miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40173_ath-MIR848:mirbase
Length = 195
Score = 387 bits (195), Expect = e-108
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1 aaaactttcagattgcacaagagaatatgaaaaagtattaacacaagccttatagcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaactttcagattgcacaagagaatatgaaaaagtattaacacaagccttatagcttgg 60
Query: 61 caatctcatgtcaaataaggaaaagaagaggaacccaaggtatgtttctcatctaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caatctcatgtcaaataaggaaaagaagaggaacccaaggtatgtttctcatctaccttc 120
Query: 121 tttgacatgggactgcctaagctaaaggcttgccatgttatcacatccttctttcatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgacatgggactgcctaagctaaaggcttgccatgttatcacatccttctttcatttc 180
Query: 181 gtcgcaaccacttta 195
|||||||||||||||
Sbjct: 181 gtcgcaaccacttta 195
>39930_aly-MIR848:mirbase
Length = 118
Score = 135 bits (68), Expect = 1e-32
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 51 tatagcttggcaatctcatgtcaaataaggaaaagaagaggaacccaaggtatgtttctc 110
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 25 tatagcttggcaatcccatgtcaaataaggcaaagaagaggaacccaaggtatgtttctc 84
Query: 111 atctaccttctttgacatgggact 134
|| | |||||||||||||||||||
Sbjct: 85 atttgccttctttgacatgggact 108
