miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 143/155 (92%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||| ||||||| ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| ||||| |||||||||||||| ||||
Sbjct: 38 ttagaatgacttaca-ttgtgaaacggagggagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| ||||| | ||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | |||||||||||| ||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 143/155 (92%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| ||||| |||||||||||||||||||
Sbjct: 125 ttagaatgacttaca-ttgtgaaacggaggaagta 158
Score = 143 bits (72), Expect = 9e-34
Identities = 136/156 (87%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||| ||||| |||||| |||| | ||||||||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||| |||| | |||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| |||||||||||||| ||||
Sbjct: 39 gctagaatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 141/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| || |||||||||||| ||||||||||||||| ||||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| |||||||||||||| |||||||||||||| |||||| |||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 127 bits (64), Expect = 6e-29
Identities = 134/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||||||| | |||| |||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| | |||||| | |||||||||||||| ||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaat 123
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||| | ||||| |||||||| ||||
Sbjct: 124 gctagaatgacttata-ttgtggaacggagggagta 158
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 141/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| |||||||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ttagaatgacttaca-ttgtgaaacggagggagta 158
Score = 135 bits (68), Expect = 2e-31
Identities = 135/156 (86%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||| ||||| | |||||||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| | |||||| | | ||||||||||| ||||||||||||||| |||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||| | |||||||||||||||||||
Sbjct: 39 gctagaatgacttata-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 144/159 (90%), Gaps = 1/159 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||||| | ||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatatg 171
|||||||| ||||| |||||||||||||| ||||||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagtatatg 162
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||| |||| | ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | |||||||||||||||||||||| |||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| |||||| | ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 167 bits (84), Expect = 6e-41
Identities = 139/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||||||| | |||||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| | |||||| | |||||||||||||| |||||||||||||||| ||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaat 123
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||| ||||| |||||||||||||| ||||
Sbjct: 124 gttagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 142/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||||
Sbjct: 161 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 102
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||
Sbjct: 101 ttaatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaa 42
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 41 atgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | | |||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||||||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 176 bits (89), Expect = 7e-44
Identities = 141/156 (90%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||||||| | |||| |||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtt 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
|||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 99 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| | |||||| ||||| |||||||||||||| ||||
Sbjct: 39 gcttgaatgacttaca-ttgtgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 134/156 (85%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||| ||||||| | |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| | |||||| | | |||||| |||||||||||||| ||||| |||||
Sbjct: 64 aatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaat 121
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| |||||||||||||| ||||
Sbjct: 122 gctagaatgacttaca-ttgtgaaacggagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 176 bits (89), Expect = 7e-44
Identities = 141/156 (90%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||||||| | |||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtt 61
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
|||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 62 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 121
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| | |||||| ||||| |||||||||||||| ||||
Sbjct: 122 gcttgaatgacttaca-ttgtgaaacggagggagta 156
Score = 121 bits (61), Expect = 3e-27
Identities = 134/156 (85%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||| ||||||| | |||||||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| | |||||| | | |||||| |||||||||||||| ||||| |||||
Sbjct: 97 aatgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| |||||||||||||| ||||
Sbjct: 39 gctagaatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 140/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| | ||||||| ||||| |||||||||||| | ||||||||||||| ||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| | ||||| ||||| |||||||||||||||||||
Sbjct: 39 gcaaaaatgacttaca-ttgtgaaacggaggaagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| | |||||| | |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | |||||||||||| ||||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||| ||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttgtgatacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 140/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||||||||| ||| |||||||| | |||||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| || ||||| ||||| |||||||||||||| ||||
Sbjct: 39 gctataatgacttaca-ttgtgaaacggagggagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 138/158 (87%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||| ||||| ||| ||||||| | ||||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatg 61
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||||||| | |||||| | | ||||||||||||||| ||||||||||||||||
Sbjct: 62 ttaatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaa 121
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| || ||||| ||| | |||||||||||||||||||
Sbjct: 122 atgctaaaatgacttata-ttgtgaaacggaggaagta 158
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||| ||||||||| | |||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|||||| ||| || |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 9e-28
Identities = 135/158 (85%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||| ||||| |||||||||||| | |||||||||||||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||| | |||||| | || ||| ||||| || ||||||||||||| |||
Sbjct: 100 taatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagtat 168
|| || ||||| ||||| |||||||||||||| |||||
Sbjct: 40 tgctataatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 170 bits (86), Expect = 4e-42
Identities = 142/158 (89%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||| ||||| ||||||||||||| ||| | ||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
||||||||| ||||| |||||||||||||| |||||||
Sbjct: 124 ttagaatgacttaca-ttgtgaaacggagggagtatat 160
Score = 123 bits (62), Expect = 9e-28
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| ||||| | |||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|| |||||||| | |||||| | | |||||||||||| ||||||||||||||||||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | ||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 133 ttagaatgatttacatt 149
| |||||| |||||||
Sbjct: 125 gtggaatgacttacatt 141
Score = 133 bits (67), Expect = 9e-31
Identities = 137/159 (86%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||| ||| ||||| ||| ||||| |||| | ||||| | ||||||||||||||
Sbjct: 161 tactactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatg 102
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
|||| |||||||| | |||||| | | |||||||||||||| |||||||||||||||||
Sbjct: 101 gtaatgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaa 42
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagtat 168
||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 41 atgctagaatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 165 bits (83), Expect = 3e-40
Identities = 139/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 124 ctagaatgacttaca-ttgtgaaacggagggagta 157
Score = 157 bits (79), Expect = 6e-38
Identities = 138/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | | || ||| || |||||||||||||||||||||||||||||||||||
Sbjct: 97 atgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| |||||||||||| | ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||| |||||| | | ||||||||||||||| ||||||||||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| ||| | |||||||||||||||||||
Sbjct: 38 ttagaatgacttata-ttgtgaaacggaggaagta 5
Score = 163 bits (82), Expect = 1e-39
Identities = 140/158 (88%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||||||||| |||||| | |||| | |||||||||| |||
Sbjct: 2 tactacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatg 61
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||||||||| |||||||| | |||||||||||| |||||||||||||||||||
Sbjct: 62 ttaatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaa 121
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| |||||||| ||| | |||||||||||||| ||||
Sbjct: 122 atgctagaatgacttata-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| || ||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 38 atagaatgacttaca-ttgtgaaacggagggagta 5
Score = 127 bits (64), Expect = 6e-29
Identities = 134/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| ||||| | ||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | ||||||||||||| ||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggaggaagtat 159
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 165 bits (83), Expect = 3e-40
Identities = 101/107 (94%)
Strand = Plus / Plus
Query: 35 aagttattctagcatttttcgcattcatattgatgttaataaatctagatagatatatat 94
|||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 95 gtttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
|| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
Score = 117 bits (59), Expect = 5e-26
Identities = 95/107 (88%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatattgatgttaataaatctagatagatatatat 94
|||| |||||||||||| | ||||||||||||||||||| |||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 95 gtttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
| |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatga 4
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 138/156 (88%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||| ||| ||||||||| ||||| |||||| ||||| || |||||||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| |||||||||||| ||||| |||||| | | |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||| |||||||||||||| |||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagtat 159
Score = 135 bits (68), Expect = 2e-31
Identities = 129/148 (87%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | |||||||||||||||||||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacgga 160
|||||||| ||||| ||||||||||||
Sbjct: 38 gtagaatgacttaca-ttgtgaaacgga 12
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||| || |||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| |||| | ||||| | | ||||||||||||||||||||||||| | |||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 143 bits (72), Expect = 9e-34
Identities = 136/156 (87%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||||||||| |||| || ||||||||||||||||||||||| || | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||| |||||||||||||| |||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | ||||||||||||||| |||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||| | |||||||||||||||||||
Sbjct: 38 ctacaatgacttata-ttgtgaaacggaggaagta 5
Score = 147 bits (74), Expect = 6e-35
Identities = 138/158 (87%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||||||||| ||| |||||||| | |||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 132 gttagaatgatttacatttgtgaaacggaggaagtata 169
| ||||||| ||| | |||||||||||||| ||||||
Sbjct: 124 gctagaatggcttata-ttgtgaaacggagggagtata 160
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 139/158 (87%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||| | |||||| | | |||| ||||||||||||||| |||||||| |||
Sbjct: 100 taatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagtat 168
|| |||||||| ||||| ||||||||||||||||||||
Sbjct: 40 tgctagaatgacttaca-ttgtgaaacggaggaagtat 4
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||||| | ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| | ||||||||||||||||||| ||||||||||| ||||||||||||| | | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||| | |||||||||||||| ||||
Sbjct: 125 ctagaatgacttata-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 153 bits (77), Expect = 1e-36
Identities = 138/156 (88%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||||| |||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||| |||||||||| || |||||||||||| | |||||||||||||||||
Sbjct: 96 atgaatctagat--atatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
||||||| ||| | ||||||||||||||||||||
Sbjct: 38 ccagaatgacttata-ttgtgaaacggaggaagtat 4
Score = 103 bits (52), Expect = 8e-22
Identities = 131/155 (84%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||||| |||||| | |||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| |||| | |||||||| | |||||||||||||| | |||||||||| |||||
Sbjct: 65 atgaatttagacatatatatatct--agattcattaacatgagtatgaatgtgaaaaatg 122
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 123 ctagaatgacttaca-ttgtgaaacggagggagta 156
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 138/157 (87%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||| ||||| ||||||||||| | | |||||||||| ||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgt 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||| | |||||| | | |||||||||||||| |||||||||||||||||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
|| || ||||| ||||| |||||||||||||||||||
Sbjct: 40 tgctaaaatgacttaca-ttgtgaaacggaggaagta 5
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| |||||||| | |||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%), Gaps = 10/156 (6%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 90 aatgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| |||||||||||||||||||
Sbjct: 39 gctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 123 bits (62), Expect = 9e-28
Identities = 134/158 (84%), Gaps = 10/158 (6%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||||||| | | ||||||||||||||||||||||||||||||||
Sbjct: 62 ttaatgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaa 112
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 113 atgctagaatgacttaca-ttgtgaaacggagggagta 149
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 139/159 (87%), Gaps = 1/159 (0%)
Strand = Plus / Minus
Query: 9 gtactactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||||||| ||||||||| ||||| ||| ||| |||| | |||| ||||||||
Sbjct: 162 gtactactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgat 103
Query: 69 gttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtggga 128
| |||| |||||||| | |||||| | | ||||||||||||| |||||||||||||||||
Sbjct: 102 ggtaatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtggga 43
Query: 129 aatgttagaatgatttacatttgtgaaacggaggaagta 167
|||| |||||||| ||||| |||||||||||||||||||
Sbjct: 42 aatgctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||| | |||||||||||||| ||||
Sbjct: 125 ctaaaatgacttaga-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 149 bits (75), Expect = 2e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| ||||||||| ||||||||||| |||| |||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| |||| |||||||||||||||||||
Sbjct: 38 ctagaatgacataca-ttgtgaaacggaggaagta 5
Score = 133 bits (67), Expect = 9e-31
Identities = 134/155 (86%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| || || ||||||||||| | | ||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||| | ||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 149 bits (75), Expect = 2e-35
Identities = 137/155 (88%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| |||| |||| ||||| |||||||||||| || |||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||||| |||||| | ||||||||||||||| ||||| ||| |||||||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| ||||| |||||||||||||| ||||
Sbjct: 124 ttagaatgacttaca-ttgtgaaacggagggagta 157
Score = 123 bits (62), Expect = 9e-28
Identities = 136/158 (86%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||| ||||| |||||| ||||| | ||| ||||| ||||
Sbjct: 159 actactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgt 100
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||||| |||| | | | ||||||||||| |||||||||||||||| ||||
Sbjct: 99 taatgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagtat 168
|| |||||||| ||||| ||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttaca-ttgcgaaacggaggaagtat 4
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 149 bits (75), Expect = 2e-35
Identities = 139/158 (87%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| || |||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||| | |||||||||| || |||||||||||||||||||||||| | |||||
Sbjct: 96 atgaatctag--acatatatatgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||| ||||| ||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttgtggaacggaggaagtatat 2
Score = 143 bits (72), Expect = 9e-34
Identities = 136/155 (87%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| || |||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| |||| | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 123 ctagaatgacttaca-ttgtggaacggagggagta 156
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 149 bits (75), Expect = 2e-35
Identities = 99/107 (92%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatattgatgttaataaatctagatagatatatat 94
|||| |||||||||||| | ||||||||||||||||||| |||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 95 gtttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
|| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 4
Score = 133 bits (67), Expect = 9e-31
Identities = 97/107 (90%)
Strand = Plus / Plus
Query: 35 aagttattctagcatttttcgcattcatattgatgttaataaatctagatagatatatat 94
|||| |||||||||||| | ||||||||||||||||||| |||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 95 gtttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatga 107
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 138/158 (87%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| ||| |||||||| || ||| |||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| | |||||| || |||||||||||| || | ||||||||||||||||
Sbjct: 99 aatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagtata 169
| |||||||| ||||| |||||||||||||||||||||
Sbjct: 39 gctagaatgacttaca-ttgtgaaacggaggaagtata 3
Score = 125 bits (63), Expect = 2e-28
Identities = 133/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| ||||||||||| ||||||||||| |||||||||| ||||| ||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctaaaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 147 bits (74), Expect = 6e-35
Identities = 139/159 (87%), Gaps = 5/159 (3%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatat----tgat 68
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 69 gttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtggga 128
|||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 129 aatgttagaatgatttacatttgtgaaacggaggaagta 167
|||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 125 aatgctagaatgacttaca-ttgtgaaacggagggagta 162
Score = 129 bits (65), Expect = 1e-29
Identities = 139/162 (85%), Gaps = 5/162 (3%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||| ||||| |||||||||||| | |||||||| |||||
Sbjct: 165 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatg 106
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatca----atatgaatgtg 125
||||| |||||||| | |||||| | | ||||||||||||||||| ||||||| ||
Sbjct: 105 ttaatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 45 cgaaatgctagaatgacttaca-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 137/157 (87%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| ||||||| ||||| | |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 132 gttagaatgatttacatttgtgaaacggaggaagtat 168
||||||| ||||| |||||||||||||| |||||
Sbjct: 124 actagaatgtcttaca-ttgtgaaacggagggagtat 159
Score = 91.7 bits (46), Expect = 3e-18
Identities = 91/106 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| ||||||| |||| | ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatat 118
|| |||||||| | |||||| | | |||||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatat 53
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 137/157 (87%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| || |||| ||||||| ||||||| ||||| | |||||||||||||
Sbjct: 3 actacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgc 62
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| ||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 63 taatgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaa 122
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| ||| | ||||| |||||||| ||||
Sbjct: 123 tgttagaatgacttata-ttgtggaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 130/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| || |||||||||||| |||||| ||||| || ||||||||||||| |
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||| | | |||||| | | || |||||||| ||||||||||||| ||| ||||
Sbjct: 99 aatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||| | |||| |||||||||||||
Sbjct: 39 actagaatgacttata-ctgtggaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 121/137 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | ||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | ||||||| | |||||||||||||| | ||||||||||||||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatt 149
||||||||| |||||||
Sbjct: 38 ttagaatgacttacatt 22
Score = 121 bits (61), Expect = 3e-27
Identities = 134/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||| ||| || || ||| ||||| |||||| ||||| | ||||||||| | |||
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgt 62
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||||| ||||| |||| |||||||||||||| | |||||||||||| |||
Sbjct: 63 taatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||||||| ||||| |||||||||||||| ||||
Sbjct: 123 tgctagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 137/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||| |||||| |||||||||||||||||||| || ||||||||||
Sbjct: 65 atgaatctagatag--gcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||| | ||||||||||||||||||||
Sbjct: 123 ctagaatgacttata-ttgtgaaacggaggaagtat 157
Score = 119 bits (60), Expect = 1e-26
Identities = 133/155 (85%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| |||||||||||| | | || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||| || | || ||| | ||||||||||||||||||||||||||||||||||
Sbjct: 96 atgaatctggacatatgcctatct--agattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 136/156 (87%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||| | ||||| ||| || ||||| || ||||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | ||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||| |||||||||||||| |||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagtat 159
Score = 133 bits (67), Expect = 9e-31
Identities = 134/155 (86%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| ||| ||||| |||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||||| ||||||||||||| ||||
Sbjct: 38 ataaaatgacttaca-atgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| || |||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| |||||||||||||||| |||||||| |||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 135/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||| | |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||| | ||||||||||| ||||||||||||||| |||||||||||| ||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 4e-33
Identities = 137/158 (86%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||| ||| ||||| |||||||||||| | |||||||||||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||| |||| || |||||||||| |||||||||||||||||||||||
Sbjct: 93 aatgaatctagacagat------gtctagattcattgacatcaatatgaatgtgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagtata 169
| |||||||| ||||| |||||||||||||||||||||
Sbjct: 39 gatagaatgacttaca-ttgtgaaacggaggaagtata 3
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||| ||||| | ||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | | ||| |||||||||| ||||||||||||||||||||||||
Sbjct: 65 atgaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||| ||||
Sbjct: 119 ctagaatgacttaca-ttatgaaacggagggagta 152
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 141 bits (71), Expect = 4e-33
Identities = 137/158 (86%), Gaps = 7/158 (4%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 155 tactactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatg 96
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
|||| |||||||| | |||| || ||||||||| ||||||||||||||||||||
Sbjct: 95 ctaatgaatctagacatatatcta------gattcattagcatcaatatgaatgtgggaa 42
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| |||||||| ||||| |||||||||||||||||||
Sbjct: 41 atgctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 132/155 (85%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||
Sbjct: 65 atgaatctagata------tatgtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||| | |||||||||||||| ||||
Sbjct: 119 ctagaatgacttata-ttgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 137/158 (86%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| |||||| ||| ||| ||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||||||||||||||| |||||||||| |||| |||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||| ||||| || ||||||||||| |||||||
Sbjct: 38 ctagaatgacttaca-ttatgaaacggagggagtatat 2
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| ||||||||||||| | ||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | ||||||||||| |||||||||| ||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||| ||||
Sbjct: 125 gtagaatgacttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 137/158 (86%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| ||||||| ||||||| ||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||| |||||||||| |||||||||| |||| |||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||| ||||| || ||||||||||| |||||||
Sbjct: 38 ctagaatgacttaca-ttatgaaacggagggagtatat 2
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| ||||||||||||| | ||||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| | | ||||||||||| |||| ||||| ||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||| ||||
Sbjct: 125 ctagaatgacttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 137/158 (86%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| |||||||| ||||| ||| |||||||| | |||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
| ||||| |||| ||||||||||||||| |||||||
Sbjct: 38 caaaaatgacttac-tttgtgaaacggagggagtatat 2
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| |||||||| ||||| ||| | |||||| | |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||| | | | ||||||||||||||||||||| |||||||||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| |||| ||||||||||||||||||||
Sbjct: 125 ctaaaatgacttac-tttgtgaaacggaggaagta 158
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 137 bits (69), Expect = 6e-32
Identities = 135/156 (86%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||| |||| | ||||||||||||||||
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtt 94
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| | | |||||||||| |||||| ||||| |||||||||||||||||| ||||
Sbjct: 93 aatgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| |||||||||||||||||||
Sbjct: 39 gctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
||||||| | || ||| | | || | |||||||||||||||||||||||| ||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 119 ctagaatgacttaca-ttgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 129 bits (65), Expect = 1e-29
Identities = 134/156 (85%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| ||||||||||||| | ||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| | | |||||||||| |||||| ||||| |||||||||||||| ||| ||||
Sbjct: 64 aatgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaat 117
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| |||||||||||||||||||
Sbjct: 118 gctagaatgacttaca-ttgtgaaacggaggaagta 152
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/155 (82%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||||| | ||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
||||||| | || ||| | | || | ||||||||||| |||||||||||| |||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||| ||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 127 bits (64), Expect = 6e-29
Identities = 134/155 (86%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| |||| ||| ||||||||||| ||||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | |||||||||| | |||||||||||||| | ||||||||||||||||
Sbjct: 96 atgaatcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||||| |||||||||||||||||||
Sbjct: 38 ctaaaatgacttaca-ttgtgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 131/158 (82%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||| ||||| ||| |||||||| | ||||||| | ||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatg 61
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||| ||| | |||||||| |||||||||||||||| ||||||||||| ||
Sbjct: 62 ttaatgaatcaagaca--tatatatgcatagattcattaacatctatatgaatgtgaaaa 119
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| || ||||| || || || ||||||||||| ||||
Sbjct: 120 atgctaaaatgacttgca-ttatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 127 bits (64), Expect = 6e-29
Identities = 133/157 (84%), Gaps = 13/157 (8%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 65 atgtatctagata------------tagatacattaacatcaatatgaatgtgggaaatg 112
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtata 169
|||||||| ||||| ||||| |||||||||||||||
Sbjct: 113 ctagaatgacttaca-ttgtggaacggaggaagtata 148
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||| ||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 73 tagatacattaacatcaatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatatg 171
||||| ||||||||
Sbjct: 14 ggagggagtatatg 1
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 125 bits (63), Expect = 2e-28
Identities = 134/158 (84%), Gaps = 11/158 (6%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
||||||| || ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| |||||||| ||||||||||||||| ||||| |||||||||||||
Sbjct: 88 atgaat----------atatatgtctagattcattaacattaatataaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||| ||||| ||||||||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttgtgaaacggaggaagtatat 2
Score = 95.6 bits (48), Expect = 2e-19
Identities = 122/147 (82%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | |||||| ||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatat----------tcattaacatcaatatgaatgtgggaaatg 114
Query: 133 ttagaatgatttacatttgtgaaacgg 159
|||||||| ||||| |||||||||||
Sbjct: 115 ctagaatgacttaca-ttgtgaaacgg 140
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 123 bits (62), Expect = 9e-28
Identities = 127/149 (85%), Gaps = 16/149 (10%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcatttt-------catattgatgtta 91
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgaatctagata--------tgtttagattcattaacatcaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggag 161
||||||||| ||||| |||||||||||||
Sbjct: 38 ttagaatgacttaca-ttgtgaaacggag 11
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
|||||| |||| ||||||||| ||||| |||||| ||||| | ||||||||||||||||
Sbjct: 4 ctactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 63
Query: 72 aataaatcta 81
||| ||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 126/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 16 tccctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaata 75
||||||| ||||||||| ||||| |||||||||| | || |||||||||||| | |
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 76 aatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgtta 135
|||||||| | | |||||||| |||||||||| ||||||||||||||||| |||||| ||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 136 gaatgatttacatttgtgaaacggagg 162
|||||| ||||| ||||||||||||||
Sbjct: 128 gaatgacttaca-ttgtgaaacggagg 153
Score = 121 bits (61), Expect = 3e-27
Identities = 126/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 16 tccctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaata 75
||||||| ||||||||| ||||| |||||||||||| || ||||||||||||||| |||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 76 aatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgtta 135
|||||||| | |||| ||||| |||||||| | |||||||||||||| || ||| ||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 136 gaatgatttacatttgtgaaacggagg 162
|||||| ||||| ||||||||||||||
Sbjct: 35 gaatgacttaca-ttgtgaaacggagg 10
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 134/157 (85%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||| ||| |||| |||||||||| || |||||||| |||||
Sbjct: 160 actactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgt 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||| | |||||||||| |||||||||||||||| ||||||||||||| ||
Sbjct: 100 taatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
| ||||| || ||||| || ||||||||||||||||
Sbjct: 40 tactagaaagacttaca-ttatgaaacggaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| |||||||| | |||||| ||| |||||||||||||||| |
Sbjct: 48 cattcatatagatgttaatgaatctagacatatatatgtgtctagattcattaacatcta 107
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| || | |||| ||||| | ||||| || ||||||||||| ||||
Sbjct: 108 tatgaatatgagcaatgctagaaagtcttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | ||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| || | | |||||| || ||||||||||| |||| |||||||| | | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||| ||||| |||||||||||||| |||||
Sbjct: 38 ttagaatgacttaca-ttgtgaaacggagggagtat 4
Score = 119 bits (60), Expect = 1e-26
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| |||||| |||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | ||||||||||||| |||||||| |||| |||||||||||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||| |||||||||||||| |||||
Sbjct: 125 ctagaatgacttaca-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 128/150 (85%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| |||||||||||| |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
| |||||| |||||||||||||| |||||||| |||| || ||||||||||||||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggagg 162
|||||||| ||||| || |||||||||||
Sbjct: 125 ctagaatgacttaca-ttatgaaacggagg 153
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 14 actccctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaa 73
||||||||| ||||| ||| ||||| |||||||||||| | ||||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 74 taaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgt 133
| |||||||| | |||||| | | |||||||| |||| || |||||||| | |||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 134 tagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||| ||||
Sbjct: 37 tagaatgacttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 115 bits (58), Expect = 2e-25
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-t 23
Query: 150 tgtgaaacggaggaagta 167
||||||||||||||||||
Sbjct: 22 tgtgaaacggaggaagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 113 bits (57), Expect = 8e-25
Identities = 132/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||||||| |||| | ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||||||||||| || ||||| |||| |||||||||||||||||||||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
| |||||| ||||| || ||||||||||| ||||
Sbjct: 122 gtggaatgacttaca-ttatgaaacggagggagta 155
Score = 85.7 bits (43), Expect = 2e-16
Identities = 130/157 (82%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||| ||| ||||| |||| | ||||| | ||||||||||||||
Sbjct: 157 actactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgc 98
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
||| ||||||| ||||| | | ||||||||||| ||||||||||||||||||||
Sbjct: 97 caatggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||| | |||||||||||||||||||
Sbjct: 40 tactagaatgacttata-ttgtgaaacggaggaagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 75/80 (93%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 88 tatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttaca 147
||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 148 tttgtgaaacggaggaagta 167
|||||||||||||| ||||
Sbjct: 23 -ttgtgaaacggaggtagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||| ||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 83 acatcaatatgtatgtacaaaatgctagaatgacttacatt-gtgaaacggaggaagta 140
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 111 bits (56), Expect = 3e-24
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 76 aatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgtta 135
||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 136 gaatgatttacatttgtgaaacggaggaagta 167
|||||| ||||| || ||||||||||| ||||
Sbjct: 35 gaatgacttaca-ttatgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| |||||||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 73 ataaatctagatagatatat 92
|| |||||||| | ||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 132/156 (84%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| ||||| ||||||||| | || ||||||||| ||||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||||| || | ||||| |||||||||||||||| |||||||| | || |||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| || ||||||||||| ||||
Sbjct: 39 gctagaatgacttaca-ttatgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 131/157 (83%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||| ||| ||||| ||||||||||| |||||||| |||||
Sbjct: 3 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 62
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||| | | | |||| | |||||||||||||||| ||||||||||| | |
Sbjct: 63 taatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcat 122
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||||||| ||||| || ||||||||||||||||
Sbjct: 123 tgctagaatgacttaca-ttatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 133/158 (84%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||| |||| | |||||||| || ||||||||| ||||
Sbjct: 2 tactactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatg 61
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||||||| | | |||||| | |||||||||||||||| || |||||||||| |
Sbjct: 62 ttaatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggca 121
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| || | ||||| |||||||||||||| ||||
Sbjct: 122 atgttaaaaagtcttaca-ttgtgaaacggagggagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 129/157 (82%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||| |||| || || |||| | |||||| || |||||
Sbjct: 160 actactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgt 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||||| |||| | ||| |||||||||||||||| ||||||||||| | ||
Sbjct: 100 taatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
|| ||| | | ||||| |||||||||||||| ||||
Sbjct: 40 tgctaggaagtcttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 107 bits (54), Expect = 5e-23
Identities = 94/105 (89%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 63 attgatgttaataaatctagatagatatatatgtttagattcattaacatcaatatgaat 122
|||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatatat--gtctagattcattaacatcaatatgaat 105
Query: 123 gtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| || ||||| ||| | |||||||||||||| ||||
Sbjct: 106 atgggaaatgctaaaatgacttata-ttgtgaaacggagggagta 149
Score = 89.7 bits (45), Expect = 1e-17
Identities = 90/104 (86%), Gaps = 2/104 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| ||| |||||||| | ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaat 116
|| ||||||| | |||||| | | |||||||||||||||||||
Sbjct: 89 atgaatctag--acatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 107 bits (54), Expect = 5e-23
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 88 tatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttaca 147
||||||||| |||||||||||| || ||||||||||||||||||| |||||||| |||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 148 tttgtgaaacggaggaagtata 169
|||||||||||||||||||||
Sbjct: 117 -ttgtgaaacggaggaagtata 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatatt 65
|||||||||||||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 3e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaatggagggagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 75 atgaatctaga 65
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 107 bits (54), Expect = 5e-23
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 68 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttaca-ttgtgaaac 126
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 127 ggagggagta 136
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| ||||| | |||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 73 ataaatctagatagatat 90
|| |||||||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 132/157 (84%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||| ||| ||||| ||||||||||| |||||||| |||||
Sbjct: 160 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||||| | | |||| | |||||||||||||||| ||||||||||| | |
Sbjct: 100 taatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcat 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||||||| ||||| || ||||||||||||||||
Sbjct: 40 tgctagaatgacttaca-ttatgaaacggaggaagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| ||||| ||||||||| | || ||||||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||||||| || | ||| | |||||||||||||||| |||||||| | || |||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| || ||||||||||| ||||
Sbjct: 124 gctagaatgacttaca-ttatgaaacggagggagta 158
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 40 attctagcatttttcgcattcatattgatgttaataaatctagatagatatatatgttta 99
||||||||||||| | ||||||||| | ||||||| |||||||| | ||||||| | ||
Sbjct: 2 attctagcattttccacattcatataggtgttaatgaatctagacatctatatatatcta 61
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatg 140
|||||||||||| | ||||||||||||||||||||||||||
Sbjct: 62 gattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 89.7 bits (45), Expect = 1e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| | ||||||| |||||||||| ||||| |||| |||||||||||||| | |
Sbjct: 85 cattcatataggtgttaatgaatctagatatatatagatgtctagattcattaacaccta 26
Query: 116 tatgaatgtgggaaatgttagaatg 140
||||||||||| ||||| |||||||
Sbjct: 25 tatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 132/157 (84%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| |||| || ||||||| || ||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | | |||||| | |||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtata 169
||||| | ||||| || ||||||||||||||||||
Sbjct: 125 ctagaaagtcttaca-ttatgaaacggaggaagtata 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| |||||||| | |||| | ||| |||||||||||||||| |
Sbjct: 115 cattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatcta 56
Query: 116 tatgaatgtg 125
||||||||||
Sbjct: 55 tatgaatgtg 46
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 132/157 (84%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| |||| || ||||||| || ||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | | |||||| | |||||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtata 169
||||| | ||||| || ||||||||||||||||||
Sbjct: 38 ctagaaagtcttaca-ttatgaaacggaggaagtata 3
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| |||||||| | |||| | ||| |||||||||||||||| |
Sbjct: 48 cattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaacatcta 107
Query: 116 tatgaatgtg 125
||||||||||
Sbjct: 108 tatgaatgtg 117
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 103 bits (52), Expect = 8e-22
Identities = 83/91 (91%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 77 atctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttag 136
|||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 42 atctagatagatatat--gtctagatccattaacatcaatatgaatgtgggaaatgctag 99
Query: 137 aatgatttacatttgtgaaacggaggaagta 167
||||| ||||| || ||||||||||||||||
Sbjct: 100 aatgacttaca-ttatgaaacggaggaagta 129
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 72 aataaatctaga 83
||| |||||||
Sbjct: 70 aatggatctaga 59
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 73 ataaatctagat 84
|| |||||||||
Sbjct: 65 atgaatctagat 76
Score = 73.8 bits (37), Expect = 7e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||||||||||||||| ||||| |||||| | ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgaaaaatgctagaataacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatat 170
||||| |||||||
Sbjct: 14 ggagggagtatat 2
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 103 bits (52), Expect = 8e-22
Identities = 65/68 (95%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 13
Query: 160 aggaagta 167
||||||||
Sbjct: 12 aggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
|||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattaca-ttgtgaaacgg 133
Query: 160 aggaagta 167
||| ||||
Sbjct: 134 agggagta 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 73 ataaatc 79
|| ||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattgacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtata 169
||||||||||||
Sbjct: 14 ggaggaagtata 3
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||||||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaacggagggagta 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||| ||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 67 tagattcattaacatcaatatgaatgtgggaaatgttagaatgacttata-ttgtgaaac 125
Query: 158 ggaggaagtata 169
||||| ||||||
Sbjct: 126 ggagggagtata 137
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| |||||| ||||| | |||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 73 ataaatctagata 85
|| ||||||||||
Sbjct: 75 atgaatctagata 63
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 73.8 bits (37), Expect = 7e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
|||||||||||||||||||| ||||| |||||||| ||| | ||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttata-ttgtgaaacggaggaagt 6
Query: 167 a 167
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| ||||||||||| | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | | || ||| | || ||||||||||||| ||||| ||||||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 132/158 (83%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| ||||| ||||||||||| | ||| ||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||| |||||| | || | ||| |||||||||||||||| |||||||| |||| |||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 132 gttagaatgatttacatttgtgaaacggaggaagtata 169
| |||||||| ||||| || ||||||||||| ||||||
Sbjct: 124 gctagaatgacttaca-ttatgaaacggagggagtata 160
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 129/156 (82%), Gaps = 13/156 (8%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| ||||| ||||||||||||| | ||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||| ||| ||| ||||||||||||||||||||||||||||||
Sbjct: 64 aatgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaat 111
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| ||||||||| |||| ||||
Sbjct: 112 gctagaatgacttaca-ttgtgaaaccgagggagta 146
Score = 101 bits (51), Expect = 3e-21
Identities = 129/156 (82%), Gaps = 13/156 (8%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
|||||||||| ||||||||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| || ||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 87 aatgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| || ||||||||||||||||
Sbjct: 39 gctagaatgacttaca-ttatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 101 bits (51), Expect = 3e-21
Identities = 128/155 (82%), Gaps = 14/155 (9%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|||||||||||||||| ||| || |||||||||||||||||||||||
Sbjct: 85 ataaatctagatagatctat-------------ctatcatcaatatgaatgtgggaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||||| |||||||||||||||||||
Sbjct: 38 ctaaaatgacttaca-ttgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||||||||||||| ||| || |||||| |||||||| ||||| |||||||||
Sbjct: 77 tagatttattaacatcaatataaatatgagaaatgctagaatgacttaca-ttgtgaaac 135
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 136 ggagggagta 145
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 101 bits (51), Expect = 3e-21
Identities = 131/155 (84%), Gaps = 7/155 (4%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| ||| ||||||||| | |||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||| ||||||| | || |||||||| ||||||| | |||||| ||||||
Sbjct: 92 atgaatctag--agatata----tctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| ||||| ||||| |||||||||||||||||||
Sbjct: 38 ctaaaatgacttaca-ttgtgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 127/156 (81%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| |||||||| || |||| | ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| |||||| ||| | ||||||||||| ||||||||| ||||||| |||||
Sbjct: 65 atgaatttagata------tatctctagattcattagcatcaatataaatgtggaaaatg 118
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|| ||||| ||| | |||||||||||||| |||||
Sbjct: 119 ctaaaatgacttata-ttgtgaaacggagggagtat 153
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| |||||||||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| ||| ||||| ||| ||||||||||| |||| || |||||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||| | ||||| || ||||||||||||||||
Sbjct: 38 ctagaaagtcttaca-ttatgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
|||||| || |||| |||| |||||||| | ||||| | | |||||||||||||||| |
Sbjct: 48 cattcacatagatgctaatgaatctagacacatataagtatatagattcattaacatcta 107
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||| |||| ||||| | ||||| |||||||||||||| ||||
Sbjct: 108 tatgaatgcgggcaatgctagaaagtcttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 93 atgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgt 152
|||||||||||||||||||||||||||||||||||| ||| |||||||| ||| | ||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttata-ttgt 117
Query: 153 gaaacggaggaagta 167
|||||||||||||||
Sbjct: 118 gaaacggaggaagta 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| ||||||||||||| | ||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||||||||| |||||||||| | | ||||||||||||||||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 72 aataaatcta 81
||| ||||||
Sbjct: 73 aatgaatcta 64
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 108 aacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 66/70 (94%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagtatat 170
||||||||||
Sbjct: 11 ggaagtatat 2
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||| |||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 73 ataaatctagatag 86
|| ||| |||||||
Sbjct: 65 atgaatgtagatag 78
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
|||||||||| ||||| ||| ||||| ||| ||| ||||||| |||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| | |
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttata-t 121
Query: 150 tgtgaaacggaggaagta 167
| ||||||||||||||||
Sbjct: 122 tatgaaacggaggaagta 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||||||||| |||||| |||||| | ||||||||||||||||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 72 aataaatctaga 83
||| ||||||||
Sbjct: 80 aatgaatctaga 69
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| |||||||||||| || |||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 73 ataaatctagatag 86
|| |||||||||||
Sbjct: 67 atgaatctagatag 54
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| |||||| |||||||| ||| | |||||||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttata-ttgtgaaac 117
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 118 ggaggaagta 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| |||||||| ||||||| |||||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacatt-gtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||| ||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| ||||||||||||| | |||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 73 ataaatcta 81
|| ||||||
Sbjct: 80 atgaatcta 72
Score = 89.7 bits (45), Expect = 1e-17
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
|||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||| | ||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttata-tt 123
Query: 151 gtgaaacggaggaagta 167
|||||||||||| ||||
Sbjct: 124 gtgaaacggagggagta 140
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
|||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacg 14
Query: 159 gaggaagta 167
|||||||||
Sbjct: 13 gaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| |
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttac-tttgtgaaacggaggga 134
Query: 165 gta 167
|||
Sbjct: 135 gta 137
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 73 ataaatct 80
|| |||||
Sbjct: 65 atgaatct 72
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 5e-20
Identities = 131/157 (83%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||| ||| ||||| |||||||| || | || ||||| |||||
Sbjct: 3 actacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgt 62
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||||||| | | |||||||||||||||||| |||| ||||||||||||| ||
Sbjct: 63 taatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaa 122
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagta 167
|| || ||||| ||||| || ||||||||||| ||||
Sbjct: 123 tgctaaaatgacttaca-ttatgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 5e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| ||| ||||||| | ||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | | || | ||| | |||||||||||||||| ||||| || |||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttatgaaacggaggaagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/155 (83%), Gaps = 8/155 (5%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| |||||| |||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| || ||| || || || || ||||||||||||||||| ||||||||||||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| |||||||||||||||||||
Sbjct: 118 ctagaatgacttaca-ttgtgaaacggaggaagta 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
|||||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttata-ttgtgaaacggag 11
Query: 162 gaagtata 169
| ||||||
Sbjct: 10 ggagtata 3
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 71 taataaatctaga 83
|||| ||||||||
Sbjct: 63 taatgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 44/48 (91%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||||||| || || || ||||||||||||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttcca-ttatgaaacggaggaagta 134
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 97.6 bits (49), Expect = 5e-20
Identities = 71/77 (92%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
|||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| | ||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttata-tt 123
Query: 151 gtgaaacggaggaagta 167
|||||||||||| ||||
Sbjct: 124 gtgaaacggagggagta 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 73 ataaatcta 81
|| ||||||
Sbjct: 80 atgaatcta 72
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaa 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||| ||||| ||||||||||||| | || | |||||||||
Sbjct: 142 tactactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatg 83
Query: 70 ttaataaatctagatagata 89
|||||||||||| |||||||
Sbjct: 82 ttaataaatctatatagata 63
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| |||||||||||||| | ||||| ||||| |||||||| ||||| |||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttaca-ttgtgaaac 129
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 130 ggagggagta 139
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||||||||||||| ||||| ||| ||||||||||| || | ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaacgg 126
Query: 160 aggaagta 167
||||||||
Sbjct: 127 aggaagta 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||| ||||| ||| |||||||| | ||||||||||||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 72 aataaatctagata 85
||| |||| |||||
Sbjct: 75 aatgaatcaagata 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||| ||||||||| ||||| ||| | ||||||| | |||||||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||| ||||| | ||||| ||||| ||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttaca-ttgtgaaacgga 12
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 93.7 bits (47), Expect = 8e-19
Identities = 130/156 (83%), Gaps = 10/156 (6%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
|||||||||| ||||||||| ||||| |||||||||||| || ||||||||||||||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| || ||| | | || |||||||||||||||||||||||||||| ||||
Sbjct: 90 aatgaaactatgtc-----acat----agattcattaacatcaatatgaatgtggaaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| || ||||||||||||||||
Sbjct: 39 gctagaatgacttaca-ttatgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 129/156 (82%), Gaps = 10/156 (6%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| ||||| ||||||||||||| | ||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| |||||| | || | ||| |||||||||||||||||||||||| |||||
Sbjct: 64 aatgaatctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaat 114
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||||| ||||||||| |||| ||||
Sbjct: 115 gctagaatgacttaca-ttgtgaaaccgagggagta 149
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtat 168
||| |||||||
Sbjct: 14 ggaagaagtat 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 121/147 (82%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattgatgttaataaatctaga 83
||||||||| ||||| |||||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctaga 75
Query: 84 tagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| |||||||||||| |||||||| ||| ||| ||||| |||||||| |
Sbjct: 76 ------------tgtagattcattaatatcaatataaatatggaaaatgctagaatgact 123
Query: 144 tacatttgtgaaacggaggaagtatat 170
|||| |||||||||||||| |||||||
Sbjct: 124 taca-ttgtgaaacggagggagtatat 149
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 93.7 bits (47), Expect = 8e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||||||||||||||||| | || | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 73 ataaatctagatagatata 91
|| |||||| |||||||||
Sbjct: 65 atgaatctatatagatata 83
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||| | ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| ||||||||||| ||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | | || ||| | || ||||||||||||| |||| ||||||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||||||||
Sbjct: 125 ctagaatgacttaca-ttatgaaacggaggaagta 158
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/155 (82%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| ||||||||||| | ||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||| |||||| | || | ||| |||||||||||||||| |||||||||| || ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||| ||||| || ||||||||||| ||||
Sbjct: 38 ctagaatgacttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtat 168
||| |||||||
Sbjct: 14 ggaagaagtat 4
Score = 83.8 bits (42), Expect = 7e-16
Identities = 120/147 (81%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattgatgttaataaatctaga 83
||||||||| ||||| |||||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctaga 75
Query: 84 tagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
| |||||||||||| |||||||| ||| ||| ||||| || ||||| |
Sbjct: 76 ------------tgtagattcattaatatcaatataaatatggaaaatgctataatgact 123
Query: 144 tacatttgtgaaacggaggaagtatat 170
|||| |||||||||||||| |||||||
Sbjct: 124 taca-ttgtgaaacggagggagtatat 149
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| |||||||||| | | || ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| ||| ||| | |||| |||||||||||||| | | ||||||||||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||| | ||||| |||||||||||||||||||
Sbjct: 38 ctagaaagtcttaca-ttgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 125/155 (80%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| |||| |||||||||| | ||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | | ||||| |||||||||||||||||| ||||| || ||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||| | ||||| |||||||||||||| ||||
Sbjct: 125 ctagaaagtcttaca-ttgtgaaacggagggagta 158
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 8e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||||||||| ||||||| |||||||| ||||| ||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttaca-ttgtgaaacgga 107
Query: 161 ggaagta 167
|||||||
Sbjct: 108 ggaagta 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 72 aat 74
|||
Sbjct: 55 aat 53
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| |||||||||||||||||||||| |||||||| ||||| || ||||||
Sbjct: 47 tagattcattaatatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaac 105
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 106 ggaggaagtat 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| |||||||||||| | ||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 73 ataaatctagata 85
|| ||||||||||
Sbjct: 55 atgaatctagata 43
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcat 49
||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| || ||||||
Sbjct: 72 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttatgaaac 130
Query: 158 ggaggaagtat 168
|||||||||||
Sbjct: 131 ggaggaagtat 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 73 ataaatctagat 84
|| |||||||||
Sbjct: 80 atgaatctagat 69
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 93.7 bits (47), Expect = 8e-19
Identities = 127/156 (81%), Gaps = 17/156 (10%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| || ||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||| || |||| |||||||||||||| |||||||||
Sbjct: 65 atgaatctagat----------------atccattgacatcaatatgaatatgggaaatg 108
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||||| ||||||||||||||||||||
Sbjct: 109 ctagaatgacttaca-ttgtgaaacggaggaagtat 143
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| ||||||||||||||| |||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaatatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgt 85
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 71 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaac 129
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 130 ggagggagta 139
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 79 atgaatctaga 69
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 91.7 bits (46), Expect = 3e-18
Identities = 126/154 (81%), Gaps = 14/154 (9%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| |||||| |||||||||||||| |||||| ||||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagt 166
|||||||| ||||| || |||||||||||||||
Sbjct: 38 ctagaatgacttaca-ttatgaaacggaggaagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 123/150 (82%), Gaps = 14/150 (9%)
Strand = Plus / Plus
Query: 18 cctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaataaa 77
||||| ||||| ||| ||||| |||||||||||| || |||| |||||||||||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 78 tctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttaga 137
||||| | ||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 70 tctag-------------tctagattcattaacatcaatatgaatatggaaaatgctaga 116
Query: 138 atgatttacatttgtgaaacggaggaagta 167
|||| ||||| |||||||||||||| ||||
Sbjct: 117 atgacttaca-ttgtgaaacggagggagta 145
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| |||||||| | |||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 73 ataaatctag 82
|| |||||||
Sbjct: 65 atgaatctag 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 104 cattaacatcaatatgaatgtgggaaatgttaga-atgatttacatttgtgaaacggagg 162
||||| ||||||||||||||||||||||| || | |||| ||||| ||||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttaca-ttgtgaaacggagg 138
Query: 163 aagta 167
||||
Sbjct: 139 gagta 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttat-tctagcatttttcgcattcatattgatg 69
|||||||||||| ||||||||| ||||| || | |||||||| | ||||||||||||||
Sbjct: 145 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 86
Query: 70 ttaat 74
||||
Sbjct: 85 ctaat 81
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| |||||||||||| | ||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 72 aataaatcta 81
||| ||||||
Sbjct: 64 aatgaatcta 73
Score = 65.9 bits (33), Expect = 2e-10
Identities = 49/53 (92%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatat 64
||||||||||| ||||||||| ||||| |||||||||||| | |||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 98/114 (85%), Gaps = 1/114 (0%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||| ||||||||||| ||| ||| |||| ||||||||||| |||| |
Sbjct: 48 cattcatatagatgctaataaatctatatatataataatgtctagattcattagcatcta 107
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtata 169
|||||||||||| |||||||||| | ||||| |||||||||||||| ||||||
Sbjct: 108 tatgaatgtgggcaatgttagaaagtcttaca-ttgtgaaacggagggagtata 160
Score = 54.0 bits (27), Expect = 7e-07
Identities = 124/155 (80%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| ||||| |||| | ||||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | ||||| | |||||| |||| |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| || | ||||| || ||||||||||||||||
Sbjct: 38 ctataaagtcttaca-ttatgaaacggaggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| || ||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 76 tagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 134
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 135 ggaggaagta 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/156 (80%), Gaps = 15/156 (9%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 85 cataaatctaga--------------caaattcatgaacatcaatatgaatgtgggaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| ||||||| ||||| |||||||||||||| ||||
Sbjct: 39 gctagaatggcttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 131/158 (82%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
||||||||||| ||||| ||| ||||| ||| ||||||||||| |||||| | |||||
Sbjct: 160 actactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgt 101
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|| | |||||||| | ||||| || ||||||||| ||||||| |||| ||| || ||||
Sbjct: 100 tagtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaa 41
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagtat 168
|| |||||||| ||||| || ||||||||||| |||||
Sbjct: 40 tgctagaatgacttaca-ttatgaaacggagggagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| |||||||||||| || ||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
| |||||| || ||||||||| |||||||| ||||||| | |||||||| |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 133 ttagaatgatttacatt 149
|| ||||| |||||||
Sbjct: 125 ctacaatgacttacatt 141
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||
Sbjct: 75 tagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaac 133
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| |||||||| | |||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 73 ataaatctag 82
|| |||||||
Sbjct: 83 atgaatctag 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 58/65 (89%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 104 cattaacatcaatatgaatgtgggaaatgttaga-atgatttacatttgtgaaacggagg 162
||||| ||||||||||||||||||||||| || | |||| ||||| ||||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttaca-ttgtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttat-tctagcatttttcgcattcatattgatg 69
|||||||||||| ||||||||| ||||| || | |||||||| | ||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatg 62
Query: 70 ttaat 74
||||
Sbjct: 63 ctaat 67
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaac 120
Query: 158 ggaggaagta 167
|||| ||||
Sbjct: 121 agagggagta 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
||||||||| ||||||||| ||||| |||||||||||| | |||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 73 ataaatcta 81
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattgatgttaata 75
||||||||||||||| ||| ||||||||| | ||||||||||||||||||||
Sbjct: 12 tttcacaatataagtcattatagcattttccacattcatattgatgttaata 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||||| ||||| || ||||| ||| | ||||||||| ||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttata-ttgtgaaacagaggaa 4
Query: 165 gta 167
|||
Sbjct: 3 gta 1
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
||||||||||||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgca-ttgtgaaacggag 11
Query: 162 gaagta 167
||||||
Sbjct: 10 gaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||||||| |||| |||||||||||| | |||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgt 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagg 125
Query: 163 aagtat 168
||||||
Sbjct: 126 aagtat 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaag 165
|||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||| ||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggag 7
Query: 166 ta 167
||
Sbjct: 6 ta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | ||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 73 a 73
|
Sbjct: 65 a 65
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 73 at 74
||
Sbjct: 70 at 69
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 76/85 (89%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||||||| |||||||||||||||| ||||||||||| | |||| |||||||| ||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 147 atttgtgaaacggaggaagtatatg 171
| || ||||| ||||||||||||||
Sbjct: 113 a-ttatgaaatggaggaagtatatg 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||||||||| ||| ||||| ||||||||||| | ||||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 73 ataaatctagatagatatat 92
|| |||||||| | ||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatt 50
|||||||||| ||||| ||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 89 atatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
|||||||| ||||||||||| | ||||||||||||||||||| |||||||| |||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttaca- 111
Query: 149 ttgtgaaacggaggaagtata 169
|||||||||||||||||||||
Sbjct: 112 ttgtgaaacggaggaagtata 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatat 64
|||| ||||| ||||||||| |||||||||||||||||| || |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||||| |||||| | ||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacatt-gtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatatt 65
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 87.7 bits (44), Expect = 5e-17
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| ||||||||||| | | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 73 ataaatctagatagatatatatgt 96
|| |||||||||||||||| ||||
Sbjct: 70 atgaatctagatagatataaatgt 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||| | ||| ||||| || ||||| ||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttaca-ttgtgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 13
Query: 160 aggaagta 167
||| ||||
Sbjct: 12 agggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
||||||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttaca-ttatgaaacgg 130
Query: 160 aggaagta 167
||| ||||
Sbjct: 131 agggagta 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||| ||||| |||||||||||| | ||||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 70 ttaataaatc 79
|||| ||||
Sbjct: 62 ctaatgaatc 71
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||| |||||||||||| | |||||||||||||| ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 73 ataaatc 79
|| ||||
Sbjct: 78 atgaatc 72
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 5e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 89 atatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
|||| ||| |||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttaca- 24
Query: 149 ttgtgaaacggaggaagtat 168
|| |||||||||||||||||
Sbjct: 23 ttatgaaacggaggaagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| ||||||| |||| || |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatatt 65
||||||||||||||||| ||| ||||| |||||||||||| || ||||||||||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||||||| |||||| |||||||| |||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacatt 113
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 93/108 (86%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 60 catattgatgttaataaatctagatagatatatatgtttagattcattaacatcaatatg 119
||||| ||||||||| |||||| ||| ||| |||||| |||||||||||||||| | |||
Sbjct: 111 catatggatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatg 52
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||| |||| |||| ||||| | ||||| |||||||||||||||||||
Sbjct: 51 aatatgggcaatgctagaaagtcttaca-ttgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||| | ||||||||| |||||||| | || ||| | |||||||||||||||||| ||
Sbjct: 49 attcatttagatgttaatgaatctagacatatgtatgtatttagattcattaacatccat 108
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||| | ||||| ||| ||||| | ||||| |||||||||||||| |||||
Sbjct: 109 atgtacgtgggcaatactagaaagtcttaca-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 87.7 bits (44), Expect = 5e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||||||| |||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 73 ataaatctagatagatatatatgt 96
|| |||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgt 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||| || ||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattatcatcaatataaatatgagaaatactagaatgacttata-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
Score = 83.8 bits (42), Expect = 7e-16
Identities = 71/78 (91%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 93 atgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgt 152
|||||||||||||| ||||||||||||||||||| ||||| |||||| | ||||| ||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttaca-ttgt 20
Query: 153 gaaacggaggaagtatat 170
|||||||||| |||||||
Sbjct: 19 gaaacggagggagtatat 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 108 aacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||| ||| ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttaca-ttgtgaaacggaggaagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||||||| ||||| ||||||||||||| | ||||||||||||||
Sbjct: 133 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 74
Query: 71 t 71
|
Sbjct: 73 t 73
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/155 (82%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| |||||||||| | |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||||| | || ||| ||||||||||||||||||| ||||| ||||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||||| | ||||| |||||||||||||||||||
Sbjct: 38 ctagaaagtcttaca-ttgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 128/158 (81%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||||||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgt 62
Query: 71 taataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|||| |||||| | | ||| |||||| ||||||||||| |||| | |||||| |||| ||
Sbjct: 63 taatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaa 122
Query: 131 tgttagaatgatttacatttgtgaaacggaggaagtat 168
|| ||||| | ||||| |||||||||||||| |||||
Sbjct: 123 tgctagaaagtcttaca-ttgtgaaacggagggagtat 159
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| ||||||||||||||||| | | ||||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 73 ataaatctaga 83
|||||||||||
Sbjct: 77 ataaatctaga 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 92 tatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttg 151
||||| |||||| ||||||||| |||||||||||| |||| |||||| | ||||| ||
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttaca-tta 121
Query: 152 tgaaacggaggaagtata 169
||||||||||| ||||||
Sbjct: 122 tgaaacggagggagtata 139
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatt 50
||||||| ||||| ||||| ||| |||||||||||||||||
Sbjct: 2 tactacttcctccgtttcataatgtaagttattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 118 tgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||| |||| |||||| | ||||||| ||||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacatta-tgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttaca-ttgtgaaacgga 119
Query: 161 ggaagta 167
|||||||
Sbjct: 120 ggaagta 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| |||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacatt-gtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||| |
Sbjct: 128 actacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatat 69
Query: 71 taat 74
||||
Sbjct: 68 taat 65
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 89 atatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
|||||| | ||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttaca- 111
Query: 149 ttgtgaaacggaggaagta 167
| |||||||||||| ||||
Sbjct: 112 tggtgaaacggagggagta 130
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| |||||| || ||||| | |||| |||||| | ||||||||||||||||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 72 aataaatctagatagatat 90
||| |||||||||| ||||
Sbjct: 71 aatgaatctagatatatat 53
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 61
Query: 70 ttaat 74
|||||
Sbjct: 62 ttaat 66
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| |||| ||||| ||| ||||| ||||||||||||| | ||||||||||||||
Sbjct: 130 ctactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||||||||| ||| ||||| |||||||| |||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacatt 112
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| |||||||| | |||| | |||||||||||||||||||| |
Sbjct: 48 cattcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatcta 107
Query: 116 tatgaatgtgg 126
|||||||||||
Sbjct: 108 tatgaatgtgg 118
Score = 81.8 bits (41), Expect = 3e-15
Identities = 96/113 (84%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| |||||| | | | |||||||| |||||||||||||||| |
Sbjct: 115 cattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacatcta 56
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||| | |||| ||||| | ||||| || |||||||||||||||||
Sbjct: 55 tatgaatgtagacaatgctagaaagtcttaca-ttatgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||| ||||||||||||| |||||| |||||||| ||||| ||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| || ||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 73 at 74
||
Sbjct: 65 at 66
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttt 52
|||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcatttt 91
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||| ||| ||||| |||||||| ||||||| |||||||||||| |||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacatt-gtgaaacggagggagtat 131
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||||||| |||||||||| |||||| || |||||||||||||||| |
Sbjct: 24 cattcatatatatgttaatgaatctagatatatatatgtgcctagattcattaacatcta 83
Query: 116 tatgaatgtgggaaatgttagaa 138
|||||||||||| |||| |||||
Sbjct: 84 tatgaatgtgggcaatgctagaa 106
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| ||||||| | |||||||| | ||||||||||||||| |
Sbjct: 91 cattcatatagatgttaatgaatctaggcacatatatatatctagattcattaacatata 32
Query: 116 tatgaatgtgggaaatgttagaa 138
|||||||||||| |||| |||||
Sbjct: 31 tatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| |||||||||| | ||| ||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatg 123
||||||||||| | ||| ||||||||||||||||||||||| | |||||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
Score = 63.9 bits (32), Expect = 7e-10
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||| | ||||||||| |||||| | | || ||||||| |||||| ||||||||| |
Sbjct: 48 cattcatttagatgttaatgaatctaaacatatgtatatgtctagatttattaacatcta 107
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||| ||||||| |||| ||||| | ||||||| |||||||||||| ||||
Sbjct: 108 aatgtatgtgggcaatgctagaaagtcttacatt-gtgaaacggagggagta 158
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||| ||| |||| |||||| |||||||| ||||||||||||||||
Sbjct: 131 ctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 72 aataaatctagatagatat 90
||| |||||||||||||||
Sbjct: 71 aatgaatctagatagatat 53
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| ||||| ||||||| ||||| || ||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttaca-ttatgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatat 64
|||||||||| ||||||||||||||| |||||||||||| | |||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| |||||||| ||| | |||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||| ||||||| |||||||| ||||| || ||||||
Sbjct: 55 tagattcattaacatcaatatgaatgtaggaaatgctagaatgacttaca-ttatgaaac 113
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 114 ggagggagta 123
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||| ||| ||||| |||||||||||| ||||||||||||||
Sbjct: 126 tactactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatg 67
Query: 70 ttaataaatctagata 85
||||| ||||||||||
Sbjct: 66 ttaatgaatctagata 51
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 128 aaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacatt-gtgaaacggaggaagtat 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttt 52
|||| ||||| ||||||||| ||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt 44
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||| ||||||||| || ||||||| ||| |||||| |||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctat 108
Query: 117 atgaatgtgg 126
||||||||||
Sbjct: 109 atgaatgtgg 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| || ||| ||| | | ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtggg 127
|| |||||||| | || ||||| | ||| |||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatggg 44
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 83.8 bits (42), Expect = 7e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| |||||||||||||||| ||||||||||||| |||| ||||| || ||||| |
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttaca-t 23
Query: 150 tgtgaaacggaggaagta 167
| ||||||||||||||||
Sbjct: 22 tatgaaacggaggaagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagtat 4
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| |||||||||||| | |||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 73 ataaatctagata 85
|| ||||||||||
Sbjct: 72 atgaatctagata 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||| ||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 64 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaac 122
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 123 ggagggagta 132
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca-ttatgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/156 (80%), Gaps = 13/156 (8%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||| ||| ||||| ||| || ||||| | ||||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||||| ||||||||||||||||||||||||| | | ||||
Sbjct: 64 aatgaatctagatc------------tagattcattaacatcaatatgaatatagtaaat 111
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||| | ||||| |||||||||||||
Sbjct: 112 gctagaatgacttata-ttgtggaacggaggaagta 146
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| | |||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 73 ataaatctagatagatat 90
|||||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagtat 137
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||| ||||| ||||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 61.9 bits (31), Expect = 3e-09
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
||||| |||||||| ||||||| ||||| |||||||| ||||||| |||||||||||| |
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacatt-gtgaaacggaggga 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct: 78 tagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttaca-ttatgaaac 136
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 137 ggagggagta 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 125/156 (80%), Gaps = 13/156 (8%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||| ||| ||||| ||| || ||||| | ||||||||||||||||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||||| ||||||||||||||||||||||||| | | ||||
Sbjct: 87 aatgaatctagatc------------tagattcattaacatcaatatgaatatagtaaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaagta 167
| |||||||| ||| | ||||| |||||||||||||
Sbjct: 39 gctagaatgacttata-ttgtggaacggaggaagta 5
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagtat 133
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||||||||| |||||||||||| | |||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 73 ataaatctagata 85
|| ||||||||||
Sbjct: 65 atgaatctagata 77
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||| ||||||||||||||||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattagcattaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||| ||||| ||||||||| ||||| |||||||||||| | |||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/155 (81%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||| ||||||| ||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||||| || |||||||| ||||||||||||||| | |||||
Sbjct: 65 atgaatctagatc------------taaattcattagcatcaatatgaatgtagaaaatg 112
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||| |||||||||||||| ||||
Sbjct: 113 ctagaatgatttaca-ttgtgaaacggagggagta 146
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||| | ||||||||||||| |||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 73 ataaatctagat 84
|| ||| |||||
Sbjct: 86 atgaatttagat 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||| ||| || |||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattagcatcaatataaatatgaaaaatactagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagtatat 170
||||| |||||||
Sbjct: 14 ggagggagtatat 2
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||||||| | | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 73 ataaatctagatagatat 90
|| |||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||| | ||| ||||| |||||||| ||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatatacgtgaaaaatgctagaatgacttaca-ttgtgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||| ||||||||| || ||||||| ||| |||||| |||||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctat 55
Query: 117 atgaatgtgg 126
||||||||||
Sbjct: 54 atgaatgtgg 45
Score = 69.9 bits (35), Expect = 1e-11
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| || ||| ||| | | ||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtggg 127
|| |||||||| | || ||||| | ||| |||||||||||| |||||||| ||||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatggg 119
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 88/102 (86%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 66 gatgttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtg 125
||||||||| |||||||| | |||||| |||||||||||||||||||| | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 126 ggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|| |||| ||||| | || || || ||||||||||||||||
Sbjct: 45 ggtaatgctagaaagtcttgca-ttatgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatc 113
||||||| | ||||||||| |||||| | | |||||||||| ||||||||||||||||
Sbjct: 48 cattcatttagatgttaatgaatctaaacacatatatatgtctagattcattaacatc 105
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/153 (83%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||||||||| ||||||| ||| | ||||| ||| ||| |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 72 aataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
||| ||||||| | |||||| || ||||||||||||||| ||||||||||||| |||
Sbjct: 97 aatgaatctagccacatatat--gtccagattcattaacatctatatgaatgtgggcaat 40
Query: 132 gttagaatgatttacatttgtgaaacggaggaa 164
| |||||||| ||| | || |||||||||||||
Sbjct: 39 gctagaatgacttata-ttatgaaacggaggaa 8
Score = 69.9 bits (35), Expect = 1e-11
Identities = 123/150 (82%), Gaps = 3/150 (2%)
Strand = Plus / Plus
Query: 18 cctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaataaa 77
||||| ||||| ||||||||| ||||||||||| | ||||||||| ||||||||| ||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 78 tctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttaga 137
||| | | |||||| || ||||||||||| ||| ||| ||||||||| ||| ||||
Sbjct: 70 tctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 138 atgatttacatttgtgaaacggaggaagta 167
|||| ||| | |||||||||||||| ||||
Sbjct: 128 atgacttata-ttgtgaaacggagggagta 156
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| |||||||| | |||||||||| |||||||||| ||||| |
Sbjct: 24 cattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatcta 83
Query: 116 tatgaatgtg 125
||||||||||
Sbjct: 84 tatgaatgtg 93
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||| ||| |||||||| | |||||| ||| |||||||||||||||| |
Sbjct: 91 cattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatcta 32
Query: 116 tatgaatgtggg 127
||||||||||||
Sbjct: 31 tatgaatgtggg 20
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| |||||||||| |||| |||||||||||| |||||| |||||||| ||||| |
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttaca-t 120
Query: 150 tgtgaaacggagg 162
|||||||||||||
Sbjct: 121 tgtgaaacggagg 133
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 16 tccctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaata 75
||||||| ||||||||| ||||| |||||||||||| || |||||||||| |||| |||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 76 aatctaga 83
||||||||
Sbjct: 75 aatctaga 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 16 tccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
||||||| ||||||||| ||||| |||||||||||| || |||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaacggagg 10
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaaacggagggagtat 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaaacggagggagta 125
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
|||||||||| |||||||||||||||| |||||| |||||||| ||| | ||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttata-ttgtgaaacg 126
Query: 159 gaggaagta 167
|||||||||
Sbjct: 127 gaggaagta 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| |||||||||||| || |||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 73 ataaatct 80
|| |||||
Sbjct: 75 atgaatct 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
|||||||||| |||||| || ||||| |||||||||||| || |||||||||||||| |
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgct 63
Query: 72 aat 74
|||
Sbjct: 64 aat 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
|||||| |||||||||||||||| |||||| |||||||| ||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 23
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 99 agattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacg 158
||||||||||| |||||| ||||||||||||||| |||||||| ||| | ||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttata-ttgtgaaacg 126
Query: 159 gaggaagta 167
|||||||||
Sbjct: 127 gaggaagta 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||||| ||||||||||||||| |||||||||||| | |||||| |||||| |
Sbjct: 3 actactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatat 62
Query: 71 taat 74
||||
Sbjct: 63 taat 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||||||||| |||||||||||| | |||||| |||||| ||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 72 aataaatct 80
||| |||||
Sbjct: 76 aatgaatct 68
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||||| |||||| |||||||| |||||| |||||||| ||| ||| ||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatatt-gtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 88 tatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttaca 147
|||| |||| |||||| |||||||||||||||||| ||||||||| || ||||| || ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 148 tttgtgaaacggaggaagtat 168
||||||||||||||||||||
Sbjct: 118 -ttgtgaaacggaggaagtat 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| |||| ||| |||||||| | ||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 73 ataaatctaga 83
|||||||||||
Sbjct: 76 ataaatctaga 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 118 tgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||| |||||| | ||||||| |||||||||||||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacatt-gtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||| ||||| ||||||||| ||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtattt 43
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 73 ataaatctagata 85
|| ||||||||||
Sbjct: 65 atgaatctagata 77
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||| | | ||||| |||||||| ||||| |||||||||
Sbjct: 73 tagattcattaacatcaatatgaatatagaaaatgctagaatgacttaca-ttgtgaaac 15
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 14 ggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
|||||||||||||||||||| |||||| |||||||| ||| | ||||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttata-ttgtgaaacggaggaa 135
Query: 165 gtatat 170
||||||
Sbjct: 136 gtatat 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| |||||| |||| |||||||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 73 ata 75
|||
Sbjct: 78 ata 76
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttaga 137
||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tagattcattaacatcaatatgaatgtgggaaatgttaga 35
Score = 73.8 bits (37), Expect = 7e-13
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttaca-ttgtgaaacggaggaagta 137
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatat 90
||||||||||||||||||| |||||||||||||||
Sbjct: 49 cattcatattgatgttaatgaatctagatagatat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/111 (85%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||| | ||||||||| |||||||| | ||| | ||| |||||||||||||||| ||
Sbjct: 112 attcatctagatgttaatgaatctagaca--tatgtgtgtctagattcattaacatctat 55
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||| ||||| || ||||| || ||||||||||||||||
Sbjct: 54 atgaatgtgggcaatgctagaaagacttaca-ttatgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 90/110 (81%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| |||||||||| | ||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaat 122
|| |||||||| | | |||| || |||||||||||||||| | ||||||
Sbjct: 65 atgaatctagacacacatat--gtctagattcattaacatctagatgaat 112
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 79.8 bits (40), Expect = 1e-14
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||||||| |||||||||||||||| | |||||||||| |||| ||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 147 atttgtgaaacggaggaagtatat 170
| ||||||||||||||||||||||
Sbjct: 24 a-ttgtgaaacggaggaagtatat 2
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
||||||||||| ||||||||| |||||||||||||||||| | |||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 60.0 bits (30), Expect = 1e-08
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttaca-ttgtgaaacggagggagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||| ||||| |||||| | ||||| |||||||||||||| ||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttaca-ttgtgaaacggagggagta 125
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtta 64
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
|||||||||| ||||||||||||||| |||||| | ||| | |||||||||||||| |||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttata-ttgtgaaacggagggagt 6
Query: 167 a 167
|
Sbjct: 5 a 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||| |||||||| ||||||| ||||||||||||||||||||
Sbjct: 87 gaaatgctagaatgacttacatt-gtgaaacggaggaagtatat 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||| ||||| ||||||||| ||||| ||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcattt 88
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 5e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| ||||||||||| ||||||||| ||| || |||||| || ||||| ||||| |
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttaca-t 23
Query: 150 tgtgaaacggaggaagtat 168
|||||||||||||||||||
Sbjct: 22 tgtgaaacggaggaagtat 4
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
|||||||||| ||||||||||||||| ||| ||||||||| | ||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||||||||| ||||| || ||||| ||| | |||||||||||||| |||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttata-ttgtgaaacggagggagtat 140
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||| ||||||||| ||| |||| | |||||||| |||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| ||| ||||| | ||||| |||||||||||||| ||||
Sbjct: 109 atgaatgtgggcaatactagaaagtcttaca-ttgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 94/115 (81%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| |||||| ||| | ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtggg 127
|| |||||||| | |||| ||| || ||||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatggg 44
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| |||| |||||||||| || || ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | | ||| |||||| |||||||||||||||| | |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
|| || | ||||| |||||||||||||||||||
Sbjct: 125 ctaaaaagtcttaca-ttgtgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||| | ||||||||| |||||||| | || ||| ||||||||||||||||| || ||
Sbjct: 114 attcatttagatgttaatgaatctagacatatgtatgtgtttagattcattaacgtctat 55
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||| || || | |||| ||||| | ||||| |||||||||||||| ||||
Sbjct: 54 atgtatatgagcaatgctagaaagtcttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 18 cctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaataaa 77
||||| ||||||||||||||| ||| ||||||||| || ||||||||||||| |||| ||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 78 tctagatagatatat 92
|||||| | ||||||
Sbjct: 67 tctagacatatatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||||||| ||||||||||| ||||||||||||| || ||||| || ||||| |||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 147 atttgtgaaacggaggaagt 166
| ||||||||||||||||||
Sbjct: 113 a-ttgtgaaacggaggaagt 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatat 64
||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 77.8 bits (39), Expect = 5e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttaca-ttgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||||||| ||||| |||||||||||| || |||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcat 49
||||||||||||| ||||||||| ||||| | ||||||||
Sbjct: 114 tactactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
|||||||||||||||||| || ||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttaca-ttgtgaaacgga 124
Query: 161 ggaagtatatg 171
|||||||||||
Sbjct: 125 ggaagtatatg 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||||||||| | || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 73 at 74
||
Sbjct: 71 at 70
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttaca-ttgtgaaacggaggaagta 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 93 atgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgt 152
|||| ||||||||||| ||||||||| ||| ||||||||| || ||||| ||||| ||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttaca-ttgt 20
Query: 153 gaaacggaggaagtat 168
| |||||||| |||||
Sbjct: 19 ggaacggagggagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
||||| ||||| ||||||||| |||| |||||||||||| | |||||||||||||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||| ||| |||| || |||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 73 ataaatctaga 83
|| ||||||||
Sbjct: 87 atgaatctaga 77
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||||
Sbjct: 79 tagattcattaacatcaatatgaatgtgagaaatactaaaatgacttaca-ttgtgaaac 137
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 138 ggagggagta 147
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttag 136
|||||||||| ||| ||||||| |||||||||||||||||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatgttag 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttag 136
|||||||||| |||||| |||| |||||||||||||||||||||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatgttag 116
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatat 92
|||||||||||||| ||||||||||||| | ||||||
Sbjct: 103 cattcatattgatgctaataaatctagacatatatat 67
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 104/126 (82%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| | |||||| |||||||||| | || |||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| || ||| | | |||||||||| ||||||||||| |||| ||||||||||||| ||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 133 ttagaa 138
|||||
Sbjct: 125 ctagaa 130
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||| |||| |||||||| | |||||| ||| ||| |||||||||||| |
Sbjct: 115 cattcatatagatgctaatgaatctagacatatatatgtgtataggttcattaacatcta 56
Query: 116 tatgaatgtgggaaatgttagaa 138
||||| |||||| |||| |||||
Sbjct: 55 tatgattgtgggcaatgctagaa 33
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||| |||||||| | |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 73 ataaatctag 82
|| |||||||
Sbjct: 71 atgaatctag 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||||||||||| ||| ||||| |||||||| ||||| |||||||||
Sbjct: 63 tagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttaca-ttgtgaaac 121
Query: 158 ggaggaagtat 168
||||| |||||
Sbjct: 122 ggagggagtat 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 16 tccctccatttcacaatataagttattctagcatttttcgcattcatat 64
||||||| ||||||||||||||| |||||| ||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 84 tagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||| | | ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 47 tagatacattaacatcaatatgaatgtgggaaatgctagaatga 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 35 aagttattctagcatttttcgcattcatattgatgttaataaatctagatagatatat 92
|||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | |||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 73 ataaatctagatagatat 90
|||||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagtat 137
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
||||| |||||||| ||||||||||||| |||||||| ||||| |||||||||||||| |
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggga 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||| ||||| ||||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||| ||||||||| | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 73 at 74
||
Sbjct: 65 at 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
|||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttaca-ttgtgaaacggagg 10
Query: 163 aagta 167
||||
Sbjct: 9 gagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||| ||||| ||||||||| | |||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
|||||||||||||||||||| ||||| || ||| | ||||| |||||||||||||| |||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattaca-ttgtgaaacggagggagt 127
Query: 167 a 167
|
Sbjct: 128 a 128
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||||||||||||||||| |||| || ||||| ||| | |||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttata-ttgtgaaac 120
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 121 ggaggaagta 130
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||| ||| ||||| | |||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 73 ataaatcta 81
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||||||| ||||||||| ||||| ||| | | ||||| | |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||||| |||| | ||||| ||||| |||||||||||||| |||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||||||| ||||||||| ||| ||||| ||||| || ||||| |||||||||
Sbjct: 66 tagattcattaacattaatatgaatatggaaaatgctagaaggacttaca-ttgtgaaac 124
Query: 158 ggaggaagta 167
||||||||||
Sbjct: 125 ggaggaagta 134
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| |||||||||||| | ||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 73 ataaatctagatagatatatatg 95
|| ||||||||| |||||||||
Sbjct: 74 atgaatctagatgaatatatatg 52
Score = 50.1 bits (25), Expect = 1e-05
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 73.8 bits (37), Expect = 7e-13
Identities = 77/89 (86%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagata----gatat--atatgtttagattcattaa 109
||||||||| ||||||||| |||||||||| ||||| || ||| ||||||||||||
Sbjct: 20 cattcatatggatgttaatgaatctagatatatggatattaatgtgtctagattcattaa 79
Query: 110 catcaatatgaatgtgggaaatgttagaa 138
|||| ||||||||||||| ||||||||||
Sbjct: 80 catccatatgaatgtgggcaatgttagaa 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 45 tagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 89 atatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatga 141
|||||||| ||||||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatga 100
Score = 69.9 bits (35), Expect = 1e-11
Identities = 97/120 (80%), Gaps = 12/120 (10%)
Strand = Plus / Minus
Query: 30 aatataagttattctagcatttttcgcattcatattgatgttaataaatctagatagata 89
||||||||| |||||||||||| || |||||||||||||| |||| |||||||| |
Sbjct: 108 aatataagtcattctagcatttctcacattcatattgatgctaatgaatctagaca---- 53
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|| |||||||| |||||||||||||||| |||||| |||||||| |||||||
Sbjct: 52 --------tatattcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 58 ttcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaata 117
||||||| ||||| ||| |||||| | | |||||||||| |||||||||| |||| |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 118 tgaatgtgggaaatgttagaa 138
|||||||||| ||||||||||
Sbjct: 53 tgaatgtgggcaatgttagaa 33
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||| ||| |||||||| | |||||| |||||||||||||| ||||| |
Sbjct: 48 cattcatatatatgtcaatgaatctagacatatatatgtgtttagattcattgacatcta 107
Query: 116 tatgaa 121
||||||
Sbjct: 108 tatgaa 113
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 73.8 bits (37), Expect = 7e-13
Identities = 86/101 (85%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 67 atgttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgg 126
|||||||| |||||| | | ||| ||||||||||||||||||||||| | ||||||||||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 127 gaaatgttagaatgatttacatttgtgaaacggaggaagta 167
| |||| ||||| | ||||| ||||||||| |||| ||||
Sbjct: 44 gtaatgctagaaagtcttaca-ttgtgaaacagagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
||||||||| ||||||||| |||| |||||||||| | ||||||| | |||||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 73 ataaatctagatagatatatatgtttagattcattaacat 112
|| |||||| | | || ||| |||||||||||||||||||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacat 104
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||||||| |||||||| | | ||||||||||||||||||| | ||| |
Sbjct: 48 cattcatatatatgttaatgaatctagacacacatatatgtttagattcattgatatcta 107
Query: 116 tatgaatgtgggaaatg 132
|||||||||||| ||||
Sbjct: 108 tatgaatgtgggcaatg 124
Score = 50.1 bits (25), Expect = 1e-05
Identities = 92/113 (81%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||| | ||| |||||| | | |||| | ||| ||||||||||||||| |
Sbjct: 115 cattcatatagatatcaatgaatctaaacatatatgtgtgtctagattcattaacatata 56
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||| || | ||||| | ||||| || |||||| ||||||||||
Sbjct: 55 tatgaatgtgggcaaggctagaaagtcttaca-ttatgaaaccgaggaagtat 4
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 73.8 bits (37), Expect = 7e-13
Identities = 66/75 (88%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 58 ttcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaata 117
||||||||||| ||||| |||||||||||||||| | |||||||||||| |||||||
Sbjct: 16 ttcatattgatattaatgaatctagatagatataa---tctagattcattaatatcaata 72
Query: 118 tgaatgtgggaaatg 132
|||| ||||||||||
Sbjct: 73 tgaacgtgggaaatg 87
Score = 65.9 bits (33), Expect = 2e-10
Identities = 65/75 (86%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 58 ttcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaata 117
||||||||||| ||||| ||||||||| ||||| | | |||||||||||| |||||||
Sbjct: 76 ttcatattgatattaatgaatctagat---tatatctatctagattcattaatatcaata 20
Query: 118 tgaatgtgggaaatg 132
|||| ||||||||||
Sbjct: 19 tgaacgtgggaaatg 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
|||||| |||||| ||||||||| ||||||||||||| |||| ||||| | ||||| ||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttaca-tt 117
Query: 151 gtgaaacggaggaagta 167
|||||||||||||||||
Sbjct: 118 gtgaaacggaggaagta 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||||| ||||| ||||||||| |||| |||||||||| | ||||||||| |||||
Sbjct: 136 actacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgt 77
Query: 71 taataaatctaga 83
|||||||||||||
Sbjct: 76 taataaatctaga 64
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 73.8 bits (37), Expect = 7e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 102 ttcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggag 161
||||||||||||| ||| ||||||||||||| |||||||| ||| | |||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttaga-ttgtgaaacggag 115
Query: 162 gaagtatat 170
| |||||||
Sbjct: 116 ggagtatat 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttaca-ttgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| |||||||||||| | |||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 73 at 74
||
Sbjct: 61 at 60
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||||||||| ||| |||| |||||||||| | | ||||||||| |||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 73 ataaatctagata 85
|||||||||||||
Sbjct: 65 ataaatctagata 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 62/74 (83%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| ||||||||| |||||||||||| |||| ||||| | ||||| || |||||
Sbjct: 73 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca-ttatgaaat 15
Query: 158 ggaggaagtatatg 171
||||| ||||||||
Sbjct: 14 ggagggagtatatg 1
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 94/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||| | ||||||||| ||| |||| | || || |||||||||||||||||||| |
Sbjct: 48 cattcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatcta 107
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||| ||||| | |||| ||||| | ||||| |||||||||||||||||||
Sbjct: 108 tatgtatgtgagcaatgctagaaagtcttaca-ttgtgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 125/155 (80%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| |||| |||||||||| || ||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| |||||| | | || |||||| || ||||||||||||| | |||||||| || |||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagta 167
||| || | ||||| |||| ||||||||||||||
Sbjct: 38 ttaaaaagtcttaca-ttgtaaaacggaggaagta 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| ||||| ||| ||| ||||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgtc 63
Query: 72 aata 75
||||
Sbjct: 64 aata 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattga 67
|||||||||||||||| ||| ||||| ||||||| ||||||| ||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||| || ||||| ||||| |||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttaca-ttgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 96 tttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaa 155
|||||||||||||| |||||||||||| || |||||| |||||||| ||||| || ||||
Sbjct: 56 tttagattcattaatatcaatatgaatatgagaaatgctagaatgacttaca-ttatgaa 114
Query: 156 acggaggaagta 167
||||||| ||||
Sbjct: 115 acggagggagta 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||| ||| ||||| |||||||||||| || |||||||||||| ||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 72 aataaatcta 81
||| ||||||
Sbjct: 67 aatgaatcta 58
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatatt 65
||||| ||||| ||||||||||||||| ||||||||||||| | |||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||| ||||||| ||||| |||||||| ||| ||| |||||||||||||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||||||| |||| |||||||||| | | ||||||||| ||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 72 aataaatctaga 83
||||||||||||
Sbjct: 81 aataaatctaga 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||| ||||||||| |||||||||||| |||| ||||| | ||||| |||||||||
Sbjct: 72 tagatttattaacatctatatgaatgtggacaatgctagaaagtcttaca-ttgtgaaac 130
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 131 ggagggagta 140
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
|||||||||||||||| ||||| ||||||| |||| ||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgcatgtgggcaatgctagaatgatttacatt 115
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 84 tagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgtta 135
||||||||||||| ||||||||||||||| ||||||||||||| |||||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtgggcaatgtta 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 84 tagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|||| |||||| | ||||||||||||||| ||||||||||||| ||||
Sbjct: 38 tagacatatatatctagattcattaacatatatatgaatgtgggcaatg 86
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
||||||||| ||||| ||| ||||| ||||||| |||| | |||||||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 73 ataaatctagatagatatat 92
||||||||||||| ||||||
Sbjct: 84 ataaatctagatatatatat 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 73 ata 75
|||
Sbjct: 65 ata 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttac 146
|||||||| | |||||| |||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 147 att 149
|||
Sbjct: 125 att 127
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 71.9 bits (36), Expect = 3e-12
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttaca-ttgtgaaacggaggaagta 95
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcattt 51
||||| ||||| ||||||||| ||||| ||||||||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcattt 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||| ||||||||||| ||||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 16 tccctccatttcacaatataagttattctagcatttttcgcattcatattgatgttaata 75
||||||| ||||||||||||||| |||||||||||| || || |||||||| |||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 76 aatcta 81
||||||
Sbjct: 68 aatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||| |||||||| || || |||||| |||||||| ||| | |||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttata-ttgtgaaac 15
Query: 158 ggagg 162
|||||
Sbjct: 14 ggagg 10
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 107 taacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagt 166
||||||||| ||||||||| ||||| || ||||| ||| ||| ||||||||||||||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatatt-gtgaaacggaggaagt 136
Query: 167 a 167
|
Sbjct: 137 a 137
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 71.9 bits (36), Expect = 3e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 92 tatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttg 151
||||| || ||| |||||||||||||||||||||| |||| || ||||| ||||| |||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttaca-ttg 21
Query: 152 tgaaacggaggaagta 167
||||||||||||||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||| ||| ||||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 73 ataaat 78
||||||
Sbjct: 65 ataaat 70
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 71.9 bits (36), Expect = 3e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 104 cattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagga 163
||||||||| ||||| |||||| |||||| |||||||| ||||||| |||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacatt-gtgaaacggagga 9
Query: 164 agta 167
||||
Sbjct: 8 agta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||| ||||| ||||||||| ||||| |||||||||||| || |||| ||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 72 aat 74
|||
Sbjct: 64 aat 66
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||||||||||||| |||||||| ||| | |||||||||||||| |||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggagggagtatat 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||| ||||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 52/57 (91%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 112 tcaatatgaatgtgggaaatgttagaatgatttacatttgtg-aaacggaggaagta 167
||||||||||||||||||||| |||||||| ||| | ||||| ||||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaaacggaggaagta 116
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattga 67
||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 52/56 (92%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 112 tcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagta 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattga 67
||||||| ||||| ||||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 117 tactacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||| ||||||||||||||| ||||||||| ||| | |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
Score = 56.0 bits (28), Expect = 2e-07
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||||||| ||||| |||||||| ||| ||| |||||||||||| |||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatatt-gtgaaacggagggagtatat 2
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| |||||||| ||||||| ||| |||||||| |||||||||||||| |||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||| ||||||||||| ||||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 69.9 bits (35), Expect = 1e-11
Identities = 76/90 (84%), Gaps = 6/90 (6%)
Strand = Plus / Minus
Query: 43 ctagcatttttcgcattcatattgatgttaataaatctagatagatatatatgtttagat 102
||||||||| | ||||||||||||||| ||| |||||||| |||| || |||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagacagat------gtctagat 35
Query: 103 tcattaacatcaatatgaatgtgggaaatg 132
||||| ||||||||||||||||||||||||
Sbjct: 34 tcattgacatcaatatgaatgtgggaaatg 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatg 132
|||||||||| ||||||||||||||||||||||||
Sbjct: 50 tagattcattgacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattgatgttaataaatctaga 83
||||| ||||||||| ||||||||||||| | |||||||| ||||| |||| ||||||||
Sbjct: 16 tttcataatataagtcattctagcattttccacattcatactgatgctaatgaatctaga 75
Query: 84 tag 86
|||
Sbjct: 76 tag 78
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||| ||||||||||| ||||| |||||||| ||| | || ||||||
Sbjct: 73 tagattcattagcatcagtatgaatgtggaaaatgctagaatgacttata-ttatgaaac 15
Query: 158 ggaggaagtatatg 171
|||||||||||||
Sbjct: 14 agaggaagtatatg 1
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 109 acatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||||||||| || ||||| ||||| || ||||||||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttaca-ttatgaaacggagggagta 138
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
||||||||||| ||||| ||| ||||| ||| |||||||| | |||||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||| ||||||||| ||| |||| | |||||||| |||||||||||||||| ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| |||| ||| ||||| | ||||| |||||||||||||| ||||
Sbjct: 109 atgaatatgggcaatactagaaagtcttaca-ttgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||| ||||||||| |||||||| | |||| ||| || ||||||||||||| ||
Sbjct: 114 attcatatagatgttaatgaatctagacatatatgcgtgtctaaattcattaacatctat 55
Query: 117 atgaatgtggg 127
|||||| ||||
Sbjct: 54 atgaatatggg 44
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 1e-11
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||||||||| |||| | ||||| |||||||| ||||| ||||||||||||
Sbjct: 69 attcattaacatcaatatggatgt-gaaaatgctagaatgacttaca-ttgtgaaacgga 12
Query: 161 ggaagta 167
|||||||
Sbjct: 11 ggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||| ||||| ||||||||| ||||| ||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagca-ttttcacatccatattgatgtta 63
Query: 73 at 74
||
Sbjct: 64 at 65
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 17 ccctccatttcacaatataagttattctagcatttt 52
|||||| ||||||||| ||||| |||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcatttt 73
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||||||||||| | |||||| || |||||||||||||| |
Sbjct: 48 cattcatatatatgttaataaatctagacatatatatgtgccaagattcattaacatata 107
Query: 116 tatgaatgtgggaaatgttagaa 138
|||||||||||| |||| |||||
Sbjct: 108 tatgaatgtgggcaatgctagaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||||||| ||||| | | |||||||||| |||||| |||||||| |
Sbjct: 115 cattcatatatatgttaatgaatcttggcacatatatatgtctagatttattaacatata 56
Query: 116 tatgaatgtgggaaatg 132
|||||||||||| ||||
Sbjct: 55 tatgaatgtgggcaatg 39
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 1e-11
Identities = 105/127 (82%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| | |||||| |||||||||| | ||||||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 73 a-taaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaat 131
| | |||||||| | || |||| | |||||||||||||||| ||||||||||||| |||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 132 gttagaa 138
| |||||
Sbjct: 125 gctagaa 131
Score = 69.9 bits (35), Expect = 1e-11
Identities = 105/127 (82%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| | |||||| |||||||||| | ||||||||| |||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 73 ataaatctagatagatatatatgtttagattcatt-aacatcaatatgaatgtgggaaat 131
|| |||||||||| || || ||| |||||| ||| |||||| ||||||||||||| |||
Sbjct: 99 atgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaat 40
Query: 132 gttagaa 138
| |||||
Sbjct: 39 gctagaa 33
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 67.9 bits (34), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| |||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||| ||||||||| ||||| |||||||||||| | | ||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 122 tgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||| |||||||||||||| |||| ||||||||| ||||
Sbjct: 63 tgtgggaaatgctagaatgatttaca-ttgtaaaacggagggagta 107
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||||||||||||| |||||||| |||||||| ||||| || ||||||
Sbjct: 68 tagattcattagcatcaatatgaatatgggaaatactagaatgacttaca-ttatgaaac 126
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 127 ggagggagta 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||| ||||| ||||||| |||| || |||||||||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| ||||| ||| ||||| ||||||| |||| | ||||||||||||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 72 aataaatctaga 83
||| ||||||||
Sbjct: 77 aatgaatctaga 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||| || ||||| |||||| | ||||||| |||||||||||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| |||||||| ||| | |||||||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttata-ttgtgaaacggaggaagta 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatatt 65
|||| ||||| ||||||||||||||| |||||||||||| | ||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||||||| |||||||| ||| | ||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttata-ttgtgaaacgga 12
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatga 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 100 gattcattaacatcaatatgaatgtgggaaatgttagaatga 141
||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 41 ttctagcatttttcgcattcatattgatgttaataaatctagatagatatatatgtttag 100
|||||||||| | | ||||||||| |||||||| |||||||| | ||| | || |||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaa 138
||||||||||||| ||||||||||||| |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| ||||||| | | ||| |||| ||||||||||||||| |
Sbjct: 91 cattcatatagatgttaatgaatctaggcacacatacatgtctagattcattaacatata 32
Query: 116 tatgaatgtgg 126
|||||||||||
Sbjct: 31 tatgaatgtgg 21
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgttta--gattcattaacatc 113
||||||||| ||||||||| |||||| ||| |||| | ||| || ||||||||||||||
Sbjct: 48 cattcatatagatgttaatgaatctatatatatatgtgtgtgtatagattcattaacatc 107
Query: 114 aatatgaatgtgggaaatgttagaa 138
||||||||||||| |||| |||||
Sbjct: 108 tatatgaatgtgggcaatgctagaa 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 105/128 (82%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| | |||||| |||||||||| | ||||||||| |||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 73 ataaatctagatagata--tatatgtttagattcattaacatcaatatgaatgtgggaaa 130
|| |||||| | | | | ||||| | |||||||||||||||| ||||||||||||| ||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 131 tgttagaa 138
|| |||||
Sbjct: 40 tgctagaa 33
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||| |||||||| ||||||| | | ||||||| |||||||||||||||| ||
Sbjct: 25 attcatatatatgttaatgaatctaggcatacatatatgcctagattcattaacatctat 84
Query: 117 atgaatgtgggaaatgttagaa 138
||||||||||| |||| |||||
Sbjct: 85 atgaatgtgggcaatgctagaa 106
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||||||||| ||||||| | |||| |||| ||||||||||||||| |
Sbjct: 91 cattcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaacatata 32
Query: 116 tatgaatgtgggaaatgttagaa 138
||||||| |||| |||| |||||
Sbjct: 31 tatgaatatgggcaatgctagaa 9
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 94 tgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 60 tgtttagattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
|||||||||||||||||||||||| || || || ||||| ||||| || |||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttaca-ttatgaaacggagg 10
Query: 163 aagta 167
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 111 atcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||||||||||||| || |||||||| ||||| ||||||||| |||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttaca-ttgtgaaacagagggagta 123
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||| ||| ||||| ||| ||||| ||| | |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 73 at 74
||
Sbjct: 65 at 66
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgat 68
|||||||||| ||||||||| ||||| ||||||||| || | |||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||||||||||||| ||| | ||| ||||||||||| ||| |||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 73 ataaatctagata 85
|| ||||||||||
Sbjct: 46 atgaatctagata 34
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| |||||||| ||| || ||||| || ||||||||||| ||||||||
Sbjct: 38 tagattcattagtatcaatataaatatgaaaaatgctaaaatgatttaca-ttgtgaaat 96
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 97 ggagggagta 106
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
||||||||||||||| ||||||| | |||||||| || |||| ||||| | ||||| ||
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgt-ggcaatgctagaaagtcttaca-tt 122
Query: 151 gtgaaacggaggaagtatatg 171
|||||||||||||||||||||
Sbjct: 123 gtgaaacggaggaagtatatg 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 149 ttgtgaaacggaggaagtatatg 171
|||||||||||||||||||||||
Sbjct: 23 ttgtgaaacggaggaagtatatg 1
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 94 tgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 60 tgtttagattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
||||||||||||||||||||||| ||||| ||||||| |||| ||||| | ||| | ||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata-tt 119
Query: 151 gtgaaacggaggaagta 167
|||||||||||| ||||
Sbjct: 120 gtgaaacggagggagta 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| |||||||||||||| |||||||||| | ||| ||||| ||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 72 aataaatcta 81
||| ||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
||||||||||||||||||||||| ||||| ||||||| |||| ||||| | ||| | ||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttata-tt 22
Query: 151 gtgaaacggaggaagta 167
|||||||||||| ||||
Sbjct: 21 gtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 12 ctactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtt 71
||||||||||| |||||||||||||| |||||||||| | ||| ||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 72 aataaatcta 81
||| ||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
|||||||||| ||||||||| ||||| ||||||| |||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 110 catcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttaca-ttgtgaaacggagggagtat 4
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
|||||||||||||||| ||||||||| ||||||||||||| | ||| |||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||| ||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 110
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 93/111 (83%), Gaps = 3/111 (2%)
Strand = Plus / Plus
Query: 57 attcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaat 116
|||||||||||||||||| ||||||| || ||| ||| ||||||||||||||| ||
Sbjct: 49 attcatattgatgttaatgaatctaggta--tatgcgtgtctagattcattaacatttat 106
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||| |||| ||||| | ||||| || ||||||||||||||||
Sbjct: 107 atgaatgtggacaatgctagaaagtcttaca-ttatgaaacggaggaagta 156
Score = 54.0 bits (27), Expect = 7e-07
Identities = 127/158 (80%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||| ||| |||| |||||||||| | | ||||||||| |||
Sbjct: 159 tactacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatg 100
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaa 129
||||| |||||||| | ||||| | |||||||||||||||||||||||| | || |
Sbjct: 99 ttaatgaatctagacacgcatatacct--agattcattaacatcaatatgaatataggca 42
Query: 130 atgttagaatgatttacatttgtgaaacggaggaagta 167
||| ||||| | ||||| || ||||||||||| ||||
Sbjct: 41 atgctagaaagtcttaca-ttatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||| |||||||||||||||||||| |||| ||||||| ||||||||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaa 106
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 63.9 bits (32), Expect = 7e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 103 tcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggagg 162
||||| |||||||||| |||||| |||||| |||||||| ||| ||| || |||||||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatatt-gtaaaacggagg 88
Query: 163 aagtatat 170
||||||||
Sbjct: 89 aagtatat 96
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgt 70
|||| ||||| ||| ||||||||||| |||||||||||| || |||| ||||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgt 36
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||||||||| ||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||| ||||||||||||| |||||||| ||||| |||||||||||||| |||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 103 aatgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagtat 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcattt 111
Score = 50.1 bits (25), Expect = 1e-05
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 115 atatgaatgtgggaaatgttagaatgatttacatttgtgaaacgg 159
|||| ||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttaca-ttgtgaaacgg 98
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 24 tttcacaatataagttattctagcatttttcgcattcatattgatgttaataaatctaga 83
||||||||||||||| ||| ||||||||||| ||| | ||| |||||||| ||||||||
Sbjct: 16 tttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatctaga 75
Query: 84 tagatat 90
||||||
Sbjct: 76 cagatat 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 17 ccctccatttcacaatataagttattctagcatttttcgcattcatat 64
|||||| ||||||||||||||| ||| || |||||||| |||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 44.1 bits (22), Expect = 6e-04
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 89 atatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
|||| ||| ||||||||||||||| ||| | ||| || ||||| || ||||| ||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 149 ttgtgaaacggaggaagtatat 170
| |||||||||| |||||||||
Sbjct: 22 t-gtgaaacggaagaagtatat 2
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| ||| |||| ||||||| | | |||||||| |||||||||| |||| |
Sbjct: 27 cattcatatctatgctaatgaatctaggcacacatatatgtctagattcatttgcatcta 86
Query: 116 tatgaatgtgggaaatgttagaa 138
|||||||||||| ||||||||||
Sbjct: 87 tatgaatgtgggcaatgttagaa 109
Score = 46.1 bits (23), Expect = 2e-04
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgtttagattcattaacatcaa 115
||||||||| |||| ||| |||||||| | |||| | || ||||||||||| ||| |
Sbjct: 94 cattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcataga 35
Query: 116 tatgaatgtgggaaatgttagaa 138
|||||||||||| |||| |||||
Sbjct: 34 tatgaatgtgggcaatgctagaa 12
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||||||||| ||||||| |||| || ||| ||||| ||
Sbjct: 142 tactacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattg 83
Query: 70 ttaataaatctaga 83
||||| ||||||||
Sbjct: 82 ttaatgaatctaga 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 116 tatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||||||||| |||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacatt-gtgaaacggaggaagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 90 tatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatt 149
||||||| |||||||||||||| ||||| ||| | ||||| |||||||| ||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 150 tgtgaaacggaggaagta 167
|||||||||||||||||
Sbjct: 123 -gtgaaacggaggaagta 139
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 60.0 bits (30), Expect = 1e-08
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttaca-ttgtgaaacggaggaagta 109
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 73/86 (84%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 84 tagatatatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatt 143
||||| |||||||||||||||||||||||| || | ||||||| |||| ||||| |
Sbjct: 87 tagatgtatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatct 28
Query: 144 tacatttgtgaaacggaggaagtata 169
|||| |||||||||||||| ||||||
Sbjct: 27 taca-ttgtgaaacggagggagtata 3
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 1e-08
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtatat 170
|||||||||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttaca-ttgtggaacggaggaagtatat 2
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 93 atgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 138
|||| |||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 60.0 bits (30), Expect = 1e-08
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 91 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacattt 150
|||||| |||||||||||||||| | ||||||||||| || | || || | ||||| ||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttaca-tt 22
Query: 151 gtgaaacggaggaagtat 168
||||||||||||||||||
Sbjct: 21 gtgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 1e-08
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||||||||||| ||||||||||||| |||| ||||| | ||||| || ||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttaca-ttatgaaac 130
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 131 ggagggagta 140
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||||||||||| |||| || || | |||||| || |||||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgctaaaaagttttaca-ttatgaaacgga 135
Query: 161 ggaagtata 169
|| ||||||
Sbjct: 136 gggagtata 144
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||||||| ||||| ||| |||||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 73 a 73
|
Sbjct: 65 a 65
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 106 ttaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaag 165
||||||||||||| ||| || |||||| || ||||| ||| ||| |||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatatt-gtgaaacggaggaag 120
Query: 166 tatat 170
|||||
Sbjct: 121 tatat 125
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||| ||||| ||||||||||||||| ||| |||||||| || ||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 73 a 73
|
Sbjct: 62 a 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 106 ttaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaag 165
||||||||||||| ||| || |||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttaca-ttgtgaaacggagggag 7
Query: 166 ta 167
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacgga 160
||||||||||||| ||||||||||||| |||| ||||| | ||||| || |||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttaca-ttatgaaacgga 12
Query: 161 ggaagtata 169
|| ||||||
Sbjct: 11 gggagtata 3
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 101 attcattaacatcaatatgaatgtgggaaatgttagaatga 141
|||||||| ||||||||||||||||||||||| || |||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatga 89
Score = 54.0 bits (27), Expect = 7e-07
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||||| |||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacatt-gtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcat 62
|||||||||| ||||||||| ||| | |||||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttt 52
|||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcatttt 77
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 10 tactactccctccatttcacaatataagttattctagcatttt 52
||||||||||||| ||||||||| |||| |||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgcaagtcattctagcatttt 44
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 120 aatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| ||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacatt-gtgaaacggagggagta 116
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 112 tcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| || |||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacatt-gtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 actactccctccatttcacaatataagttattctagcatt 50
|||||| | ||| ||||||||||||||| |||||||||||
Sbjct: 106 actacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 87 atatatatgtttagattcattaacatcaatatgaatgtgg 126
||||| |||| |||||||||||||||| ||||||||||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtgg 92
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttt 52
|||||||||| ||||| ||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcatttt 44
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 54.0 bits (27), Expect = 7e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| |||||||| ||||| |||||||||||||| ||||
Sbjct: 50 atgtgggaaatgctagaatgacttaca-ttgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcattt 51
|||||||||| ||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 129 aatgttagaatgatttacatttgtgaaacggaggaagtat 168
|||| |||||||||||||| |||||||||||||| |||||
Sbjct: 58 aatgctagaatgatttaca-ttgtgaaacggagggagtat 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatt 50
|||||||||| ||||||||| ||| | |||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 54.0 bits (27), Expect = 7e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 92 tatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttg 151
||||| || |||||||| ||| ||||||||||||| |||| ||||| | ||||| |||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttaca-ttg 110
Query: 152 tgaaacggaggaagtatat 170
||||||||| |||||||||
Sbjct: 111 tgaaacggatgaagtatat 129
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 122 tgtgggaaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| ||||| |||||||| ||||||| ||||||||||||||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacatt-gtgaaacggaggaagtat 109
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttt 52
|||| ||||| ||||||||| ||||| |||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcatttt 69
Score = 46.1 bits (23), Expect = 2e-04
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 117 atgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
||||||| |||||||| || ||||| ||||||| |||||||||||| ||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacatt-gtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| | |||||| |||||||||| | | |||||| || |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 73 ataaatctaga 83
|||||||||||
Sbjct: 65 ataaatctaga 75
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 7e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 89 atatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacat 148
||||| || |||||||||||| ||| ||||| || |||| ||| ||||||||| |||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttaca- 24
Query: 149 ttgtgaaacggaggaagta 167
|| ||||||||||| ||||
Sbjct: 23 ttatgaaacggagggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 54.0 bits (27), Expect = 7e-07
Identities = 88/107 (82%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 61 atattgatgttaataaatctagatagatatatatgtttagattcattaacatcaatatga 120
|||| ||||||||| |||||||| | ||| |||| | |||||||||||| ||| | || |
Sbjct: 51 atatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaataa 110
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||| |||| || || | ||||| |||||||||||||||||||
Sbjct: 111 atgtggacaatgctaaaaagtcttaca-ttgtgaaacggaggaagta 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 88/109 (80%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcatttttcgcattcatattgatg 69
||||||| ||||| ||||||||| |||| || ||||||| | | |||| || | |||
Sbjct: 159 tactacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagata 100
Query: 70 ttaataaatctagatagatatatatgtttagattcattaacatcaatat 118
||||| |||||||||| || ||| | | |||||||||||||||| ||||
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacatctatat 51
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 54.0 bits (27), Expect = 7e-07
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgttta--gattcattaacatc 113
||||||||| ||||||||| |||||| | | | |||| ||| || ||||||||||||||
Sbjct: 117 cattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaacatc 58
Query: 114 aatatgaatgtggg 127
|||||||||||||
Sbjct: 57 tatatgaatgtggg 44
Score = 54.0 bits (27), Expect = 7e-07
Identities = 63/74 (85%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 56 cattcatattgatgttaataaatctagatagatatatatgttta--gattcattaacatc 113
||||||||| ||||||||| |||||| | | | |||| ||| || ||||||||||||||
Sbjct: 48 cattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaacatc 107
Query: 114 aatatgaatgtggg 127
|||||||||||||
Sbjct: 108 tatatgaatgtggg 121
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 3e-06
Identities = 57/66 (86%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 105 attaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaa 164
||||| |||||||| |||||| |||| |||||||| || |||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcatt-gtgaaacggaggaa 105
Query: 165 gtatat 170
||||||
Sbjct: 106 gtatat 111
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||||||||| || ||| | ||||||| |||||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacatt-gtgaaacggaggaagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 114 aatatgaatgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| ||||| || ||| | ||||||| |||||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacatt-gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 126/158 (79%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttcgcattcatattgatgtta 72
|||||||||| ||||| ||| |||| |||||||||| | ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 73 ataaatctagatagatatatatgtttagattcattaacatcaatatgaatgtgggaaatg 132
|| ||||||| | | |||||||| ||||||||||| ||| |||| |||||||| || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 133 ttagaatgatttacatttgtgaaacggaggaagtatat 170
||||| | ||||| || |||||| ||||||||||||
Sbjct: 38 ctagaaagtcttaca-ttatgaaacagaggaagtatat 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
||||||||||| ||| ||||||||||||| |||| ||||| | ||||| || ||||||
Sbjct: 90 tagattcattagcatatatatgaatgtgggcaatgctagaaagtcttaca-ttatgaaac 148
Query: 158 ggaggaagta 167
||||| ||||
Sbjct: 149 ggagggagta 158
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 94 tgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtg 153
|||||| ||||||||||||| ||||| || || | |||| || |||| ||||||| |||
Sbjct: 65 tgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt-gtg 123
Query: 154 aaacggaggaagta 167
||||||||||||||
Sbjct: 124 aaacggaggaagta 137
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 10 tactactccctccatttcacaatataagttattctagcattt 51
||||||||||||| ||||| ||| ||||| ||||||||||||
Sbjct: 131 tactactccctccgtttcataatgtaagtcattctagcattt 90
Score = 46.1 bits (23), Expect = 2e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 121 atgtgggaaatgttagaatgatttacatttgtgaaacggaggaagta 167
|||||||||||| |||||||| ||||| || ||||||||||| ||||
Sbjct: 83 atgtgggaaatgctagaatgacttaca-ttatgaaacggagggagta 128
Score = 44.1 bits (22), Expect = 6e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 98 tagattcattaacatcaatatgaatgtgggaaatgttagaatgatttacatttgtgaaac 157
|||||||| ||| || |||| |||||| ||||||||||||||| ||| | || ||||||
Sbjct: 73 tagattcactaatttccatataaatgtgagaaatgttagaatgacttata-ttatgaaac 15
Query: 158 ggaggaagta 167
| ||||||||
Sbjct: 14 gaaggaagta 5
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 13 tactccctccatttcacaatataagttattctagcatttttc 54
|||||||| | ||||||||||||||| ||||||| |||||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttc 46
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 13 tactccctccatttcacaatataagttattctagcatttttc 54
|||||||||| ||||||||| ||| | |||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttc 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 128 aaatgttagaatgatttacatttgtgaaacggaggaagtat 168
||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 66 aaatgctagaatgatttaca-ttgtgaaacggagggagtat 105
