||||
Sbjct: 127 aaaatgacttacattatgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 7e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||||||| ||| |||||||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | | || | ||| ||||||||||||| |||| |||| || | || || ||||||
Sbjct: 93 tctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaaggctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||| ||||
Sbjct: 33 atgacttacattatgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||||||| ||||||||||||||||| ||| |||||||
Sbjct: 90 tagattcattaccatctatatgaatgtgggcaatgctaaaatgacttacattatgaaacg 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||| ||||| || |||| || |||| ||||||||| ||| ||||
Sbjct: 76 atctagattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 103 bits (52), Expect = 1e-21
Identities = 123/149 (82%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||||||||||||| || ||||| |
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgta 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||| ||||| ||||| ||||||||| ||| | ||||||||||||
Sbjct: 70 tctagata------------tagatacattaacatcaatatgaatgtgggaaatgctaga 117
Query: 130 ataacttacattgtgaaacggagggagta 158
|| |||||||||||| |||||||| ||||
Sbjct: 118 atgacttacattgtggaacggaggaagta 146
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||| ||||| ||||||||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 76 atctagatacattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 124/152 (81%), Gaps = 12/152 (7%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||| |||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 144 cttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgttaat 85
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
| ||||| || |||||| ||||| ||||||||| ||| | | |||||||
Sbjct: 84 gtatctatat------------ctagatacattaacatcaatatgaatgtggaaaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 78 tagatacattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtggaacg 137
Query: 223 aagggagta 231
||| ||||
Sbjct: 138 gaggaagta 146
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 1e-21
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| | || ||| ||| |||||||||||| || |||||
Sbjct: 7 cttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgctaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||| ||| ||| ||||||||||||||||||||| |||| ||| | || |||| |
Sbjct: 67 aaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatgtt 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||| ||||||||||||| |||| || || | |||| |||||||||
Sbjct: 88 tctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || || ||| |||||||||||| || ||||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | ||||| | |||||| ||||||||| |||| ||| | || ||||||| |
Sbjct: 93 tctagacattattatatatatagatttattagcatctatatgaatgtgggtaatgctata 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| ||||||||||| ||||
Sbjct: 33 aagtcttacattatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||| ||||||||| ||||||||||||| ||||||| || | |||| ||| |||||||
Sbjct: 73 tagatttattagcatctatatgaatgtgggtaatgctataaagtcttacattatgaaacg 14
Query: 223 aagggagta 231
||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| ||||
Sbjct: 75 atctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaa 134
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 135 acggagggagta 146
Score = 95.6 bits (48), Expect = 3e-19
Identities = 122/149 (81%), Gaps = 12/149 (8%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||||||||||| |||| ||||||||||||| || |||||||
Sbjct: 141 cctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaa 82
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||| |||||||||||| ||||||||| ||| ||| ||||||||||
Sbjct: 81 tctagat------------ctagattcattaacatcaatatgaatatagtaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||| |||||| |||||||| ||||
Sbjct: 33 atgacttatattgtggaacggaggaagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||| | | |||||||| |||||||||||||||| |
Sbjct: 76 atctagattcattaacatcaatatgaatatagtaaatgctagaatgacttatattgtgga 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | ||||||| || ||| ||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 63 atcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaa 122
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 123 acggaggaagta 134
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| |||| ||||||||||||| || ||||
Sbjct: 132 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgttaat 73
Query: 67 gaatctagata 77
||||| |||||
Sbjct: 72 gaatcaagata 62
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgga 151
||||||||| ||||||||| ||| | |||||||||| ||| |||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 152 gggagta 158
|| ||||
Sbjct: 128 ggaagta 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttggcattttccacattcatatt 57
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||| |||||| ||||||||||| ||||||||||| | ||||||
Sbjct: 61 catcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | | |||||| | ||| ||||||||||||||||||| ||||||
Sbjct: 61 catcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 56 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaa 115
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 116 acggaggaagta 127
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| ||| |||| |||||||||||| || ||||
Sbjct: 125 cttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaat 66
Query: 67 gaatctagatag 78
||||||||||||
Sbjct: 65 gaatctagatag 54
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | ||||||||||||| ||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 148 cggagggagta 158
|||||| ||||
Sbjct: 117 cggaggaagta 127
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattt 43
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 192 gaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 113 cggagggagta 123
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||| ||||
Sbjct: 52 atctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaa 111
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 112 acggagggagta 123
Score = 71.9 bits (36), Expect = 4e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| | ||||||||||| || |||||||
Sbjct: 118 cctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaa 59
Query: 70 tctagata 77
||||||||
Sbjct: 58 tctagata 51
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttcca 47
|||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttcca 47
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 193 aaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 101 bits (51), Expect = 4e-21
Identities = 125/152 (82%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||| ||||||||||||||||||||||| ||| |||| |||||||||||| || ||||
Sbjct: 7 cttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||| ||||||||||| |||||||||||| | | |||||||
Sbjct: 67 gaatctagatg------------tagattcattaatatcaatataaatatggaaaatgct 114
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||||||||||||||||||||||||
Sbjct: 115 agaatgacttacattgtgaaacggagggagta 146
Score = 97.6 bits (49), Expect = 7e-20
Identities = 117/142 (82%), Gaps = 12/142 (8%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||| ||| ||||| ||| |||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatattaatgaa 82
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| || |||||||||||| ||||||||| ||| | |||||||||||
Sbjct: 81 tctacat------------ctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 130 ataacttacattgtgaaacgga 151
|| |||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacgga 12
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 220 acg 222
|||
Sbjct: 16 acg 14
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||| ||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacg 137
Query: 223 aagggagta 231
||||||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggag 229
|||| ||||||||||||||||| |||| ||||||||||||| ||||||||||| ||| ||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 230 taa 232
|||
Sbjct: 6 taa 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 84 tatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgt 143
||||| || ||| |||| ||||||||| ||| | | |||| ||| ||| |||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 144 gaaacggagggagtaa 159
|||||||||| |||||
Sbjct: 19 gaaacggaggaagtaa 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 134 cttacattgtgaaacggagggagta 158
|||||||||||||||||||||||||
Sbjct: 86 cttacattgtgaaacggagggagta 110
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | | |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaa 69
Query: 70 tctaga 75
||||||
Sbjct: 70 tctaga 75
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 137 cggagggagta 147
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||||||||||||||||| |||||||||||| || |||||||
Sbjct: 142 cctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaa 83
Query: 70 tctaga 75
||||||
Sbjct: 82 tctaga 77
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
||||||||||||||| ||||||||| ||| | ||||| ||| ||| |||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 146 aacggagggagta 158
|||||||||||||
Sbjct: 135 aacggagggagta 147
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggag 229
|||| ||||||||| |||||| |||| ||||||||||||| |||||||||| ||||||
Sbjct: 66 attaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagagggag 7
Query: 230 ta 231
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 101 bits (51), Expect = 4e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 128 cttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgttaat 69
Query: 67 gaatcta 73
|||||||
Sbjct: 68 gaatcta 62
Score = 99.6 bits (50), Expect = 2e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 223 aagggagtaa 232
||| |||||
Sbjct: 122 gaggaagtaa 131
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatttttgtattttccacattcatatt 57
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||| |||| | ||||||||||| ||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| ||||||||| ||| | | |||| ||| ||| ||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 150 gagggagtaa 159
|||| |||||
Sbjct: 122 gaggaagtaa 131
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 133 acttacattgtgaaacggagggagta 158
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 101 bits (51), Expect = 4e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| ||| |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||| | | |||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||| | ||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaa 69
Query: 70 tctagata 77
||||||||
Sbjct: 70 tctagata 77
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggag 229
|||| ||||||||||||||| |||||| || ||||||||||||||||||||| ||| ||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 230 ta 231
||
Sbjct: 137 ta 138
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||| ||||||||| || ||||| | |||||||||||
Sbjct: 136 cttcctccgtttcacaatataagtcattctactatttcctacattcatatt 86
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 97 attagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggag 156
|||| ||||||||| ||| |||||||| |||||| ||||| ||||||||||||||| ||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 157 ta 158
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| ||| |||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaa 134
Query: 221 cgaagggagtaaca 234
|| |||||||||||
Sbjct: 135 cggagggagtaaca 148
Score = 97.6 bits (49), Expect = 7e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaa 146
|||||||||||||| ||||||||| ||| | | |||||||||||| ||||||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 147 acggagggagtaa 159
|||||||||||||
Sbjct: 134 acggagggagtaa 146
Score = 95.6 bits (48), Expect = 3e-19
Identities = 118/144 (81%), Gaps = 13/144 (9%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||| ||||||||| || |||||||
Sbjct: 140 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 81
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| ||||||| |||| ||||||||||||| | |||||||||||
Sbjct: 80 tctaga-------------ctagatttattaacatcaatataaatgtgagaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagg 153
|| ||||||||| |||||||||||
Sbjct: 33 atgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 2e-20
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||||||| ||||| ||| | |||||| || ||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgttaat 69
Query: 67 gaatctagatagatatatatgt 88
||||||||||||||||| ||||
Sbjct: 68 gaatctagatagatataaatgt 47
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||| | ||| |||||||||||||||||| ||||||||
Sbjct: 59 atctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaa 118
Query: 220 acgaagggagtaa 232
||| ||| |||||
Sbjct: 119 acggaggaagtaa 131
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||| |||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 cctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| |||||||||||| ||||||||||||| ||||| ||||| ||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagtaaa 160
|||||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 92 aaatgctaaaatgacttacattgtgaaacggaggaagtaaa 132
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 107 atataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| | |||||| ||| ||| ||||||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 2e-20
Identities = 125/150 (83%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||||||| |||| | ||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| ||| ||| |||||||||||||||||| |||| | || ||| | || |||||||||
Sbjct: 93 tctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
| |||||||||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggaggaagtaa 4
Score = 63.9 bits (32), Expect = 9e-10
Identities = 122/152 (80%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | || ||| ||| ||| |||||| | || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | || ||| | | ||||||||||| |||| |||| | | || ||| ||
Sbjct: 67 gaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaatact 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| | |||||| |||| ||||||| || | |||| |||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaa 16
Query: 221 cgaagggagtaa 232
|| ||| |||||
Sbjct: 15 cggaggaagtaa 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||| | ||||| ||| ||| || | |||| |||||||||||
Sbjct: 90 tagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtgaaacg 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 97.6 bits (49), Expect = 7e-20
Identities = 85/96 (88%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaa 122
||||| |||||||||||||| |||||||||| ||||| ||||||||| ||| | |||||
Sbjct: 36 taatggatctagatagatat--atgtctagatccattaacatcaatatgaatgtgggaaa 93
Query: 123 tgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||||||||| ||||||||||| ||||
Sbjct: 94 tgctagaatgacttacattatgaaacggaggaagta 129
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 119 cggaggaagta 129
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 127 cttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgttaat 68
Query: 67 gaatctaga 75
| |||||||
Sbjct: 67 ggatctaga 59
Score = 58.0 bits (29), Expect = 6e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 130 ataacttacattgtgaaacggagggagta 158
|||||||||||||||||||||||||||||
Sbjct: 33 ataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 164 agattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacga 223
|||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 224 agggagtaa 232
||| |||||
Sbjct: 12 aggaagtaa 4
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 91 agattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgg 150
|||||||||| ||||||||| ||| | |||||||||||||| ||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 151 agggagtaa 159
||| |||||
Sbjct: 12 aggaagtaa 4
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggtaat 66
Query: 67 gaatct 72
||||||
Sbjct: 67 gaatct 72
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggag 229
|||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 230 ta 231
||
Sbjct: 136 ta 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 97 attagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggag 156
|||| ||||||||| ||| | |||||||||||||| |||||| |||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 157 ta 158
||
Sbjct: 136 ta 137
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||| |||||||||| ||| |||| |||||||||||||
Sbjct: 132 cctccgtttcacaaagtaagtcattctagcatttcccacattcatatt 85
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 7e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | |||||| ||| ||||||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | || ||||| ||||| ||||||| |||| |||| ||| | || ||| |||||
Sbjct: 93 tctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||| ||| ||||||||||||||||
Sbjct: 33 aagtcttatattatgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||| |||| | || ||||||| ||| |||||||| || |||||||
Sbjct: 10 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||| ||| |||||||||||||||||| |||| |||| ||| | | ||| ||| |
Sbjct: 70 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 129
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||||||||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||||||| ||| |||||| | |||| |||||||||
Sbjct: 88 tctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| ||||||||||| | | | ||||||||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 150 gagggagta 158
|||||||||
Sbjct: 13 gagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||| ||| ||| |||||||||| | ||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaa 69
Query: 70 tctagatagatata 83
|||| |||||||||
Sbjct: 70 tctatatagatata 83
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||| | ||||| |||||||| ||| ||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 223 aagggagta 231
||||||||
Sbjct: 13 gagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 133 acttacattgtgaaacggagggagta 158
||||||||||||||||||||||||||
Sbjct: 101 acttacattgtgaaacggagggagta 126
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcat 33
||||||||||||||||||||||||
Sbjct: 121 cctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 97.6 bits (49), Expect = 7e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaa 59
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 107 cttcctccgtttcacaatgtaagtcattttagtatttcccacattcatattaa 55
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
|||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagtaa 110
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcatttta 37
||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatttta 37
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 133 acttacattgtgaaacggagggagta 158
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||| ||| ||| ||||||||||||||||||||| |||||
Sbjct: 69 ggaaatactaaaatgacttacattgtgaaacggaggaagtaa 110
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 199 taaaatgacttatattgtgaaacgaagggagta 231
|||||||||||| ||||||||||| ||||||||
Sbjct: 37 taaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 223 aagggagta 231
||||||||
Sbjct: 13 gagggagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| |||| |||| ||| | |||||||||||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 150 gagggagta 158
|||||||||
Sbjct: 13 gagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 84 ggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaa 69
Query: 70 tcta 73
||||
Sbjct: 70 tcta 73
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 119 cctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 97.6 bits (49), Expect = 7e-20
Identities = 117/142 (82%), Gaps = 12/142 (8%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||| ||| ||||| ||| |||||||
Sbjct: 141 cctccgtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaa 82
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| || |||||||||||| ||||||||| ||| | |||||||||||
Sbjct: 81 tctacat------------ctagattcattaacatcaatatgaatgtgagaaatgctaga 34
Query: 130 ataacttacattgtgaaacgga 151
|| |||||||||||||||||||
Sbjct: 33 atgacttacattgtgaaacgga 12
Score = 93.7 bits (47), Expect = 1e-18
Identities = 124/152 (81%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||| ||||||||||||||||||||||| ||| |||| |||||||||||| || ||||
Sbjct: 7 cttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||||| ||||||||||| |||||||||||| | | |||||||
Sbjct: 67 gaatctagatg------------tagattcattaatatcaatataaatatggaaaatgct 114
Query: 127 agaataacttacattgtgaaacggagggagta 158
| ||| ||||||||||||||||||||||||||
Sbjct: 115 ataatgacttacattgtgaaacggagggagta 146
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 220 acg 222
|||
Sbjct: 16 acg 14
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||| ||| ||| |||||||| ||||||||| |||||||||||
Sbjct: 78 tagattcattaatatcaatataaatatggaaaatgctataatgacttacattgtgaaacg 137
Query: 223 aagggagta 231
||||||||
Sbjct: 138 gagggagta 146
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 223 aagggagta 231
||| ||||
Sbjct: 124 gaggaagta 132
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacattcatatt 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 85 atgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtg 144
|||| ||||||||||| ||||||||| ||| | ||| |||||||||| ||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 145 aaacggagggagta 158
||||||||| ||||
Sbjct: 119 aaacggaggaagta 132
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | | |||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| ||| || | ||||||||||||| || ||||
Sbjct: 130 cttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaat 71
Query: 67 gaatcta 73
|||||||
Sbjct: 70 gaatcta 64
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 1 gaaattcttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaat 60
||||| |||||||||||||| ||||||||||||| ||| |||| ||||||||||||| ||
Sbjct: 119 gaaatacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 60
Query: 61 actaatgaatctagata 77
| |||||||||||||||
Sbjct: 59 attaatgaatctagata 43
Score = 87.7 bits (44), Expect = 6e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||
Sbjct: 44 atctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaa 103
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 104 acggaggaagta 115
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||| ||||||||||||| |||||||| ||| | |||||||||||||| |||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 143 tgaaacggagggagta 158
||||||||||| ||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 122 atgctagaataacttacattgtgaaacggagggagta 158
|||||||||| ||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 195 atgctaaaatgacttatattgtgaaacgaagggagta 231
|||||| ||||||||| ||||||||||| ||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcatt 34
|||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 7e-20
Identities = 124/149 (83%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | ||||| ||| ||||||||| || || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||||| |||| | ||||||||||||||| |||| |||| ||| | | ||||||||
Sbjct: 93 tctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctagg 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||||||||||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | | ||| ||| ||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | |||||| ||||||||||||| |||| || | ||| | || |||| || |
Sbjct: 70 tctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatgttaaa 129
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||||||||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||| || |||||||||| |||| ||||| | |||| ||||||||
Sbjct: 87 atctagattcattaacatctatgtgaatgtgggcaatgttaaaaagtcttacattgtgaa 146
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 147 acggagggagta 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||| | ||||||| | | |||| |||||||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 223 aagggagta 231
||||||||
Sbjct: 122 gagggagta 130
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| ||||||||| ||| | |||||||||||||| ||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 150 gagggagta 158
|||||||||
Sbjct: 122 gagggagta 130
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 170 attagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
|||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaac 11
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||| |||||||||||||||||||| ||| |||| ||||||||||||| || |||||||
Sbjct: 125 cctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaa 66
Query: 70 tcta 73
||||
Sbjct: 65 tcta 62
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||| |||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 3 cttcctctgtttcacaatataagtcattatagcattttccacattcatatt 53
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 7e-20
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | |||||| ||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | || ||||| ||||| ||||||| |||| |||| ||| | || ||| |||||
Sbjct: 70 tctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaatactaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||| ||| ||||||||||||||||
Sbjct: 130 aagtcttatattatgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||| |||| | || ||||||| ||| |||||||| || |||||||
Sbjct: 153 cctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||||| ||| |||||||||||||||||| |||| |||| ||| | | ||| ||| |
Sbjct: 93 cctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaa 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||||||||||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||||||| ||| |||||| | |||| |||||||||
Sbjct: 75 tctagattcattaacatctatatgaatgtggacaatcctaaaaagtcttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||| ||||
Sbjct: 133 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatattaat 74
Query: 67 gaatctaga 75
|||||||||
Sbjct: 73 gaatctaga 65
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 80 tatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttaca 139
||||||||||||||||||||| || ||||| ||| | |||||||||||||| |||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 140 ttgtgaaacggagggagta 158
|||||||||||||| ||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 125 cggaggaagta 135
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||| ||||||||| ||||||||| | ||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatta 58
||||| ||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 10 cctccatttcacaatgtaagtcattctagcatttcccacattcatatta 58
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 97.6 bits (49), Expect = 7e-20
Identities = 121/144 (84%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| ||| |||||||| ||| |||||||||||
Sbjct: 151 cctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaa 92
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||| | ||||||||| |||||||||| |||| |||| ||| | || |||||||||
Sbjct: 91 tctag--ccacatatatgtccagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 130 ataacttacattgtgaaacggagg 153
|| ||||| ||| |||||||||||
Sbjct: 33 atgacttatattatgaaacggagg 10
Score = 87.7 bits (44), Expect = 6e-17
Identities = 125/151 (82%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 8 ttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatg 67
||||||||||||| ||| ||||||||| ||| ||| |||||||||||| || |||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 68 aatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgcta 127
||||| || | ||||| || ||||||||||||| ||| ||| ||| | || ||| |||
Sbjct: 68 aatctggaca--tatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 128 gaataacttacattgtgaaacggagggagta 158
|||| ||||| ||||||||||||||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagta 156
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||||| ||| ||| ||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 87 ctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtgaaac 146
Query: 222 gaagggagta 231
| ||||||||
Sbjct: 147 ggagggagta 156
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 164 agattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||||||| |||| ||||||||||||| ||||||| ||||||||||||| |||||||
Sbjct: 72 agattcattaacatctatatgaatgtgggcaatgctagaatgacttatattatgaaacg 14
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 97.6 bits (49), Expect = 7e-20
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||||| || ||| |||||||| |||||||||||| ||||
Sbjct: 132 cttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgttaat 73
Query: 67 gaatctagatagatatatatg 87
|||||||||| |||||||||
Sbjct: 72 gaatctagatgaatatatatg 52
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| ||||||||| ||| |||||||| || |||||| ||||||||
Sbjct: 63 atctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaa 122
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 123 acggaggaagta 134
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||| ||||| ||| | | ||||||||||| |||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 148 cggagggagta 158
|||||| ||||
Sbjct: 124 cggaggaagta 134
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagtaaat 161
||||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 43 aaatgatagaatgacttacattatgaaacggagggagtaaat 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
|||||||||||| ||||| || ||||||||| ||| ||||||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagtaa 4
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaa 224
||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 225 gggagtaa 232
|| |||||
Sbjct: 11 ggaagtaa 4
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgga 151
||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 152 gggagtaa 159
|| |||||
Sbjct: 11 ggaagtaa 4
Score = 85.7 bits (43), Expect = 3e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaa 224
||||||||| |||||||||||||||| ||||||||| ||||| ||| ||||||||||| |
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 225 gggagta 231
|||||||
Sbjct: 135 gggagta 141
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaat 66
Query: 67 gaatc 71
|||||
Sbjct: 67 gaatc 71
Score = 77.8 bits (39), Expect = 6e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgga 151
||||||||| ||||||||| ||| | ||||||||||||| | |||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 152 gggagta 158
|||||||
Sbjct: 135 gggagta 141
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||| ||||| ||| |||| |||||||||||| || |||||||
Sbjct: 136 cctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgttaatgaa 77
Query: 70 tc 71
||
Sbjct: 76 tc 75
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaa 146
|||||||||||||||||||||||| ||| | |||||| ||||||| ||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 147 acggagggagta 158
||||||||||||
Sbjct: 125 acggagggagta 136
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 126 cggagggagta 136
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| |||||||| ||| ||||||||| || ||||||||
Sbjct: 131 cctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaa 72
Query: 70 tctaga 75
||||||
Sbjct: 71 tctaga 66
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 99 tagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||| | ||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 64 tagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||| ||| |||||||| || |||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtaattctagtatttctcatattcatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 172 tagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| || ||||| ||| ||| ||||| ||||||||||| ||| ||||
Sbjct: 64 tagcatcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 168 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggg 227
|||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 228 agta 231
||||
Sbjct: 8 agta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttccacattcatatt 57
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||| |||||||||||| | ||| ||||||||||| ||||||||
Sbjct: 72 catcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 95 tcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggaggg 154
|||||| ||||||||| ||| | | |||||||| ||| ||||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 155 agta 158
||||
Sbjct: 8 agta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||| | ||||||| ||||||||||||||||||
Sbjct: 123 cctccgtttcacaatgtaatttattttagcattttccacattcatatt 76
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | | |||||||| ||||| ||||||||||||||||||||||||
Sbjct: 72 catcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 177 tcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||| ||||||||| ||| |||| |||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 7 cttcctccgttt-cacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||| |||||| ||||||||| ||| |||| |||||||||||||
Sbjct: 114 cttcctccgttttcacaatataagtcattctagcatttcccacattcatatt 63
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 104 tcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||| ||| | |||||||||||||| ||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 76 atctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 16 acggagggagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||||||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatattaatgaa 69
Query: 70 tctagata 77
||||||||
Sbjct: 70 tctagata 77
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| |||||||| ||| | ||||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||| |||||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 86 catcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| ||| |||||||||
Sbjct: 140 cttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 90
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 93.7 bits (47), Expect = 1e-18
Identities = 126/152 (82%), Gaps = 9/152 (5%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| ||| |||||||||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||| | || | ||| ||||||| ||||||||| ||| | ||||||||
Sbjct: 67 gaatctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaatgct 117
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| |||||||||||||||| |||||||||
Sbjct: 118 agaatgacttacattgtgaaaccgagggagta 149
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 223 aagggagta 231
||| ||||
Sbjct: 13 gaggaagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 167 ttcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagg 226
||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||| |||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaaccgagg 144
Query: 227 gagta 231
|||||
Sbjct: 145 gagta 149
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| ||||||||| ||| | | |||||||||||| ||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 150 gagggagta 158
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 93.7 bits (47), Expect = 1e-18
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
|||||||||||||| ||||||||| ||| | |||||||||||||| |||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 146 aacggagggagta 158
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| ||||||||||||| || |||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtcaat 66
Query: 67 gaatctaga 75
|||||||||
Sbjct: 67 gaatctaga 75
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | |||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 79 catcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||| ||||||||||||| ||| |||| |||||||||||||
Sbjct: 130 cctccgtttcataatgtaagtcattctagcatttcccacattcatatt 83
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 93.7 bits (47), Expect = 1e-18
Identities = 123/149 (82%), Gaps = 7/149 (4%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| || ||||| ||||||||||||| || |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||| || || || || ||||||| ||||||||||||| | |||||| |||||
Sbjct: 70 actacatctattta-------agtttcattaacatcaatataaatgtgggaaatactaga 122
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||||||||||||||| ||||
Sbjct: 123 atgacttacattgtgaaacggaggaagta 151
Score = 91.7 bits (46), Expect = 4e-18
Identities = 125/152 (82%), Gaps = 7/152 (4%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| |||||||| ||||||| ||||| || ||||
Sbjct: 149 cttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgttaat 90
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||| || || ||| | ||| ||||||| ||||||||| ||| | |||||| |
Sbjct: 89 gaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaataat 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
||||| ||||| ||||||||||||||||||||
Sbjct: 36 agaatgacttatattgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 167 ttcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagg 226
||||||| |||||||||||||||||||||| || ||||||||||||||||||||| |||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 227 gagta 231
|||||
Sbjct: 9 gagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 167 ttcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagg 226
||||||| ||||||||| |||||||||||| ||| ||||||||| ||||||||||| |||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 227 gagta 231
||||
Sbjct: 147 aagta 151
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 76 atctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaa 17
Query: 220 ac 221
||
Sbjct: 16 ac 15
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||| |||||| ||| ||||||||| ||| |||||||||||||||| | || |||||
Sbjct: 7 cttcctctgtttcataatataagtcattctagcattttccacattcatactgatgctaat 66
Query: 67 gaatctagatag 78
||||||||||||
Sbjct: 67 gaatctagatag 78
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | |||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 82 catcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||| ||||||||||||| ||| |||| |||||||||||||
Sbjct: 133 cctccgtttcataatgtaagtcattgtagcatttcccacattcatatt 86
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||||||||| ||| ||| | | |||||||||||| ||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 148 cggagggagta 158
| |||| ||||
Sbjct: 15 cagaggaagta 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatatt 214
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 55 tctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttatatt 108
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgactta 210
||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgactta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattagcatcaatataaatctaggaaatgctagaataactta 137
|||||||||||||||||||||||||||||| ||| | ||||||||||||| |||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
|||||||||||||||||| ||| | ||||||||||||| |||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 26 taagtcattttagtattttccacattcatattaatactaatgaatctaga 75
||||||||| ||| |||| |||||||||||| || ||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctaga 55
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 4e-18
Identities = 124/150 (82%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||||| | ||| |||||||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| |||| | |||||||||||||||||||| |||| |||| ||| | || ||| |||||
Sbjct: 70 tttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaatactaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
| ||||||||||||||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagtaa 159
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||||||| |||||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||| |||||| |||||||| |||| |||| ||| | || | | |||||
Sbjct: 93 tctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||||||||||||||||||||
Sbjct: 33 aagtcttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||| ||| || | |||| |||||||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtgaaa 147
Query: 221 cgaagggagtaa 232
|| |||||||||
Sbjct: 148 cggagggagtaa 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| |||| |||||||| |||| | | ||| || | |||| |||||||||
Sbjct: 75 tctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 4e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 153 ggagta 158
| ||||
Sbjct: 109 gaagta 114
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||| ||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 226 ggagta 231
| ||||
Sbjct: 109 gaagta 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 182 atgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| | ||||||||||| || ||||
Sbjct: 112 cttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgttaat 53
Query: 67 gaat 70
||||
Sbjct: 52 gaat 49
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcat 54
||||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 62 tctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaa 121
Query: 221 cg 222
||
Sbjct: 122 cg 123
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||||||| ||||||| ||||||||| || ||||
Sbjct: 130 cttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataat 71
Query: 67 gaatctagatagatatat 84
||||||||| | ||||||
Sbjct: 70 gaatctagacatatatat 53
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
|||||||||||||||||||||| ||||||||| ||| | |||||||| ||| |||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 139 attgtgaaacggagg 153
|||||||||||||||
Sbjct: 113 attgtgaaacggagg 127
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaac 148
|||||||||||||| ||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaac 15
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 15 gtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||||||| ||| |||| || |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 91.7 bits (46), Expect = 4e-18
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| |||||||| || ||| ||||| || ||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgataat 66
Query: 67 gaatctagatagatatatatgt 88
||||||||||||||||||||||
Sbjct: 67 gaatctagatagatatatatgt 88
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
|||||| | ||||||||||||| ||||||||||||| | ||||| ||||||| |||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 139 attgtgaaacggagggagta 158
||||||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||| ||| || ||||| ||| ||||||||||||||||||
Sbjct: 76 atctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| ||||||||| ||||||||||||||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagta 128
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattt 43
||||||||||| ||||||||||||| ||| ||||
Sbjct: 123 cctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 4e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacga 223
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacga 106
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 14 cgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaat 70
|||| ||||||| |||||||||||| |||| ||||||||||||| || |||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| | ||||||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 182 atgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||||||||| ||||| ||| ||||||||||| ||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
|||||||||||||||||| ||| | |||||||||| ||| |||| ||||||| ||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcat 54
||||||||||||||||||| ||||| ||| |||| |||||||||
Sbjct: 10 cctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||| | || ||| ||| |||||||||||| || ||||||||
Sbjct: 153 cctccgtttcataatgtaagactttctagcattgcccacattcatatatatgctaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
||||| | | ||||||||||||||||||||| ||| |||||||| | || || ||||||
Sbjct: 93 tctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| |||||| |||| ||||
Sbjct: 33 aagtcttacattatgaaacagaggaagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||| |||||| |||||||| | || ||| || ||||||| |||| ||||||||
Sbjct: 7 cttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatactaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||| | || |||||||||||||||| |||| ||| | || ||||||
Sbjct: 67 gaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
|||| |||||||| |||||||||||||||||
Sbjct: 127 agaaagtcttacattatgaaacggagggagtaa 159
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
|||||||||||||||| ||||||||||||| ||||||| || | |||| ||| ||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 222 gaagggagtaac 233
| ||||||||||
Sbjct: 149 ggagggagtaac 160
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcata 55
|||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 181 tatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||| |||| ||| ||||||||| ||||||||||| ||| ||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || ||||| ||| | ||||| ||| |||||||||||||||||||
Sbjct: 69 tctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaa 128
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 129 cggaggaagta 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattt 43
|||||||||||||||||| ||||||||| ||| ||||
Sbjct: 137 cttcctccgtttcacaatataagtcattctaggattt 101
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||| ||||||| ||||| ||||||||||||||| ||||
Sbjct: 100 gaaatcctagaatgacttatattgtgaaacggaggaagta 139
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| ||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaacg 14
Query: 223 aagggagta 231
|| |||||
Sbjct: 13 gagagagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||||| ||||||||||| ||||||||| ||| | ||||||| |||||| ||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 143 tgaaacggagggagta 158
|||||||||| |||||
Sbjct: 20 tgaaacggagagagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 119/148 (80%), Gaps = 15/148 (10%)
Strand = Plus / Plus
Query: 11 ctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaat 70
|||||||||||||||||||||||| || |||| ||||||||||||| || ||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 71 ctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaa 130
| || | || ||||||||||||| ||||||||| | |||||||||||
Sbjct: 71 c--------taaacatatctagattcattaacatcaatat-------gaaaatgctagaa 115
Query: 131 taacttacattgtgaaacggagggagta 158
| |||||||||||||||||||| |||||
Sbjct: 116 tgacttacattgtgaaacggagagagta 143
Score = 52.0 bits (26), Expect = 4e-06
Identities = 60/72 (83%), Gaps = 7/72 (9%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||
Sbjct: 79 atctagattcattaacatcaatatga-------aaatgctagaatgacttacattgtgaa 131
Query: 220 acgaagggagta 231
||| || |||||
Sbjct: 132 acggagagagta 143
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||| | || ||| || ||||||||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | | | |||||||||||||||||||| |||| |||| ||| ||| |||||||||
Sbjct: 93 tctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| ||||||||||| ||||
Sbjct: 33 aagtcttacattatgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 124/153 (81%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| | || ||| ||| || |||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||| | ||| ||||||||||| |||| |||| ||| | | || ||
Sbjct: 67 gaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaacct 126
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
|||| |||||||| |||||||||||||||||
Sbjct: 127 agaaagtcttacattatgaaacggagggagtaa 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||||| | ||||||| || | |||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| |||||||||||| || ||| || | |||| ||| |||||||
Sbjct: 90 tagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatgaaacg 149
Query: 223 aagggagtaac 233
||||||||||
Sbjct: 150 gagggagtaac 160
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||| ||| || ||||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| ||| ||||| |||||||||||||||||||| || | ||| | || |||||||||
Sbjct: 93 tctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| ||||||||||| ||||
Sbjct: 33 aagtcttacattatgaaacggaggaagta 5
Score = 89.7 bits (45), Expect = 2e-17
Identities = 126/153 (82%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| | || ||| ||| ||||||||| || || |||||
Sbjct: 7 cttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgctaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | ||||| | | ||||||||||| |||| |||| ||| || ||||||
Sbjct: 67 gaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
|||| ||||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagtaa 159
Score = 67.9 bits (34), Expect = 6e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||| ||| ||||||| || | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacg 149
Query: 223 aagggagtaa 232
|||||||||
Sbjct: 150 gagggagtaa 159
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||| || |||||||||| ||||||| || | |||| ||| |||||
Sbjct: 75 tctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||||||||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtaa 4
Score = 87.7 bits (44), Expect = 6e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaac 233
|||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtaac 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| ||||||| ||||| ||| |||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatattaataaa 69
Query: 70 tctagatagatat 82
| |||||| ||||
Sbjct: 70 tttagataaatat 82
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 2 aaattcttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||| |||||||||||||||||| ||||||||| ||| |||| |||||||||||||
Sbjct: 139 aaatacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 2e-17
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | |||||| ||| |||||||| || | ||| ||||
Sbjct: 154 cttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatattaat 95
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatata 111
||||||||||| || ||| | ||||||||||||| |||| |||||
Sbjct: 94 gaatctagatatatgtatgtttctagattcattaacatctatata 50
Score = 56.0 bits (28), Expect = 2e-07
Identities = 79/96 (82%)
Strand = Plus / Plus
Query: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaa 122
||||||||||||| | ||| |||| ||||||||||||| ||| | |||||| | | ||
Sbjct: 61 taatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaa 120
Query: 123 tgctagaataacttacattgtgaaacggagggagta 158
||||| || |||||||||||||||||||| ||||
Sbjct: 121 tgctaaaaagtcttacattgtgaaacggaggaagta 156
Score = 48.1 bits (24), Expect = 6e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||| | || ||||||| |||||||||| | |||| ||||||||
Sbjct: 85 atctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtgaa 144
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 145 acggaggaagta 156
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||| | |||||| ||| ||||||||||| || |||||||
Sbjct: 10 cctccgtttcataatgtaagactttttagcattcctcacattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | |||||| ||||||||||||| |||| |||| ||| | || |||||||||
Sbjct: 70 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 129
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| ||||||||||| ||||
Sbjct: 130 aagtcttacattatgaaacggaggaagta 158
Score = 87.7 bits (44), Expect = 6e-17
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| | || ||| ||| |||||||||||| || ||||
Sbjct: 156 cttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||| | ||||||||||||||| |||| |||| ||| | | ||||||
Sbjct: 96 gaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
| || |||||||| ||||||||||||||||
Sbjct: 36 aaaaagtcttacattatgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||| | |||||||||| | |||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||||||| || | |||| ||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 147
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 123/149 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| |||||||| | |||||| ||| ||||||||||| || |||||||
Sbjct: 153 cctccgtttcataatgtaagactttttagcattgctcacattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | | |||||| ||||||||||||| |||| |||| ||| | || |||||||||
Sbjct: 93 tctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| ||||||||||| ||||
Sbjct: 33 aagtcttacattatgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 6e-17
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| | || ||| ||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||| | ||||||||||||||| |||| |||| ||| | | ||||||
Sbjct: 67 gaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
| || |||||||| ||||||||||||||||
Sbjct: 127 aaaaagtcttacattatgaaacggagggagta 158
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||| | |||||||||| | |||| ||| |||||
Sbjct: 88 tctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||||||| || | |||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtaa 4
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||| |||| || ||||| |||||||||||| || ||||
Sbjct: 128 cttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgttaat 69
Query: 67 gaatctagatagatat 82
||||||||||||||||
Sbjct: 68 gaatctagatagatat 53
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttatattgtgaaacggagggagtaa 4
Score = 63.9 bits (32), Expect = 9e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||||||||||||||| ||||| || |||| |||| ||| ||||
Sbjct: 59 atctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaa 118
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 119 acggaggaagta 130
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||| ||||||||| ||| |||| ||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| ||||||||| ||| | ||||| |||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 148 cggagggagta 158
|||||| ||||
Sbjct: 120 cggaggaagta 130
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 87.7 bits (44), Expect = 6e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||||||||| | | |||||||||||| |||||||||||||||||||||||||||
Sbjct: 60 atcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaa 4
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||||||| ||||| ||| |||| ||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcattttccacatttatattgatattaataaa 69
Query: 70 tctagatagatat 82
| |||||| ||||
Sbjct: 70 tttagataaatat 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaac 233
|||||||| ||||||| |||||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 60 atcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaac 3
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 2 aaattcttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||| |||||||||||||||||| ||||||||| ||| |||| |||||||||||||
Sbjct: 139 aaatacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 84
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 6e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 164 agattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacga 223
|||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 224 agggagta 231
||| ||||
Sbjct: 128 aggaagta 135
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 60 atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||| ||||||||| ||| |||| ||||||||| ||| ||| ||||
Sbjct: 133 cttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatattaat 74
Query: 67 gaatct 72
||||||
Sbjct: 73 gaatct 68
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 91 agattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacgg 150
|||||||||| |||||| | ||| | |||||||||||||| ||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 151 agggagta 158
||| ||||
Sbjct: 128 aggaagta 135
Score = 54.0 bits (27), Expect = 9e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatga 68
||||||||||||||| ||||||||| ||| |||| |||||||| ||| ||| ||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttcacacattcacattgatattaatga 68
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 173 agcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 63 agcatcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 100 agcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||| || | |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 63 agcatcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| ||| |||| |||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgttcatatt 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 67 ggaaatgctagaatgatttacattgtaaaacggagggagtaa 108
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 187 tgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaaca 234
|||||||||||||| ||||| ||| ||||| ||||| |||||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagtaaca 110
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||| || | |||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 74 tctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 133
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 134 cggaggaagta 144
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||| | |||||||||||||||||||||||||| |||| |||| ||||||||||| ||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 226 ggagta 231
||||||
Sbjct: 10 ggagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
|||||||||| || | ||||||||| ||| | |||||||||||||| |||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 146 aacggagggagta 158
|||||||| ||||
Sbjct: 132 aacggaggaagta 144
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct: 142 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 92
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||| | ||||||||| ||| | |||||||||||||| |||||||||||||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggag 11
Query: 153 ggagta 158
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 85.7 bits (43), Expect = 3e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 94 ttcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagg 153
||||||| ||||| ||||||| | |||||||||||||| ||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 154 gagta 158
|||||
Sbjct: 117 gagta 121
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 167 ttcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagg 226
||||||| ||||| ||| |||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 227 gagta 231
|||||
Sbjct: 117 gagta 121
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 45 ggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacatt 51
||||||||||||||| ||||||||| ||| |||| |||||||
Sbjct: 116 cctccgtttcacaatctaagtcattctagcatttcccacatt 75
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 126 cggaggaagta 136
Score = 77.8 bits (39), Expect = 6e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 80 tatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttaca 139
|||| ||||||||||| |||| ||||||||| ||| | |||||||||| ||| |||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 140 ttgtgaaacggagggagta 158
|||||||||||||| ||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||| |||||||||||| |||| ||| ||||||||| || ||||
Sbjct: 134 cttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgttaat 75
Query: 67 gaatctaga 75
||||||||
Sbjct: 74 aaatctaga 66
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattca 53
|||||||||||||||||||||||| ||| |||||||| |||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 45 ggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 183 tgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||| ||| ||| ||||| ||||||||||| ||| ||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 3e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 177 tcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 79.8 bits (40), Expect = 2e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||| ||||||||| ||| |||| |||||||||||||
Sbjct: 112 cttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 104 tcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||| ||| | |||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||| ||||||||| ||| | ||||||||||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagca-tttccacattcatatt 56
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||||||||||||||||| ||||| || ||||||||||||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 129 cggaggaagta 139
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
||||||||||||||||||| ||||||||| ||| | | ||||| |||||| ||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 142 gtgaaacggagggagta 158
||||||||||| ||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||| ||||||||| || |||||||||||||||||| || ||||
Sbjct: 137 cttcctccgtttcataatataagtcattctaacattttccacattcatattgatgttaat 78
Query: 67 gaatctaga 75
|||||||||
Sbjct: 77 gaatctaga 69
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacatt 51
||||||||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttttcacatt 51
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
|||||||||||||||||| ||| ||||| ||| | ||||||||||||| |||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 142 gtgaaacggaggga 155
||||||||||||||
Sbjct: 122 gtgaaacggaggga 135
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaaca 234
|||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggagggaataaca 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||| ||| |||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 221 cgaaggga 228
|| |||||
Sbjct: 128 cggaggga 135
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggaggga 155
||||||||| ||| | ||||||||||||| |||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||| |||||||||||| || ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 70 tctaga 75
||||||
Sbjct: 73 tctaga 68
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 1e-15
Identities = 123/150 (82%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||| ||||||| | || ||||| | ||| |||||||| || |||||||
Sbjct: 10 cctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgttaatgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
| |||| | |||||||||||||||||||| |||| |||| ||| | || ||| |||||
Sbjct: 70 tttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaatactaga 129
Query: 130 ataacttacattgtgaaacggagggagtaa 159
| ||||||||||||||||||||||||||
Sbjct: 130 aagtcttacattgtgaaacggagggagtaa 159
Score = 73.8 bits (37), Expect = 1e-12
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||||||| ||| |||||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | |||| |||||| |||||||| |||| |||| ||| | || | | |||||
Sbjct: 93 tctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| ||||||| |||||||||||||||||
Sbjct: 33 aagtcttacatggtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||| |||| ||| ||| || | |||| |||||||||
Sbjct: 88 tctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtgaaa 147
Query: 221 cgaagggagtaa 232
|| |||||||||
Sbjct: 148 cggagggagtaa 159
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 1e-15
Identities = 123/150 (82%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||| ||| |||| || ||||| || |||||||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgttaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| ||| ||| | |||||||||||||||| || | | || ||| | || |||||||||
Sbjct: 93 tctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
| |||||||||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggaggaagtaa 4
Score = 71.9 bits (36), Expect = 4e-12
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | || ||| ||| |||||||||| | | ||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | | ||||| | ||||||||||| |||| |||| || | | ||||||
Sbjct: 67 gaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| || | | ||||||||||| ||||||| || | |||| |||||||||
Sbjct: 75 tctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaa 16
Query: 221 cgaagggagtaa 232
|| ||| |||||
Sbjct: 15 cggaggaagtaa 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||| || ||| ||||||| || | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtgaaacg 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||||||||||||||||| ||| ||||| || ||||||||| ||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 222 gaagggagta 231
| ||||||||
Sbjct: 122 ggagggagta 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 89 ctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaac 148
|||||||||||||||||||||| || | ||||| |||||| ||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 149 ggagggagta 158
||||||||||
Sbjct: 122 ggagggagta 131
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| || ||||| ||| |||||||| || ||||||||
Sbjct: 126 cctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaa 67
Query: 70 tctag 74
|||||
Sbjct: 66 tctag 62
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggga 228
|||||||| || |||||| || ||||||||||||||||||||| |||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggaggga 155
|||||| |||||| ||||| |||||||||||||||||
Sbjct: 44 gaaatgatagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 83.8 bits (42), Expect = 1e-15
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
||||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||
Sbjct: 61 catcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagtaa 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 45 ggaaatgctagaataacttatattgtgaaacggagggagtaa 4
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattt 43
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 124 cttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattca 53
||||||||||||||| ||||| ||| ||| |||| |||||||||
Sbjct: 10 cctccgtttcacaatataagttattctagcatttcccacattca 53
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 192 gaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 1e-15
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 85 atgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtg 144
|||| ||||||||| | ||||||||| ||| | | |||||||||||||||||||||||||
Sbjct: 77 atgtttagattcataa-catcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 145 aaacggagggagta 158
||||||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||||||| |||||||||
Sbjct: 129 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatatt 79
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | | |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 75 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 75 catcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 159 aatctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtga 218
|||||||||||||||||||| |||||||| |||| ||||||| || | |||||||| |||
Sbjct: 68 aatctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatga 127
Query: 219 aacgaagggagta 231
|||| ||||||||
Sbjct: 128 aacggagggagta 140
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 159 aatctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtga 218
||||||||||||||| |||| |||||||| || | ||||||| || |||||||||| |||
Sbjct: 77 aatctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatga 18
Query: 219 aac 221
|||
Sbjct: 17 aac 15
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
|||||||||||||||||| |||| ||| | || |||||||||| |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 148 cggagggagta 158
|||||||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 81.8 bits (41), Expect = 4e-15
Identities = 125/152 (82%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||||| || ||| ||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||||||| | | | |||||||||||||||||| |||| | || ||| || | ||||||
Sbjct: 67 gaatctag--acacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 127 agaataacttacattgtgaaacggagggagta 158
| || |||||||| ||||||||||||||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagta 156
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||||||| || |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
||||||||||||||| |||| |||| ||| | || |||||||||| ||||||||| |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 146 aacggagggagta 158
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 81.8 bits (41), Expect = 4e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacg 14
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatta 58
|||||||||||||||||| ||||||||| ||| |||| ||||||||||||||
Sbjct: 117 cttcctccgtttcacaatataagtcattctagcatttcccacattcatatta 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacgga 151
||||||||| ||| | |||||||||||||| ||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 79 ggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 12 tccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||| ||||||||| ||| |||| ||| |||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatatt 57
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
|||||| |||| ||||||||||| | | | |||||||||||| |||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 150 gagggagta 158
|||||||||
Sbjct: 131 gagggagta 139
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||| |||| ||||||||| | ||||| |||||||| ||||||||| |||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 223 aagggagta 231
||||||||
Sbjct: 131 gagggagta 139
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||||||||||||| ||| |||||||||| | ||||| || |||| ||
Sbjct: 134 cctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaa 75
Query: 70 tctagatagata 81
|||| |||||||
Sbjct: 74 tctatatagata 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||| | |||| |||||||||||||||||| ||||||||| | ||||||||
Sbjct: 60 atcaatataattgtgaaaaatgctaaaatgacttacattgtgaaatggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccaca 49
||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 10 cctccatttcacaatgtaagtcattttagcatttttcaca 49
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 4e-15
Identities = 122/149 (81%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||| |||||| ||||||||||||| ||| ||||| |||||||| | || || ||||
Sbjct: 153 cctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | ||||| || |||||||| || |||| |||| ||| | |||||||||||
Sbjct: 93 tctagacatatatacatacttagattcactaacatctatatcaatatgagaaatgctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| ||||||||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| || ||| |||| || || ||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaa 69
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| || |||||||||||||||||| || |||| | | ||| | |||||||| |
Sbjct: 70 tctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctaca 129
Query: 130 ataacttacattgtgaaacggagggagta 158
|| ||||||||| |||||| |||||||||
Sbjct: 130 atgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 165 gattcattagcatcaatatgaatgtgggaaatgctaaaatga 206
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaataactt 136
||||||||||||||||||| ||| | |||||||||||||| ||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 92 gattcattagcatcaatataaatctaggaaatgctagaat 131
||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaat 85
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatc 71
|||||||| ||| |||| ||||||||||||| || ||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 44.1 bits (22), Expect = 9e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 30 tcattttagtattttccacattcatattaatactaatgaatc 71
||||| ||| |||| ||||||||||||| || ||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 81.8 bits (41), Expect = 4e-15
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatac 62
||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatac 62
Score = 73.8 bits (37), Expect = 1e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 6e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatac 62
||||||||||||||||||||| ||| ||| |||| ||||||||||||| ||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcatttnccacattcatattgatac 68
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 4e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| ||||||||||||| |||||||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgttaat 66
Query: 67 gaatctaga 75
|||||||||
Sbjct: 67 gaatctaga 75
Score = 77.8 bits (39), Expect = 6e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||||||||||||||| ||||| ||| ||||||||| ||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacat 140
|||| ||||||||||||||| ||||||||| ||| | ||||| ||||||| ||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 141 tgtgaaacggagggagta 158
| ||||||||||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||| ||||||||| ||||||||| ||| ||||| | ||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 91 gaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||| ||||| ||||||||||||| ||| |||| ||||||||||||
Sbjct: 125 cctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 167 ttcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagg 226
||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 227 gagta 231
||||
Sbjct: 9 aagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 94 ttcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagg 153
||||||| ||||||||| ||| | |||||||||||||| |||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 154 gagta 158
||||
Sbjct: 9 aagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||| |||||||| ||| |||| |||||||||||||
Sbjct: 7 cttcctccgtttcacaatgcaagtcattctagcatttcccacattcatatt 57
Score = 44.1 bits (22), Expect = 9e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 202 aatgacttatattgtgaaacgaagggagta 231
|||||||| ||||||||||||||||||||
Sbjct: 71 aatgacttgcattgtgaaacgaagggagta 100
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 4e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 61 catcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 168 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggg 227
|||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||| |||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 228 agta 231
||||
Sbjct: 127 agta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 79
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 95 tcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggaggg 154
|||||| |||| |||| ||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 155 agta 158
||||
Sbjct: 127 agta 130
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 79.8 bits (40), Expect = 2e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||| ||||||||||||| ||||||||| ||||| || ||| ||||| |||||||||||
Sbjct: 101 cctccatttcacaatgtaaatcattttagcatttttcatatttatattgatactaatgaa 42
Query: 70 tctagata 77
||||||||
Sbjct: 41 tctagata 34
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||||||||| |||||||| ||| || |||||||||||||| ||| ||||||||
Sbjct: 35 atctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaa 94
Query: 220 acgaagggagta 231
| | ||||||||
Sbjct: 95 atggagggagta 106
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
|||||||||||||| |||||||||||| | |||||||| ||| | |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 148 cggagggagta 158
||||||||||
Sbjct: 96 tggagggagta 106
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gaaattcttcctccgtttcacaatgtaagtcatt 34
||||| ||||||||||||||||||||||||||||
Sbjct: 1 gaaatacttcctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 9e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 133 acttacattgtgaaacggagggagta 158
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| || |||||||| ||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgttaat 66
Query: 67 gaatctagatag 78
|||| |||||||
Sbjct: 67 gaatgtagatag 78
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||| |||||||| ||||||||||||| ||| ||||| || ||||||||| ||||||||
Sbjct: 76 atctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaa 17
Query: 220 acgaagggagta 231
||| ||| ||||
Sbjct: 16 acggaggaagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 131 cctccgtttcataatgtaagtcattttagtatttttcatattcatatt 84
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
|||| |||||||| ||||||||| ||| | | ||||| |||||| |||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 148 cggagggagta 158
|||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||| || |||| ||||||||||||| ||| ||||||| ||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||| ||| ||| ||||||||| ||||||||||||||||
Sbjct: 98 aaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattatagtatttttcacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| |||| ||| ||||||||| ||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||| ||||| ||||||||||||| ||||||||| ||||||||||||
Sbjct: 111 cctccatttcataatgtaagtcattctagtatttttcacattcatatt 64
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 43 aaatactataatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 177 tcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
|||||||||||||| |||| ||| ||||||||| ||| ||||| | |||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagtaa 117
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagtaa 159
|||| ||||||| ||||||||| ||||| |||||||||||
Sbjct: 78 aaatactagaatgacttacattatgaaatggagggagtaa 117
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatac 62
||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatac 62
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatac 62
||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||
Sbjct: 120 cctccgtttcacaatgtaagttattctagcattttccacattcatattgatac 68
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||| | ||||||||||| ||| ||||
Sbjct: 124 cttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatattaat 65
Query: 67 gaat 70
||||
Sbjct: 64 gaat 61
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||||| |||||||| ||| | |||||||||||||| ||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 153 ggagta 158
| ||||
Sbjct: 121 gaagta 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| |||||||||||||| |||||||||| ||||||||| ||||||||||| ||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 226 ggagta 231
| ||||
Sbjct: 121 gaagta 126
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||||||||||||| ||| |||| |||| |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 79.8 bits (40), Expect = 2e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||||||||||| ||||| || | ||||||| || |||||
Sbjct: 59 atctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaa 118
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 119 acggagggagta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 81 atatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacat 140
|||||| ||||||||||||| ||||||||| ||| | | ||||| |||| | ||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 141 tgtgaaacggagggagta 158
|||||||||||||||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||| |||||||||| | || |||||||||||||||||| || |||||||
Sbjct: 125 cctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaa 66
Query: 70 tctagatagatat 82
|||||||| ||||
Sbjct: 65 tctagatatatat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||| || ||||||||||| |||||| ||||||||||| ||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| | | |||| |||||||||||||||||||||
Sbjct: 44 gaaatgctaaattgactttcattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||| |||||| ||||| |||| || ||||||||
Sbjct: 10 cctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 2e-14
Identities = 124/152 (81%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | |||||| ||| ||| |||||| | || ||||
Sbjct: 156 cttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | || ||| ||| ||||||||||| | || |||| || | | ||||||
Sbjct: 96 gaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 36 agaaagtcttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaa 122
||||||||||| | | ||| |||||||||||||||||| |||| | || ||| | || ||
Sbjct: 63 taatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaa 122
Query: 123 tgctagaataacttacattgtgaaacggagggagta 158
||||| || |||||||||||||||||||| ||||
Sbjct: 123 tgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| | |||||| |||| |||||||||| | |||| |||||||||
Sbjct: 88 tctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 148 cggaggaagta 158
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| |||||||| ||||||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaat 66
Query: 67 gaat 70
||||
Sbjct: 67 gaat 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| ||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 226 ggagta 231
| ||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||||| ||||||||| ||| | | |||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 153 ggagta 158
| ||||
Sbjct: 10 gaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||| ||||||||||||| ||| |||||||| |||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatatt 77
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | | |||||||||||| ||||||||| |||||||||| |||||
Sbjct: 73 catcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||| ||| |||||||| ||||||||| ||| ||||||| || |||||
Sbjct: 73 catcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||||| ||| | ||||| || ||||
Sbjct: 128 cttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgttaat 69
Query: 67 gaatctagatagatat 82
||||||||||||||||
Sbjct: 68 gaatctagatagatat 53
Score = 73.8 bits (37), Expect = 1e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaa 147
||||||||||||| |||||||||| | | |||||||||||| |||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 148 cggagggagtaaa 160
|||||| ||||||
Sbjct: 120 cggaggaagtaaa 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| ||||||||| | ||| |||||||| ||||||||| ||||||||
Sbjct: 59 atctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaa 118
Query: 220 acgaagggagtaa 232
||| ||| |||||
Sbjct: 119 acggaggaagtaa 131
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 10 cctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||| ||||| ||| ||||||||| ||||| ||||| ||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||| ||||||| ||||||||||| ||||||||||||||
Sbjct: 44 gaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 107 atataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| | |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 108 tataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||| | |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 99 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| |||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 185 aatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 63.9 bits (32), Expect = 9e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 107 atataaatctaggaaatgctagaataacttacattgtgaaacgg 150
|||||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||||||||||||| ||| |||| ||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||| |||||||||||||||| ||||||||| |||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacg 97
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacatt 51
||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 144 cctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 13 ccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||||||||| ||| |||| ||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 2e-14
Identities = 124/152 (81%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | || ||||||| | ||||||| | || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||| | | || |||||||||||||| |||| |||| | || || | || ||||||
Sbjct: 67 gaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||||||||||||||||||| | || ||| ||| |||||| ||| | || |||| ||
Sbjct: 153 cctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgttaataaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||||| | ||| |||||| ||||||||||| |||| | || ||| ||| ||| ||| |
Sbjct: 93 tctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaatactata 34
Query: 130 ataacttacattgtgaaacggagggagtaa 159
| |||||||||||||||||||| |||||
Sbjct: 33 aagtcttacattgtgaaacggaggaagtaa 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||| |||| |||| | ||| ||||||| ||||||| || | |||| |||||||||
Sbjct: 88 tctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaa 147
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 148 cggagggagta 158
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 77.8 bits (39), Expect = 6e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattttagcactttccacattcatatt 57
Score = 73.8 bits (37), Expect = 1e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 168 tcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggg 227
|||||| ||||||||||||||||| || ||||||||||||||| ||| ||||||| |||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 228 agtaa 232
|||||
Sbjct: 8 agtaa 4
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 63.9 bits (32), Expect = 9e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| | |||| ||||||||| |||||||||||||||| |||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 95 tcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggaggg 154
|||||| ||||||||| ||| | | || ||||| ||| ||||||||| |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 155 agtaaatc 162
||||||||
Sbjct: 8 agtaaatc 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||| |||||||||||||||||||| ||| | || |||||||||||||
Sbjct: 118 cctctgtttcacaatgtaagtcattctagcacttcccacattcatatt 71
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 77.8 bits (39), Expect = 6e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 176 atcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaaca 234
|||||||||||| |||||||||||| ||||||||| ||||||||||| ||| |||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtaaca 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgcta-aaatgacttatattgtga 218
|||||||||||||| ||||||||||||||||||||||| || | |||||| |||||||
Sbjct: 77 atctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtga 18
Query: 219 aacgaagggagtaa 232
|||| |||||||||
Sbjct: 17 aacggagggagtaa 4
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||||| ||| | |||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtaa 138
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| ||| |||||||||
Sbjct: 135 cttcctccgtttcacaatgtaagtcattctagcatttcccatattcatatt 85
Score = 65.9 bits (33), Expect = 2e-10
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaata-acttacattgtgaa 146
||||||||||||| ||||||||| ||| | ||||||| |||| ||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 147 acggagggagtaa 159
|||||||||||||
Sbjct: 16 acggagggagtaa 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattt-tagtattttccacattcatattaatactaatga 68
|||||||||||||||||||||| | || |||| ||||||||||||| || ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgttaatga 69
Query: 69 atctagatagatat 82
||||||||||||||
Sbjct: 70 atctagatagatat 83
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 77.8 bits (39), Expect = 6e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 84 tatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgt 143
|||||||||||| |||| |||| |||| ||| | | ||||||||||||||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 144 gaaacggagggagta 158
|||||||||||||||
Sbjct: 123 gaaacggagggagta 137
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||| |||| |||| |||||||||||| ||||||| ||| ||||| ||| |||||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 127 cggagggagta 137
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||||||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaataacttacattatgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||| ||||||||| ||| ||| ||| |||||||||||||
Sbjct: 132 cctccgtttcataatgtaagttattctagcattgtccacattcatat 86
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattca 53
|||||||||||||| ||||||||| ||| ||| ||| |||||||||
Sbjct: 7 cttcctccgtttcataatgtaagttattctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 77.8 bits (39), Expect = 6e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 104 tcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| | |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 177 tcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||| || ||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| ||| |||| |||| || |||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacgtttatatt 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 194 aatgctaaaatgacttatattgtgaaacg 222
||||||| |||||||||||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacg 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacgga 151
||||||||||| ||||| |||||||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacgga 97
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 77.8 bits (39), Expect = 6e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 76 tagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataact 135
||||| ||||||| ||||||||||| |||| || || || | || |||||||||| | ||
Sbjct: 87 tagatgtatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatct 28
Query: 136 tacattgtgaaacggagggagta 158
|||||||||||||||||||||||
Sbjct: 27 tacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 182 atgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||| ||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccaca 49
|||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 106 cttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 45 ggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcat 54
||||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagta 108
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 187 tgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||| |||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
|||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 50 atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 209
|||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 74 atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatctagatagatatat 84
|||||||| ||| |||| ||||||||||||| || ||||| ||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 58.0 bits (29), Expect = 6e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 76 tagatatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataact 135
||||||||| | ||||||| ||||| ||||||||| ||| | |||||||||||||| |||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Query: 136 t 136
|
Sbjct: 123 t 123
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 88 tctagattcattagcatcaatataaatctaggaaatgctagaataactt 136
||||||| ||||| ||||||||| ||| | |||||||||||||| ||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 44.1 bits (22), Expect = 9e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 27 aagtcattttagtattttccacattcatattaatactaatgaatctagat 76
|||||||| ||| |||| ||||||||||||| || ||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagat 50
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| || ||||||||||||| ||||||||| ||||||||| ||||||||||| ||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 226 ggagta 231
| ||||
Sbjct: 10 gaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 125 cctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 92 aaatgctagaatgacttacattgtgaaacggagggagta 130
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||||| || |||||| ||| | ||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 153 ggagta 158
| ||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||| ||| |||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 73.8 bits (37), Expect = 1e-12
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 ggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 186 atgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||||||| | ||||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacat 50
||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 194 aatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||| ||||| ||| ||||||||||| ||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||| || ||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 61 catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| | ||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 61 catcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||| || ||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 66 catcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattt 43
||||||||||||||||||||||||||||| ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattt 43
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| | ||||||||| ||| ||||| ||||||||||||||| ||||
Sbjct: 66 catcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagta 122
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattt 43
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 120 cttcctccgtttcacaatataagtcattttagcattt 84
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 82 tatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
||||||||||||||||||| |||| |||| ||| | || |||||||||| |||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 142 gtgaaacggagggagta 158
||||||||||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||||||| || |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||||||||| || ||| ||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgttaat 66
Query: 67 gaatctaga 75
|||||||||
Sbjct: 67 gaatctaga 75
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| |||||||| ||||||||||||||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| |||||||| ||| | ||||||||||||| ||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 150 gagggagta 158
|||||||||
Sbjct: 118 gagggagta 126
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||||||| || ||||||||| ||||||||| ||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 223 aagggagta 231
||||||||
Sbjct: 118 gagggagta 126
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||| ||||||||| ||| |||||||||||| |||||
Sbjct: 7 cttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||| ||||||| |||||||| ||||||||||||||||||||| ||| ||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| ||| |||| || ||||||||| ||| |||||||
Sbjct: 121 cctccgtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaa 62
Query: 70 tcta 73
||||
Sbjct: 61 tcta 58
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 106 aatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| | | |||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 108 tataaatctaggaaatgctagaataacttacattgtgaaacggag 152
||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 39 tataaatgtaggaaatgctagaatgacttacattgtgaaacggag 83
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtat 41
|||||||||||||||||||||||||||| ||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagtat 41
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 125 ctagaataacttacattgtgaaacggagggagta 158
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 185 aatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||| |||||||||| ||||||||| |||||||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacg 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatgtaagtcattttagtattt 43
|||||||||||||||||||||||| ||| ||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcattt 51
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 1e-12
Identities = 124/152 (81%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatac--taatg 67
|||||||||||||||||||| | |||||| ||| ||||| ||||| ||| |||||
Sbjct: 155 cctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgttaatg 96
Query: 68 aatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgcta 127
|||||| | | ||| |||||| ||||||||||| |||| | || ||| | || |||||||
Sbjct: 95 aatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaatgcta 36
Query: 128 gaataacttacattgtgaaacggagggagtaa 159
||| ||||||||||||||| ||||||||||
Sbjct: 35 gaaagtcttacattgtgaaacagagggagtaa 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| | ||||||||||| ||||||| || | |||| ||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacattgtgaaaca 14
Query: 223 aagggagtaa 232
|||||||||
Sbjct: 13 gagggagtaa 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaac 233
||||| ||||| | |||||||||| | |||| ||||||||||| ||||||||||
Sbjct: 109 atatgtatgtgagcaatgctaaaaagtcttacattgtgaaacggagggagtaac 162
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 134 cttacattgtgaaacggagggagtaa 159
||||||||||||||||||||||||||
Sbjct: 136 cttacattgtgaaacggagggagtaa 161
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||| ||||||| ||||||| || | ||||||||||||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 223 aagggagta 231
||||||||
Sbjct: 128 gagggagta 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||||| ||||||||||| |||| |||| || | || |||||||||| |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 143 tgaaacggagggagta 158
||||||||||||||||
Sbjct: 121 tgaaacggagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||| ||||||| ||||||| || | ||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 223 aagggagta 231
||||||||
Sbjct: 13 gagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||||| ||||||||||| |||| |||| || | || |||||||||| |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 143 tgaaacggagggagta 158
||||||||||||||||
Sbjct: 20 tgaaacggagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| ||||| ||| ||||||||| ||||||||||| ||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagtatttctcacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| |||||| ||||| |||||||||||| ||| |||||| ||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||| |||||| |||||||||||||||| ||||| |||||| |||||
Sbjct: 138 cctctgtttcataatgtaagtcattttaacatttttcacatttatatt 91
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcata 55
|||||||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 93 cttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 181 tatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 55 ggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| |||||||||||||||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 44.1 bits (22), Expect = 9e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattt 43
|||| |||||||||||||||||||| ||| ||||
Sbjct: 10 cctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||||
Sbjct: 81 catcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||||||| || || ||||||||| |||||||||||||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 223 aagggagtaaca 234
||||| |||||
Sbjct: 13 gagggaataaca 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcat 54
|||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 135 cttcctccgtttcacaatataagtcattttagcatttttcacattcat 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| |||||||| || | ||||||||||||| ||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 150 gaggga 155
||||||
Sbjct: 13 gaggga 8
Score = 48.1 bits (24), Expect = 6e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||||||| ||||||||| ||| |||| || || ||||| ||| |||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 70 tcta 73
||||
Sbjct: 70 tcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| ||||| ||||||||||||||| ||||
Sbjct: 99 aaatgctaaaatgacttatattgtgaaacggaggaagta 137
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||| ||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||| | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 122 atgctagaataacttacattgtgaaacggagggagta 158
|||||||| | ||||||||||||||||||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtca 32
|||||||||||||||||||||||
Sbjct: 106 cctccgtttcacaatgtaagtca 84
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||| |||||||| ||||||||| |||||| ||||| ||| ||||
Sbjct: 106 cttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatattaat 47
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 126 tagaataacttacattgtgaaacggagggagtaa 159
|||||| |||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagtaa 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcatt 34
|||||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcatt 34
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 202 aatgacttatattgtgaaacgaagggagtaac 233
||||||||| ||||||||||| ||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtaac 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 103 atcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| | |||| ||||||| |||| |||||||||||||||| ||||
Sbjct: 53 atcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatta 58
|||||||||||||||||||||||| ||| ||| |||| ||||||||||||||
Sbjct: 138 cttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatta 87
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||| ||| ||| ||||| ||||||||||| ||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||| ||| ||||||||||||||||||||||||| ||||
Sbjct: 100 ggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 54.0 bits (27), Expect = 9e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 129 aataacttacattgtgaaacggagggagtaa 159
||||||||||||||||||||||||| |||||
Sbjct: 34 aataacttacattgtgaaacggaggaagtaa 4
Score = 54.0 bits (27), Expect = 9e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||||||||||||||| ||| || |||| ||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 179 aatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaac 233
|||||||||||| ||||| || ||| ||||| ||||||||||| ||| ||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagtaac 3
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||| ||||||||||||| ||||||||||||| ||||| || ||| | |||||| ||||
Sbjct: 7 cttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaat 66
Query: 67 gaatctagatagatat 82
||||||||| ||||||
Sbjct: 67 gaatctagacagatat 82
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaaca 234
||||||||||| ||||| |||||||||||||||||||||||| |||| ||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggagggggtaaca 133
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| ||| | ||| || ||||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatattgtgaaa 16
Query: 221 cg 222
||
Sbjct: 15 cg 14
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||| |||||||||||| ||||| |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacat 140
|||| ||||||||||||||| ||| ||| ||||| | |||||||| ||| ||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 141 tgtgaaacgga 151
|||||||||||
Sbjct: 22 tgtgaaacgga 12
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
|||||||||||||||||||||| |||| |||| ||| | | ||||||||||| ||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 139 attgtgaaacggagggagta 158
||| ||||| ||||| ||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 107 atataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||| | ||||||| ||||||||| ||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttacattatgaaa 121
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||| ||||| ||||||||||||| ||| ||| ||||||||||| || ||||
Sbjct: 130 cttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgttaat 71
Query: 67 gaatctagatagatatat 84
||||||||| | ||||||
Sbjct: 70 gaatctagacatatatat 53
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
||||||||| |||| ||||| |||||||||||||||| ||| ||||||||| ||| ||||
Sbjct: 73 atctagatttattaacatcactatgaatgtgggaaatactagaatgacttacattatgaa 132
Query: 220 acgaagggagta 231
|| ||||||||
Sbjct: 133 acagagggagta 144
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||| |||||| ||||||||||||| |||||||| ||||||||||| | || |||| ||
Sbjct: 139 cctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaa 80
Query: 70 tctagatagatatat 84
|||||||| ||||||
Sbjct: 79 tctagatatatatat 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcata 55
|||||||||||||| ||||||||||||| ||| ||||| ||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcattctagcatttttcacattcata 55
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagtaaatc 162
|||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 43 aaatgctagaatgacttacattatgaaacggaggaagtaaatc 1
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 71.9 bits (36), Expect = 4e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaa 219
|||||||||||||| |||| ||||||||||||| ||||||| || | |||||| | ||||
Sbjct: 88 atctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaa 147
Query: 220 acgaagggagta 231
||| ||||||||
Sbjct: 148 acggagggagta 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||||||||||||| ||||||| || | |||||| | ||||||| ||||||||
Sbjct: 61 catctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
|||| ||||||||||||| |||| |||| ||| | || |||||||||| |||| | |
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatc 143
Query: 143 tgaaacggagggagta 158
||||||||||||||||
Sbjct: 144 tgaaacggagggagta 159
Score = 46.1 bits (23), Expect = 2e-04
Identities = 93/115 (80%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatatgtctagattca-ttagca 103
|||||||||||| || ||||||||||||||| || || |||||||||| | ||| ||
Sbjct: 119 ccacattcatatagatgttaatgaatctagatatatgtaggtgtctagattaatttaaca 60
Query: 104 tcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
|| |||| ||| | || |||||||||| |||| | | ||||||||||||||||
Sbjct: 59 tctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 4e-12
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| |||| ||| | || ||| ||| |||||||||| | || ||||
Sbjct: 7 cttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||| | | |||||||||||||||||||||| |||| || | |||| |||| |
Sbjct: 67 gaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatgtt 126
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||||||||||||||||||||||||
Sbjct: 127 agaaagtcttacattgtgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaa 122
||||||||||||| | |||||| ||| ||||||||||| |||| | || ||| | || ||
Sbjct: 100 taatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 123 tgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| |||| ||||||||||| ||||
Sbjct: 40 tgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgcta 200
||||||||||| |||| | ||||||||||| |||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgcta 36
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||| ||||||||||||| |||| || || | |||||| | |||||
Sbjct: 68 tctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatgaaa 127
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 128 cggagggagta 138
Score = 63.9 bits (32), Expect = 9e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
||||||||||||||||||||||||||| |||| ||| | || |||| ||||| ||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 139 attgtgaaacggagggagta 158
| | ||||||||||||||||
Sbjct: 119 aatatgaaacggagggagta 138
Score = 44.1 bits (22), Expect = 9e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatat 86
|||||||||||| || |||||||||||||| | ||||||||
Sbjct: 98 ccacattcatatagatgctaatgaatctagacatatatatat 57
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 67.9 bits (34), Expect = 6e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacatt 51
||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 111 cctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| |||| |||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 185 aatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||| |||||||| ||||||||| ||||||||||| ||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 54.0 bits (27), Expect = 9e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattc 52
|||||||||||||||| |||||||| ||| |||||||| ||||
Sbjct: 10 cctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 184 gaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||||||||||| ||||||||||||| ||||||| || | |||||| | |||||
Sbjct: 88 tctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 147
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 148 cggaggaagta 158
Score = 63.9 bits (32), Expect = 9e-10
Identities = 122/152 (80%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| | | |||| | || ||| ||| |||||||||||| || |||||
Sbjct: 156 cttcctccgtttcatattataagactttctagcattgcccacattcatatagatgctaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||||| | |||||| ||| ||| ||||||| |||| |||| | | | || ||||||
Sbjct: 96 gaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatgct 37
Query: 127 agaataacttacattgtgaaacggagggagta 158
|||| |||| | | ||||||||||||||||
Sbjct: 36 agaaagtcttataatatgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 9e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaa 130
||||||||||||||||||||||||||| |||| ||| | || ||||||||||
Sbjct: 79 atatatatgtctagattcattagcatctatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 96 cattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggaggga 155
||||| ||| ||||||||| | ||||||||||||| ||||||||||||||||||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 156 gta 158
|||
Sbjct: 7 gta 5
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaat 60
|||||||||||||||||||||||||||| ||| |||| |||||| ||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaat 60
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 169 cattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaaggga 228
||||| ||| ||||| |||||| ||||||||| ||||||||| ||||||||||| ||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 229 gta 231
|||
Sbjct: 7 gta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||||||| |||||||||||| |||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattc 52
|||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 123 tgctagaataacttacattgtgaaacggagggagta 158
||||||||| ||||||||||||||||||||| ||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 184 gaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||| || ||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 67.9 bits (34), Expect = 6e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 93 attcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||||| |||||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 153 ggagta 158
| ||||
Sbjct: 126 gaagta 131
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttc 45
||||||||||||||||||||||||||||| ||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattttagcattttc 45
Score = 63.9 bits (32), Expect = 9e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||||| ||| || ||||| || ||||
Sbjct: 129 cttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgttaat 70
Query: 67 gaat 70
||||
Sbjct: 69 gaat 66
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 193 aaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||| ||||||||||| ||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||| ||| ||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| ||||||||| || ||| |||||||| ||||||||| ||||||||||| ||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 226 ggagta 231
| ||||
Sbjct: 126 gaagta 131
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 67.9 bits (34), Expect = 6e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatatgtctagattcattagcat 104
|||||||||||| || ||||||||||||||| |||||| || |||||||||||| |||
Sbjct: 21 ccacattcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacat 80
Query: 105 caatataaatctaggaaatgctagaa 130
| |||| ||| | || ||||||||||
Sbjct: 81 ctatatgaatgtgggcaatgctagaa 106
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgcta 200
|||||||||||| |||| ||||||||||||| |||||||
Sbjct: 65 ctagattcattaacatctatatgaatgtgggcaatgcta 103
Score = 52.0 bits (26), Expect = 4e-06
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatatgtctagattcattagcat 104
|||||||||||| || |||||||||||| | |||||||| ||||||||||||| |||
Sbjct: 94 ccacattcatatagatgttaatgaatctaggcacatatatatatctagattcattaacat 35
Query: 105 caatataaatctaggaaatgctagaa 130
|||| ||| | || ||||||||||
Sbjct: 34 atatatgaatgtgggcaatgctagaa 9
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgcta 200
|||||||||||||| ||| ||||||||||||| |||||||
Sbjct: 52 atctagattcattaacatatatatgaatgtgggcaatgcta 12
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatg 197
||||| |||||||||||||||||||||||||||||||
Sbjct: 41 tctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatg 197
|||||||| ||||||||||||||||||||||||||||
Sbjct: 76 tctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatg 124
|||||||||||||| ||||||||||||||||| ||| | |||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatg 124
||||||||||||||||| |||||||||||||| ||| | |||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 40 attttccacattcatattaatactaatgaatctagatagatatatatgtctagattcatt 99
|||| ||||||||||||| || ||||| ||||||| | |||||||||||||| || |||
Sbjct: 111 atttcccacattcatattgatgctaataaatctag--acatatatatgtctagttttatt 54
Query: 100 agcat 104
|||||
Sbjct: 53 agcat 49
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 88 ggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 186 atgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||| ||||||||| ||| ||||||| ||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 180 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| |||||| |||||| || ||||||||||||| ||||||||||| ||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacat 50
||||||||||| ||||||||||||| ||| |||| ||||||
Sbjct: 123 cctccgtttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| |||||| ||||||||| ||||||||||||||| ||||| ||| ||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 58.0 bits (29), Expect = 6e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 102 catcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| | ||||||||||||| ||||| ||||| ||||||||| ||||
Sbjct: 37 catcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagta 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 201 aaatgacttatattgtgaaacgaagggagta 231
|||||||||||||||||||||| || |||||
Sbjct: 35 aaatgacttatattgtgaaacggagagagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatatt 57
|||||||||||| ||||| ||||||||| ||| |||| |||||| |||||
Sbjct: 91 cttcctccgttttacaatataagtcattctagcatttctcacatttatatt 41
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||||||| ||||||| || | |||||| | |||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 223 aagggagta 231
||||||||
Sbjct: 152 gagggagta 160
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||||||| ||||||| || | |||||| | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 223 aagggagta 231
||| ||||
Sbjct: 13 gaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||| | | |||| | || ||| ||| |||||||||||| || ||||
Sbjct: 7 cttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttaat 66
Query: 67 gaatctagatagatatatatgtcta--gattcattagcatcaatataaatctaggaaatg 124
||||||| ||| |||| | ||| || ||||||||| |||| |||| ||| | || ||||
Sbjct: 67 gaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaatg 126
Query: 125 ctagaataacttacattgtgaaacggagggagta 158
|||||| |||| | | ||||||||||||||||
Sbjct: 127 ctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 63 taatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaa 122
||||||||||||||| ||||| |||||||||||||||| || | |||| ||| | | |||
Sbjct: 70 taatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaa 11
Query: 123 tgctagaat 131
|||||||||
Sbjct: 10 tgctagaat 2
Score = 58.0 bits (29), Expect = 6e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 31 cattttagtattttccacattcatattaatactaatgaatctagatagatatatatgtct 90
|||| ||| ||||||||||||||||| | ||||||||||||| | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 91 agattcattagcatcaatataaatctaggaaatgctagaat 131
|||||||||| || | |||| ||| | ||||||| ||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaat 101
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatg 197
|||||||||||||| || | ||||||||||||||||||
Sbjct: 57 atctagattcattaacacctatatgaatgtgggaaatg 94
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatg 205
||||||||||||| || | |||||||||||| |||||||| ||||
Sbjct: 45 tctagattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacat 50
||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 100 agcatcaatataaatctaggaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||||| | | |||||||||||| ||||| ||| ||||| ||||||||||
Sbjct: 81 agcatcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 173 agcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||| ||| ||| |||||||| ||||||||||||| ||||| | ||||||||
Sbjct: 81 agcatcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||| ||||||| ||||||||| ||||||||||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| |||| ||||||| | |||||||| | ||||||||||||||||
Sbjct: 86 tagattcattaacatctttatgtatgtgggtagtgctaaaaagtcttatattgtgaaacg 145
Query: 223 aagggagta 231
||||||||
Sbjct: 146 gagggagta 154
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| | ||||||||||| || |||| || | |||| |||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaag 29
|||||||||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaag 29
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||||||||||| ||||||| || | |||| ||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 223 aagggagta 231
||||||||
Sbjct: 132 gagggagta 140
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 90 tagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaacg 149
||||||||||| |||| |||| ||| | || |||||||||| |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 150 gagggagta 158
|||||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgcta 200
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 48 tctagattcattgacatcaatatgaatgtgggaaatgcta 87
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatg 197
|||||||||||| |||||||||||||||||||||||
Sbjct: 41 tctagattcattgacatcaatatgaatgtgggaaatg 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctag 128
|||||||||||||| ||||||||| ||| | |||||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 63.9 bits (32), Expect = 9e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
|||||||||||||||||||||| |||| | || ||| | | |||||||||| |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 139 attgtgaaacggagggagta 158
||||||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | || ||| ||| ||||||||||| | || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgttaat 66
Query: 67 gaatctagatagatatat 84
||||||||| | ||||||
Sbjct: 67 gaatctagacatatatat 84
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| | |||||||||| ||||||| || | |||| |||||||||
Sbjct: 75 tctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 63.9 bits (32), Expect = 9e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||||||||||||||||||| ||| ||||| ||||| |||||| || ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgttaat 65
Query: 67 gaat 70
||||
Sbjct: 66 gaat 69
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggaggg 154
|||||||||||| ||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| |||||||||| ||||| |||||||| ||||||||| ||||||||||| ||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 226 ggagta 231
| ||||
Sbjct: 10 gaagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcat 54
||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcatttt-cacattcat 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 193 aaatgctaaaatgacttatattgtgaaacgaaggg 227
|||||||| ||||||||| ||||||||||| ||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 185 aatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||| ||||||||||||||||||||||| ||||||| | ||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacggatggagta 91
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattt 43
|||||||||||||||||||||||||||| ||| ||||
Sbjct: 7 cttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 192 gaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||||||||| ||||||||||| ||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 63.9 bits (32), Expect = 9e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 83 atatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattg 142
||||||||||||| |||| |||| |||| ||| | || |||||||||| |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 143 tgaaacggagggagta 158
||||||||||| ||||
Sbjct: 119 tgaaacggaggaagta 134
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||| |||| |||| ||||||||||||| ||||||| || | |||| |||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 124 cggaggaagta 134
Score = 52.0 bits (26), Expect = 4e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||||||||||||||| | || ||| ||| ||||||||||||
Sbjct: 132 cttcctccgtttcacaatgtaagactttctagcattgcccacattcatat 83
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| |||| ||||||||||||| |||||||||| | ||| ||| |||||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 132 cggagggagta 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||||||||||||| ||||||| || | |||| ||| ||||||| ||||||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| |||||||| ||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 84 tatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgt 143
||||||||||||||||| |||| |||||||| | | |||||||||| |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 144 gaaacggagggagta 158
||||||||| |||||
Sbjct: 123 gaaacggagagagta 137
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| |||||||| |||| ||||||||||||| ||||||| || | |||| ||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
|||||| |||||||| |||| |||| ||| | || |||||||||| |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 146 aacggagggagta 158
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||||||||||||| ||||||| || | |||| ||| ||||||| ||||||||
Sbjct: 86 catctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| |||||||| ||||||||||||||||
Sbjct: 105 aatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 193 aaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||| ||||||||||||||||||||||||||||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| | ||||||||||||||||||||||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagta 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 14 cgtttcacaatgtaagtcattttagtattttccacat 50
||||||||||| ||||||||| ||||||||| |||||
Sbjct: 14 cgtttcacaatataagtcattctagtatttttcacat 50
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||| ||||||| ||||| ||||||||||| ||||||||
Sbjct: 43 aaatactagaatgacttatattgtgaaacgaagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtatttt 44
||||||||||||||||||| ||||| ||| |||||
Sbjct: 99 cctccgtttcacaatgtaaatcattctagcatttt 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 193 aaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||||||| ||||| ||| ||||||||||| ||||||||
Sbjct: 66 aaatgctagaatgatttacattgtgaaacggagggagta 104
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||| |||| |||| |||||||||||| ||||||| || | |||| |||||||||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 130 cggagggagta 140
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 86 tgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtga 145
|||||||||| |||| |||| |||| ||| | | |||||||||| ||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 146 aacggagggagta 158
|||||||||||||
Sbjct: 128 aacggagggagta 140
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||||||| | |||||| ||| |||| ||||||||
Sbjct: 10 cctccgtttcacaatgtaagactttttagcattatccatattcatat 56
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||||||||| | || ||| ||| |||||||||||||
Sbjct: 135 cctccgtttcacaatgtaagactttctagcattgtccacattcatat 89
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| |||||||| ||| |||||||||| | |||| ||||||||||| ||||||||
Sbjct: 61 catctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 134 cttacattgtgaaacggagggagta 158
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||| ||||||| ||||||| ||||| ||| ||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 221 cgaagggagta 231
| ||||||||
Sbjct: 122 cagagggagta 132
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 87 gtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaa 146
|||||||||||||| |||| |||| || | || ||||||||||| | ||||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 147 acggagggagta 158
|| |||||||||
Sbjct: 121 acagagggagta 132
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcatt 34
|||||||||||||| |||||||||||||
Sbjct: 7 cttcctccgtttcataatgtaagtcatt 34
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 124 gctagaataacttacattgtgaaacggagggagta 158
|||||||| ||||||||||||||||||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 118 ggaaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||||| |||||||||||| |||||||| ||||
Sbjct: 45 ggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacat 50
||||||||||| |||||||||||||||| ||| |||| ||||||
Sbjct: 7 cttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 186 atgtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||||||||| ||||||||| |||||| |||| ||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcatt 34
|||||||||||||||||||||||||
Sbjct: 89 cctccgtttcacaatgtaagtcatt 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 197 gctaaaatgacttatattgtgaaacgaagggagta 231
|||| ||||||||| ||||||||||| ||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 61.9 bits (31), Expect = 4e-09
Identities = 75/89 (84%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 40 attttccacattcatattaatactaatgaatctagatagatatatatgtctagattcatt 99
|||| |||| |||||||| ||| ||||||||||||||||||||| ||||||||||||
Sbjct: 6 atttcccacgttcatattgatattaatgaatctagatagatata---atctagattcatt 62
Query: 100 agcatcaatataaatctaggaaatgctag 128
| |||||||| || | |||||||||||
Sbjct: 63 aatatcaatatgaacgtgggaaatgctag 91
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 159 aatctagattcattagcatcaatatgaatgtgggaaatgcta 200
||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 49 aatctagattcattaatatcaatatgaacgtgggaaatgcta 90
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgcta 200
|||||||||||||| ||||||||||| |||||||||||||
Sbjct: 42 atctagattcattaatatcaatatgaacgtgggaaatgcta 2
Score = 54.0 bits (27), Expect = 9e-07
Identities = 74/89 (83%), Gaps = 3/89 (3%)
Strand = Plus / Minus
Query: 40 attttccacattcatattaatactaatgaatctagatagatatatatgtctagattcatt 99
|||| |||| |||||||| ||| |||||||||||||| ||||| | ||||||||||||
Sbjct: 86 atttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcatt 30
Query: 100 agcatcaatataaatctaggaaatgctag 128
| |||||||| || | |||||||||||
Sbjct: 29 aatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| ||||||||||||| ||||||| || | |||||| | |||||
Sbjct: 62 tctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttgaaa 121
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 122 cggagggagta 132
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
|||||||||||||||||||||| ||| |||| ||| | || |||||||||| ||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 139 attgtgaaacggagggagta 158
| | ||||||||||||||||
Sbjct: 113 aatttgaaacggagggagta 132
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 61.9 bits (31), Expect = 4e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| ||||||||||||| ||||||| || | |||||| | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 116 cggaggaagta 126
Score = 44.1 bits (22), Expect = 9e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 85 atgtctagattcattagcatcaatataaatctaggaaatgctagaa 130
|||||||||||||||| |||| |||| ||| | || ||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 61.9 bits (31), Expect = 4e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatatgtctagattcatt 99
|||||||||||| || ||||||||||||| | |||||||||||||||||||||
Sbjct: 21 ccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatt 75
Score = 54.0 bits (27), Expect = 9e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatat 110
|||||||||||| | |||||| ||||||||||||||| |||| ||||
Sbjct: 75 aatgaatctagacatatatatgtgtctagattcattaacatctatat 29
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtggg 192
||||||||||||| |||| |||||||||||||
Sbjct: 51 tctagattcattaacatctatatgaatgtggg 20
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||| ||||||||| ||| ||||||||||||| ||||||| || | |||| |||||||||
Sbjct: 56 tctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 115
Query: 221 cg 222
||
Sbjct: 116 cg 117
Score = 58.0 bits (29), Expect = 6e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||| |||||||||||||||||| | || ||| ||| |||||||||||| ||||||||
Sbjct: 124 cttcatccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaat 65
Query: 67 gaatctaga 75
|||| ||||
Sbjct: 64 gaatttaga 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 84 tatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgt 143
|||||||| ||||||||| ||| |||| ||| | || |||||||||| ||||||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 144 gaaacgga 151
||||||||
Sbjct: 112 gaaacgga 119
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatatgtctagattcattagcat 104
|||||||||||| || ||||||||||||| | | ||||||||||||||||||| ||||
Sbjct: 24 ccacattcatatctatgctaatgaatctaggcacacatatatgtctagattcatttgcat 83
Query: 105 caatat 110
| ||||
Sbjct: 84 ctatat 89
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgcta 200
|||||||||||||||| ||||||||||||| |||||||
Sbjct: 53 ctagattcattagcatagatatgaatgtgggcaatgcta 15
Score = 52.0 bits (26), Expect = 4e-06
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 45 ccacattcatattaatactaatgaatctagatagatatatatgtctagattcattagcat 104
|||||||||||| || | |||||||||||| | |||| | || ||||||||||||||||
Sbjct: 97 ccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcat 38
Query: 105 caatataaatctaggaaatgctagaa 130
|||| ||| | || ||||||||||
Sbjct: 37 agatatgaatgtgggcaatgctagaa 12
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatg 197
|||||||||||| ||||| ||||||||||||| ||||
Sbjct: 67 tctagattcatttgcatctatatgaatgtgggcaatg 103
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||||||||| ||||||||||||| ||| ||| || ||||||||||
Sbjct: 134 cttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 81 atatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacat 140
||||| |||||||||||||| ||| |||| || | || ||| |||||| ||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 141 tgtgaaacggagggagta 158
| ||||||||||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
||||||||||| ||||||||||||| || |||| ||| || ||||| ||| |||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatattaatgaa 69
Query: 70 tctaga 75
||||||
Sbjct: 70 tctaga 75
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| ||| ||||| || |||| ||| || ||||||||| ||| |||||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 162 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
|||||||||||| |||| ||||| ||||||| ||||||| || | |||| ||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 222 gaagggagta 231
| ||||||||
Sbjct: 138 ggagggagta 147
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 89 ctagattcattagcatcaatataaatctaggaaatgctagaataacttacattgtgaaac 148
|||||||||||| |||| |||| || | || |||||||||| |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 149 ggagggagta 158
||||||||||
Sbjct: 138 ggagggagta 147
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| | |||||||| | ||||||| || | |||| |||||||||
Sbjct: 75 tctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtgaaa 16
Query: 221 cgaagggagta 231
|| ||| ||||
Sbjct: 15 cggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaag 29
|||||||||||||||||||||||
Sbjct: 7 cttcctccgtttcacaatgtaag 29
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
|||||||||| |||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 175 catcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaagggagtaa 232
|||| ||||||||||| |||||| || ||||||||| ||| ||||||| |||||||||
Sbjct: 61 catccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagtaa 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 82 tatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttacatt 141
|||||||||||||||| || |||| ||| ||| | | ||||| |||||| |||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 142 gtgaaacggagggagtaa 159
| |||||||||||||||
Sbjct: 122 ataaaacggagggagtaa 139
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
|||||||||| || |||| ||| |||||||| ||||| || ||||||||| ||| | |||
Sbjct: 68 tctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaa 127
Query: 221 cgaagggagtaaca 234
|| |||||||||||
Sbjct: 128 cggagggagtaaca 141
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagtaa 159
|||||| |||||| ||||||||| |||||||||||||||||
Sbjct: 44 gaaatgttagaatgacttacattatgaaacggagggagtaa 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
||||||||||| ||||||||||||| || |||| |||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattc 52
||||||||| | ||||||||||||| || |||||||||||||
Sbjct: 133 cctccgttttataatgtaagtcattctaacattttccacattc 91
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 160 atctagattcattagcatcaatatgaatgtgggaaatgcta 200
|||||||||||||| |||| ||||||||||||| |||||||
Sbjct: 48 atctagattcattaacatccatatgaatgtgggcaatgcta 8
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatg 197
||||||||||||| |||| ||||||||||||| ||||
Sbjct: 66 tctagattcattaacatccatatgaatgtgggcaatg 102
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 6e-08
Identities = 122/153 (79%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
|||||||||||| |||||||||| | ||||| |||| | |||||||| | || ||||
Sbjct: 7 cttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgttaat 66
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
|||| |||| | || || ||| ||||||||||| |||| |||| || | | ||||||
Sbjct: 67 gaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatgct 126
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
|||| |||||||||||||||||||| |||||
Sbjct: 127 agaaagtcttacattgtgaaacggaggaagtaa 159
Score = 52.0 bits (26), Expect = 4e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
||||||||||| |||| ||||| ||||| | ||||||| || | |||| |||||||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 223 aagggagtaa 232
||| |||||
Sbjct: 150 gaggaagtaa 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 121/153 (79%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaat 66
||||||||||||||||||||||| | || ||| ||| ||||| ||||| || ||||
Sbjct: 156 cttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgttaat 97
Query: 67 gaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgct 126
||||||| | | || ||||||||| |||||||| |||| | || ||| |||| ||| |
Sbjct: 96 gaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaatatt 37
Query: 127 agaataacttacattgtgaaacggagggagtaa 159
| || |||||||||| ||||||||| |||||
Sbjct: 36 aaaaagtcttacattgtaaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 6e-08
Identities = 125/157 (79%)
Strand = Plus / Plus
Query: 2 aaattcttcctccgtttcacaatgtaagtcattttagtattttccacattcatattaata 61
|||| ||||||| |||||| |||||||| | || ||| || |||||||||||| ||
Sbjct: 2 aaatacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatg 61
Query: 62 ctaatgaatctagatagatatatatgtctagattcattagcatcaatataaatctaggaa 121
||||||||||||| | | |||||||| |||||||||| ||| |||| ||| | || |
Sbjct: 62 ttaatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggca 121
Query: 122 atgctagaataacttacattgtgaaacggagggagta 158
|||||| || |||||||| |||||| |||||||||
Sbjct: 122 atgctaaaaagtcttacattatgaaaccgagggagta 158
Score = 58.0 bits (29), Expect = 6e-08
Identities = 119/149 (79%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||| |||||| |||||||| | |||||| ||| |||||||||||| ||| ||||||
Sbjct: 153 cctcggtttcataatgtaagactttttagcattgcccacattcatatagatatcaatgaa 94
Query: 70 tctagatagatatatatgtctagattcattagcatcaatataaatctaggaaatgctaga 129
|||| | | |||| | ||||||||||||||| ||| |||| ||| | || || ||||||
Sbjct: 93 tctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaaggctaga 34
Query: 130 ataacttacattgtgaaacggagggagta 158
| |||||||| |||||| |||| ||||
Sbjct: 33 aagtcttacattatgaaaccgaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacg 222
|||||||||| ||| ||||||||||||| |||||||||| | |||| ||| ||||||
Sbjct: 90 tagattcattgatatctatatgaatgtgggcaatgctaaaaagtcttacattatgaaacc 149
Query: 223 aagggagta 231
||||||||
Sbjct: 150 gagggagta 158
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 7 cttcctccgtttcacaatgtaagtcattttag 38
||||||||||||||||||||||| ||||||||
Sbjct: 135 cttcctccgtttcacaatgtaagacattttag 104
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| |||| ||||| || || | |||||||||||| |||| ||||||||||| ||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 226 ggagta 231
| ||||
Sbjct: 132 gaagta 137
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||| ||| |||||||||||||||||||| ||||
Sbjct: 100 aatgctaaaatgtcttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 79 atatatatgtctagattcattagcatcaatataaatctaggaaatgctagaataacttac 138
||||| |||||||||||||||| |||| |||| ||| | | |||||||||| |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 139 attgtgaaacggagggagta 158
||| |||||| |||||||||
Sbjct: 113 attatgaaacagagggagta 132
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| |||| |||||||||||| ||||||| || | |||| ||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 221 cgaagggagta 231
| ||||||||
Sbjct: 122 cagagggagta 132
Score = 44.1 bits (22), Expect = 9e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttagtattttccacattcatat 56
|||||||| ||||| |||||||| | || ||| ||| |||||||||||||
Sbjct: 7 cttcctccttttcataatgtaagactttctagcattgtccacattcatat 56
Score = 44.1 bits (22), Expect = 9e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccacattcatattaatactaatgaa 69
|||| |||||| |||||||| | || ||| ||| ||||||||||||| || |||||||
Sbjct: 127 cctctgtttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaa 68
Query: 70 tctaga 75
||||||
Sbjct: 67 tctaga 62
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 188 gtgggaaatgctaaaatgacttatattgtgaaacgaagggagta 231
|||| |||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 48 gtggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 119 gaaatgctagaataacttacattgtgaaacggagggagta 158
||||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 192 gaaatgctaaaatgacttatattgtgaaacgaagggagta 231
||||||||| ||||||||| ||| ||||||||||||||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
Score = 54.0 bits (27), Expect = 9e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 120 aaatgctagaataacttacattgtgaaacggagggagta 158
|||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 43 aaatgctagaatgacttatattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 cctccgtttcacaatgtaagtcattttagtattttccac 48
||||||||||| ||| ||||||||| ||| |||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattttccac 48
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcattttag 38
||||||||||||||||||||||| ||||||||
Sbjct: 7 cttcctccgtttcacaatgtaagacattttag 38
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 166 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgaag 225
|||||||| |||| ||||| || || | |||||||||||| |||| ||||||||||| ||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 226 ggagta 231
| ||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 9e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 121 aatgctagaataacttacattgtgaaacggagggagta 158
||||||| ||| |||||||||||||||||||| ||||
Sbjct: 42 aatgctaaaatgtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa Japonica
Group
Length = 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 109 ataaatctaggaaatgctagaataacttacattgtgaaacggag 152
|||||| ||| |||||||||||| ||||| ||||||||||||||
Sbjct: 40 ataaatatagaaaatgctagaatgacttatattgtgaaacggag 83
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 193 aaatgctaaaatgacttatattgtgaaacg 222
|||||||| |||||||||||||||||||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacg 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 122 atgctagaataacttacattgtgaaacggagggagta 158
|||||||||| ||||||| ||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 cttcctccgtttcacaatgtaagtcatt 34
|||||||||||||||| |||||||||||
Sbjct: 7 cttcctccgtttcacagtgtaagtcatt 34
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 ctccgtttcacaatgtaagtcattttagtattttc 45
|||||||||||||| ||||||||| ||| ||||||
Sbjct: 83 ctccgtttcacaatataagtcattctagcattttc 49
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 9e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||| |||| ||||||||||||| ||||||| || | |||||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 122
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| | | ||||||||||||| ||||||| || | |||||| | |||||
Sbjct: 75 tctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 54.0 bits (27), Expect = 9e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 163 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaac 221
||||||||||| |||| ||||||||||||| ||||||| || | |||||| | ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 122
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 54.0 bits (27), Expect = 9e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 161 tctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttatattgtgaaa 220
||||||||||||| | | ||||||||||||| ||||||| || | |||||| | |||||
Sbjct: 58 tctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 117
Query: 221 cgaagggagta 231
|| ||||||||
Sbjct: 118 cggagggagta 128
