miRNEST 2.0, an integrative microRNA resource :: BLAST
>49008_osa-miR445a:pmrd
Length = 268
Score = 256 bits (129), Expect = 9e-69
Identities = 226/257 (87%), Gaps = 1/257 (0%)
Strand = Plus / Plus
Query: 18 tcacatcggatgtttgacgttaatttagagtattaaacatagactaatttaaaaattaat 77
|||||| | ||||||||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 1 tcacattgaatgtttgacactaatttggagtattaaacatagactaataaaaaaactaat 60
Query: 78 ttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataattat 137
||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 61 ttcataaatgaaagctaatctgcgagacgaattttttaagcctaattaatccataattat 120
Query: 138 taaaagtttactatagcatcatattgtcaaagtcatgttgtaattagacttaaaagattt 197
||||||||||| |||||||| ||||||||| ||||| |||||||||||| ||||||||
Sbjct: 121 gaaaagtttactgtagcatcacattgtcaaa-tcatggtgtaattagactcaaaagattc 179
Query: 198 gtctcgcgaattagtctaaacttatgaaatgggttttgtaattaatggatgtttaatatt 257
|||||||||||||||| || |||| ||| |||||| |||||| || |||||||||| |
Sbjct: 180 gtctcgcgaattagtccaaggttatagaataggttttataattagtgtatgtttaatact 239
Query: 258 ttaaattagtgtttaaa 274
||||||||||| ||||
Sbjct: 240 ctaaattagtgtataaa 256
Score = 52.0 bits (26), Expect = 3e-07
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 18 tcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 268 tcacatcggatgtttatacactaatttagagtattaaacatacactaatt 219
>49012_osa-miR445e:pmrd
Length = 265
Score = 182 bits (92), Expect = 1e-46
Identities = 214/259 (82%), Gaps = 18/259 (6%)
Strand = Plus / Plus
Query: 16 tgtcacatcggatgtttgacgttaatttagagtattaaacatagactaatttaaaaatta 75
|||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct: 6 tgtcacatcgaatgtttgacgctaatttggagtattaaacatagactaataaaaaaacta 65
Query: 76 atttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataatt 135
||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 66 atttcataaatgaaagctaatctgcgagacgaattttttaagcctaattaatccataatt 125
Query: 136 attaaaagtttactatagcatcatattgtcaaagtcatgttgtaattagacttaaaagat 195
|| ||||||||||| | ||||| |||||||||||| |||||||
Sbjct: 126 atgaaaagtttact------------------aatcatggtgtaattagactcaaaagat 167
Query: 196 ttgtctcgcgaattagtctaaacttatgaaatgggttttgtaattaatggatgtttaata 255
| |||||||||||||||| || |||| ||| |||||| |||||| || ||||||||||
Sbjct: 168 tcgtctcgcgaattagtccaaggttatagaataggttttataattagtgtatgtttaata 227
Query: 256 ttttaaattagtgtttaaa 274
| ||||||||||| ||||
Sbjct: 228 ctctaaattagtgtataaa 246
Score = 56.0 bits (28), Expect = 2e-08
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 16 tgtcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 260 tgtcacatcggatgtttatacactaatttagagtattaaacatacactaatt 209
>49009_osa-miR445b:pmrd
Length = 264
Score = 182 bits (92), Expect = 1e-46
Identities = 215/259 (83%), Gaps = 19/259 (7%)
Strand = Plus / Plus
Query: 16 tgtcacatcggatgtttgacgttaatttagagtattaaacatagactaatttaaaaatta 75
|||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||
Sbjct: 6 tgtcacatcgaatgtttgacgctaatttagagtattaaacatagactaata-aaaaacta 64
Query: 76 atttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataatt 135
||||||||||||| |||| ||||| ||| |||| ||||||||||||||||||||||||||
Sbjct: 65 atttcataaatgaaagctaatctgcgagacgaactttttaagcctaattaatccataatt 124
Query: 136 attaaaagtttactatagcatcatattgtcaaagtcatgttgtaattagacttaaaagat 195
|| ||||||||||| | ||||| |||||||||||| |||||||
Sbjct: 125 atgaaaagtttact------------------aatcatggtgtaattagactcaaaagat 166
Query: 196 ttgtctcgcgaattagtctaaacttatgaaatgggttttgtaattaatggatgtttaata 255
| |||||||||||||||| || |||| ||| |||||| ||||||||| ||||||||||
Sbjct: 167 tcgtctcgcgaattagtccaaggttatagaataggttttataattaatgtatgtttaata 226
Query: 256 ttttaaattagtgtttaaa 274
| ||||||||||| ||||
Sbjct: 227 ctctaaattagtgtataaa 245
Score = 48.1 bits (24), Expect = 4e-06
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Minus
Query: 16 tgtcacatcggatgtttg-acgttaatttagagtattaaacata 58
||||||||||||||||| || |||||||||||||||||||||
Sbjct: 259 tgtcacatcggatgtttatacactaatttagagtattaaacata 216
>49014_osa-miR445g:pmrd
Length = 275
Score = 180 bits (91), Expect = 4e-46
Identities = 124/135 (91%)
Strand = Plus / Plus
Query: 16 tgtcacatcggatgtttgacgttaatttagagtattaaacatagactaatttaaaaatta 75
|||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct: 11 tgtcacatcgaatgtttgacgctaatttggagtattaaacatagactaataaaaaaacta 70
Query: 76 atttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataatt 135
||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 71 atttcataaatgaaagctaatctgcgagacgaattttttaagcctaattaatccataatt 130
Query: 136 attaaaagtttacta 150
|| ||||||||||||
Sbjct: 131 atgaaaagtttacta 145
Score = 48.1 bits (24), Expect = 4e-06
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 16 tgtcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||||| || ||||||||| ||||||||||| |||||||
Sbjct: 265 tgtcacatcggatgtttatacactaatttagaatattaaacatacactaatt 214
>49013_osa-miR445f:pmrd
Length = 305
Score = 180 bits (91), Expect = 4e-46
Identities = 225/274 (82%), Gaps = 18/274 (6%)
Strand = Plus / Plus
Query: 1 aaacttgttagtctatgtcacatcggatgtttgacgttaatttagagtattaaacataga 60
|||||| |||||| |||||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 12 aaactttttagtccgtgtcacatcgaatgtttgacgctaatttggagtattaaacataga 71
Query: 61 ctaatttaaaaattaatttcataaatgagagcttatctgtgaggcgaattttttaagcct 120
||||| ||||| ||||||||||||||| |||| ||||| | | ||||||||||||||||
Sbjct: 72 ctaataaaaaaactaatttcataaatgaaagctaatctgcgggacgaattttttaagcct 131
Query: 121 aattaatccataattattaaaagtttactatagcatcatattgtcaaagtcatgttgtaa 180
||||||||||||||||| ||||||||||| | ||||| |||||
Sbjct: 132 aattaatccataattatgaaaagtttact------------------aatcatggtgtaa 173
Query: 181 ttagacttaaaagatttgtctcgcgaattagtctaaacttatgaaatgggttttgtaatt 240
||||||| |||||||| |||||||||||||||| || |||| ||| |||||| |||||
Sbjct: 174 ttagactcaaaagattcgtctcgcgaattagtccaaggttatagaataggttttataatt 233
Query: 241 aatggatgtttaatattttaaattagtgtttaaa 274
| || |||||||||| | ||||||||||| ||||
Sbjct: 234 agtgtatgtttaatactctaaattagtgtataaa 267
Score = 56.0 bits (28), Expect = 2e-08
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 16 tgtcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 281 tgtcacatcggatgtttatacactaatttagagtattaaacatacactaatt 230
>49010_osa-miR445c:pmrd
Length = 260
Score = 180 bits (91), Expect = 4e-46
Identities = 124/135 (91%)
Strand = Plus / Plus
Query: 16 tgtcacatcggatgtttgacgttaatttagagtattaaacatagactaatttaaaaatta 75
|||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct: 4 tgtcacatcgaatgtttgacgctaatttggagtattaaacatagactaataaaaaaacta 63
Query: 76 atttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataatt 135
||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 64 atttcataaatgaaagctaatctgcgagacgaattttttaagcctaattaatccataatt 123
Query: 136 attaaaagtttacta 150
|| ||||||||||||
Sbjct: 124 atgaaaagtttacta 138
Score = 52.0 bits (26), Expect = 3e-07
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 14 tatgtcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||||||| || ||||||||||||||||| ||| |||||||
Sbjct: 260 tatgtcacatcggatgtttatacactaatttagagtattaaatatacactaatt 207
>49015_osa-miR445h:pmrd
Length = 277
Score = 167 bits (84), Expect = 6e-42
Identities = 212/259 (81%), Gaps = 18/259 (6%)
Strand = Plus / Plus
Query: 16 tgtcacatcggatgtttgacgttaatttagagtattaaacatagactaatttaaaaatta 75
|||||||| | ||||||||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct: 12 tgtcacattgaatgtttgacactaatttggagtattaaacatagactaataaaaaaacta 71
Query: 76 atttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataatt 135
||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 72 atttcataaatgaaagctaatctgcgagacgaattttttaagcctaattaatccataatt 131
Query: 136 attaaaagtttactatagcatcatattgtcaaagtcatgttgtaattagacttaaaagat 195
|| ||||||||||| | ||||| |||||||||||| |||||||
Sbjct: 132 atgaaaagtttact------------------aatcatggtgtaattagactcaaaagat 173
Query: 196 ttgtctcgcgaattagtctaaacttatgaaatgggttttgtaattaatggatgtttaata 255
| |||||||||||||||| || |||| ||| |||||| |||||| || ||||||||||
Sbjct: 174 tcgtctcgcgaattagtccaaggttatagaataggttttataattagtgtatgtttaata 233
Query: 256 ttttaaattagtgtttaaa 274
| ||||||||||| ||||
Sbjct: 234 ctctaaattagtgtataaa 252
Score = 56.0 bits (28), Expect = 2e-08
Identities = 47/52 (90%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 16 tgtcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||||| || ||||||||||||||||||||| |||||||
Sbjct: 266 tgtcacatcggatgtttatacactaatttagagtattaaacatacactaatt 215
>49016_osa-miR445i:pmrd
Length = 244
Score = 147 bits (74), Expect = 6e-36
Identities = 120/134 (89%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 3 acttgttagtctatgtcacatcggatgtttgacgttaatttagagtattaaacatagact 62
|||| |||||| |||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 1 actttttagtccgtgtcacatcgaatgtttgacgctaatttagagtattaaatatagact 60
Query: 63 aatttaaaaattaatttcataaatgagagcttatctgtgaggcgaattttttaagcctaa 122
||| ||||| ||||||||||||||| |||| ||||||||| ||| |||||||||||||
Sbjct: 61 aataaaaaaactaatttcataaatgaaagctaatctgtgagatgaa-tttttaagcctaa 119
Query: 123 ttaatccataatta 136
||||||||||||||
Sbjct: 120 ttaatccataatta 133
Score = 79.8 bits (40), Expect = 1e-15
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 187 ttaaaagatttgtctcgcgaattagtctaaacttatgaaatgggttttgtaattaatgga 246
|||||||||| |||||||||||||||| || |||| ||| |||||| |||||| || |
Sbjct: 131 ttaaaagattcgtctcgcgaattagtccaaggttatagaataggttttataattagtgta 190
Query: 247 tgtttaatattttaaattagtgtttaaa 274
||||||||| ||||||||||||| ||||
Sbjct: 191 tgtttaatactttaaattagtgtataaa 218
Score = 48.1 bits (24), Expect = 4e-06
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 16 tgtcacatcggatgtttg-acgttaatttagagtattaaacatagactaatt 66
||||||||||||||||| || ||||||| ||||||||||||| |||||||
Sbjct: 232 tgtcacatcggatgtttatacactaatttaaagtattaaacatacactaatt 181
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 71.9 bits (36), Expect = 3e-13
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 105 cgaattttttaagcctaattaatccataattattaaaagtttactatagcatcatattgt 164
||||||| ||||||||||||||||||| |||| ||| ||||||| ||||| || |||||
Sbjct: 118 cgaatttattaagcctaattaatccatcattagcaaatgtttactttagcaccacattgt 59
Query: 165 caaagtcatgttgtaattagacttaaaagatttgtctcgc 204
|||| | ||| || |||||| |||||||||| |||||||
Sbjct: 58 caaa-ttatggtgcaattaggcttaaaagatccgtctcgc 20
>49011_osa-miR445d:pmrd
Length = 312
Score = 71.9 bits (36), Expect = 3e-13
Identities = 157/196 (80%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 74 taatttcataaatgagagcttatctgtgaggcgaattttttaagcctaattaatccataa 133
||||| |||||||||||||| || ||||| | || ||||||||||||||||||||||||
Sbjct: 232 taattgcataaatgagagctaattcgtgagacaaaatttttaagcctaattaatccataa 173
Query: 134 ttattaaaagtttactatagcatcatattgtcaaagtcatgttgtaattagacttaaaag 193
||| | | ||||| | |||||||| || | | || |||| |||||||||| || ||
Sbjct: 172 ttaacacatgtttagtgtagcatcacataggctaa-tcattgattaattagactcaatag 114
Query: 194 atttgtctcgcgaattagtctaaacttatgaaatgggttttgtaattaatggatgtttaa 253
||| |||||||||||| || | ||||| |||||| ||||| |||| | ||||||||
Sbjct: 113 attcatctcgcgaattaatccagggttatggaatggggtttgtcattagtctatgtttaa 54
Query: 254 tattttaaattagtgt 269
|| ||| |||||||||
Sbjct: 53 tacttttaattagtgt 38
Score = 46.1 bits (23), Expect = 2e-05
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 16 tgtcacatcggatgtt-tgacgttaatttagagtattaaacatagactaat 65
||||||||| |||||| |||| ||||| | ||||||||||||||||||||
Sbjct: 19 tgtcacatcagatgttatgacactaattaaaagtattaaacatagactaat 69
>49004_osa-miR442:pmrd
Length = 233
Score = 63.9 bits (32), Expect = 7e-11
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 105 cgaattttttaagcctaattaatccataattattaaaagtttactatagcatcatattgt 164
||||||| ||||||||||||||||| | |||| ||| ||||||| ||||| || |||||
Sbjct: 163 cgaatttattaagcctaattaatccgtcattagcaaatgtttactgtagcaccacattgt 104
Query: 165 caaagtcatgttgtaattagacttaaaagatttgtctcgc 204
|| | ||||| | |||||| ||||||||||| |||||||
Sbjct: 103 caga-tcatggagcaattaggcttaaaagattcgtctcgc 65
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 178 taattagacttaaaagatttgtctcgcgaattagtc 213
||||||| || || ||||||||||||||||||||||
Sbjct: 37 taattaggctcaatagatttgtctcgcgaattagtc 2
Score = 44.1 bits (22), Expect = 6e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 178 taattagacttaaaagatttgtctcgcgaattag 211
||||||| ||||||| ||||||||||||||||||
Sbjct: 100 taattaggcttaaaa-atttgtctcgcgaattag 132
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 178 taattagacttaaaagatttgtctcg 203
|||||||||| |||||||||||||||
Sbjct: 28 taattagactcaaaagatttgtctcg 3
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 178 taattagacttaaaagatttgtctcgcga 206
||||||| || ||||||||||||||||||
Sbjct: 91 taattaggctcaaaagatttgtctcgcga 119
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 178 taattagacttaaaagatttgtctcgcga 206
||||||| ||||||||||| |||||||||
Sbjct: 90 taattaggcttaaaagattcgtctcgcga 118
>49994_osa-miRf10779-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 aaacttgttagtctatgtcacatcggatgtttg 33
|||||| ||| || |||||||||||||||||||
Sbjct: 66 aaactttttaatccatgtcacatcggatgtttg 98
>49652_osa-miRf10437-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 178 taattagacttaaaagatttgtctcgcga 206
||||||| || ||||||||||||||||||
Sbjct: 34 taattaggctcaaaagatttgtctcgcga 6
