miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40141_ath-MIR823:mirbase
Length = 191
Score = 379 bits (191), Expect = e-106
Identities = 191/191 (100%)
Strand = Plus / Plus
Query: 1 aatttcagagatactaatccaagagatggcggatacgttttacaatcacgaatcttgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatttcagagatactaatccaagagatggcggatacgttttacaatcacgaatcttgtat 60
Query: 61 gatcactaaccattggaacaataagagtatataatgagtatatcaccatttagttctagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcactaaccattggaacaataagagtatataatgagtatatcaccatttagttctagt 120
Query: 121 gggtggtgatcatataagattggtaatggtaacagtgaaacatatcccccatctattggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggtggtgatcatataagattggtaatggtaacagtgaaacatatcccccatctattggg 180
Query: 181 attaattagtc 191
|||||||||||
Sbjct: 181 attaattagtc 191
>39906_aly-MIR823:mirbase
Length = 325
Score = 129 bits (65), Expect = 8e-31
Identities = 86/93 (92%)
Strand = Plus / Plus
Query: 1 aatttcagagatactaatccaagagatggcggatacgttttacaatcacgaatcttgtat 60
|||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 25 aatttcagggatgctaatccaatagatggcggatacgttttccaatcacgaatcttgtat 84
Query: 61 gatcactaaccattggaacaataagagtatata 93
|||||||||||||||||| | |||||||||||
Sbjct: 85 gatcactaaccattggaagtaaaagagtatata 117
Score = 79.8 bits (40), Expect = 7e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 147 tggtaacagtgaaacatatcccccatctattgggattaattagt 190
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 243 tggtaacagtgaaacatatcccccatctatcgggattaattagt 286