miRNEST 2.0, an integrative microRNA resource :: BLAST
>48799_oru-miR806:pmrd
Length = 242
Score = 299 bits (151), Expect = 6e-82
Identities = 222/242 (91%), Gaps = 4/242 (1%)
Strand = Plus / Minus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 242 atactacctccttccctaaatatttgacgccgttgatatttttaaacatgtttgaccgtt 183
Query: 71 catcttattgaaaactttt-gtgaaacatataaaactatatgtatacataaaagtatatt 129
| ||||||| |||| |||| |||||| ||||||||||||||||||| |||||||||||||
Sbjct: 182 cgtcttattcaaaaatttttgtgaaatatataaaactatatgtatatataaaagtatatt 123
Query: 130 taacaatgaatcaaatgataggaaaagaattaataattacttaaaattttt--aataaga 187
||||||| ||||||||||||||||| |||||| |||||||||||| ||||| |||||||
Sbjct: 122 taacaataaatcaaatgataggaaaggaattattaattacttaaatttttttgaataaga 63
Query: 188 cgaacggtcaaatatatttaaaaaagtcaacggcat-acatatttagggatggagggagt 246
|||||||||||||||||||||||||||||||||| | | |||||| ||||||||||||||
Sbjct: 62 cgaacggtcaaatatatttaaaaaagtcaacggcgtcaaatattttgggatggagggagt 3
Query: 247 at 248
||
Sbjct: 2 at 1
Score = 99.6 bits (50), Expect = 1e-21
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 atactccctccatcccaaaatatttgacgccgttgacttttttaaatatatttgaccgtt 60
Query: 71 catcttattgaaaa 84
| ||||||| ||||
Sbjct: 61 cgtcttattcaaaa 74
Score = 61.9 bits (31), Expect = 2e-10
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 172 aaaattttt-aataagacgaacggtcaaatatatttaaaaaagtcaacggcat-acatat 229
||||||||| ||||||||||||||||||| || |||||||| |||||||| | | ||||
Sbjct: 164 aaaatttttgaataagacgaacggtcaaacatgtttaaaaatatcaacggcgtcaaatat 223
Query: 230 ttagggatggagggagtat 248
||||||| ||||| |||||
Sbjct: 224 ttagggaaggaggtagtat 242
>49031_osa-miR806h:pmrd
Length = 271
Score = 214 bits (108), Expect = 3e-56
Identities = 188/212 (88%), Gaps = 2/212 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgttc 71
|||||||||||| |||||| |||||| ||||||||||||| |||||||||||| |||
Sbjct: 252 tactccctccgtttctaaatgtttgacaccgttgactttttagcacatgtttgaccattc 193
Query: 72 atcttattgaaaa-cttttgtgaaacatataaaactatatgtatacataaaagtatattt 130
||||||| |||| ||||||||| | || ||||| |||||| ||||||||| |||||||
Sbjct: 192 gtcttattcaaaaacttttgtgagatatgtaaaattatatgcctacataaaaatatattt 133
Query: 131 aacaatgaatcaaatgataggaaaagaattaataattacttaaaattttt-aataagacg 189
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 132 aacaatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacg 73
Query: 190 aacggtcaaatatatttaaaaaagtcaacggc 221
|||||||||| |||| ||||||||||||||
Sbjct: 72 aacggtcaaacatatgataaaaagtcaacggc 41
Score = 58.0 bits (29), Expect = 3e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgttc 71
|||||||||||| | |||| ||| |||||||||||||||| | ||||||||||||||
Sbjct: 14 tactccctccgtttcgaaatgtttaacgccgttgactttttatcatatgtttgaccgttc 73
Query: 72 atcttattgaaaa 84
||||||| ||||
Sbjct: 74 gtcttattcaaaa 86
>49028_osa-miR806e:pmrd
Length = 255
Score = 204 bits (103), Expect = 2e-53
Identities = 186/211 (88%), Gaps = 2/211 (0%)
Strand = Plus / Minus
Query: 13 actccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgttca 72
||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 246 actccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgaccgttcg 187
Query: 73 tcttattgaaaa-cttttgtgaaacatataaaactatatgtatacataaaagtatattta 131
||||||| |||| ||||||||||| || ||||| |||||| ||||||||| ||||||||
Sbjct: 186 tcttatttaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatattta 127
Query: 132 acaatgaatcaaatgataggaaaagaattaataattacttaaaattttt-aataagacga 190
||||| ||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 126 acaataaattaaatgataagaaaagaattaataattacttaaattttttgaataagacga 67
Query: 191 acggtcaaatatatttaaaaaagtcaacggc 221
||||||||| |||| ||||||||||||||
Sbjct: 66 acggtcaaacatatgctaaaaagtcaacggc 36
Score = 60.0 bits (30), Expect = 9e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||||| ||||| | |||| |||||||||||||||||||| | |||||||||||||
Sbjct: 8 atactccatccgtttcaaaatgtttgacgccgttgactttttagcatatgtttgaccgtt 67
Query: 71 catcttattgaaaa 84
| ||||||| ||||
Sbjct: 68 cgtcttattcaaaa 81
Score = 42.1 bits (21), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 176 tttttaataagacgaacggtcaaatatatttaaaaaagtcaacgg 220
|||| ||||||||||||||||||| || | |||||||||||||
Sbjct: 175 ttttaaataagacgaacggtcaaacatgtgctaaaaagtcaacgg 219
>49029_osa-miR806f:pmrd
Length = 241
Score = 157 bits (79), Expect = 5e-39
Identities = 183/214 (85%), Gaps = 4/214 (1%)
Strand = Plus / Minus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||||||||||| | ||||||||||| ||||||||||||| ||||||||||| |||
Sbjct: 241 atactccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgactgtt 182
Query: 71 catcttattgaaaa-cttttgtgaaacatataaaactatatgtatacataaaagtatatt 129
| ||||||| |||| ||||| ||||| || ||||| |||||| ||||| ||| ||||||
Sbjct: 181 cgtcttattcaaaaacttttatgaaatatgtaaaattatatgcctacatgaaaatatatt 122
Query: 130 taacaatgaatcaaatgataggaaaagaattaataattacttaaaattttt--aataaga 187
|||||||||||||||||||||||||||||||| ||| | | ||||||||| |||||||
Sbjct: 121 taacaatgaatcaaatgataggaaaagaattattaagt-gtcaaaattttttgaataaga 63
Query: 188 cgaacggtcaaatatatttaaaaaagtcaacggc 221
|||||||||||| || | ||||||||||||||
Sbjct: 62 cgaacggtcaaacatgtaataaaaagtcaacggc 29
Score = 67.9 bits (34), Expect = 4e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtttcggaatgtttgacgccgttgactttttattacatgtttgaccgtt 60
Query: 71 catcttattgaaaa 84
| ||||||| ||||
Sbjct: 61 cgtcttattcaaaa 74
>49024_osa-miR806a:pmrd
Length = 252
Score = 147 bits (74), Expect = 5e-36
Identities = 163/190 (85%), Gaps = 2/190 (1%)
Strand = Plus / Minus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||||||||||| |||| |||||| ||||||||||||| |||||||| ||||||
Sbjct: 247 atactccctccgttttaaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 188
Query: 71 catcttattgaaaacttttgtgaaacatataaaactatatgtatacataaaagtatattt 130
| ||||||| || |||| ||||| | ||||||||||||| ||||| |||||||||||
Sbjct: 187 cgtcttattaaatttttttttgaaatacgtaaaactatatgtgtacatgaaagtatattt 128
Query: 131 aacaatgaatcaaatgataggaaaagaattaataattacttaaaattttt-aataagacg 189
|||||||||||||||| || ||||||||| |||||||||||||| ||||| |||||||||
Sbjct: 127 aacaatgaatcaaatg-tatgaaaagaataaataattacttaaattttttgaataagacg 69
Query: 190 aacggtcaaa 199
|| |||||||
Sbjct: 68 aatggtcaaa 59
Score = 48.1 bits (24), Expect = 3e-06
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 10 tatactccctccgtccctaaatatttgacgccgttgacttttttaa-acatgtttgaccg 68
||||||| |||||| | |||| |||||| ||||||||||||| || || |||||||||
Sbjct: 7 tatactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgacca 66
Query: 69 ttcatcttattgaaaa 84
||| ||||||| ||||
Sbjct: 67 ttcgtcttattcaaaa 82
>49026_osa-miR806c:pmrd
Length = 270
Score = 145 bits (73), Expect = 2e-35
Identities = 165/193 (85%), Gaps = 2/193 (1%)
Strand = Plus / Minus
Query: 11 atactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgtt 70
||||||| ||||| | |||| |||||| ||||||||||||| |||||||||||| ||
Sbjct: 257 atactccatccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccatt 198
Query: 71 catcttattgaaaac-ttttgtgaaacatataaaactatatgtatacataaaagtatatt 129
| ||||||| |||| |||| ||||| || ||||||||||||| ||||| ||||||||||
Sbjct: 197 cgtcttattcaaaaaattttatgaaatatgtaaaactatatgtgtacatgaaagtatatt 138
Query: 130 taacaatgaatcaaatgataggaaaagaattaataattacttaaaattttt-aataagac 188
||||||| ||||||| |||| ||||| ||| |||||||||||||| ||||| ||||||||
Sbjct: 137 taacaataaatcaaacgatatgaaaaaaataaataattacttaaattttttgaataagac 78
Query: 189 gaacggtcaaata 201
||| | |||||||
Sbjct: 77 gaatgatcaaata 65
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 12 tactccctccgtccctaaatatttgacgccgttgacttttt 52
|||||||||||| | |||| |||||| |||||||||||||
Sbjct: 18 tactccctccgtttcaaaatgtttgacaccgttgacttttt 58
>49030_osa-miR806g:pmrd
Length = 240
Score = 141 bits (71), Expect = 3e-34
Identities = 141/163 (86%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 12 tactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccgttc 71
|||||||||||| | |||| |||||| ||||||||||||| ||||||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 72 atcttattgaaaactttt-gtgaaacatataaaactatatgtatacataaaagtatattt 130
||||||| |||| || |||||| || |||||||| |||| ||||| |||||||||||
Sbjct: 180 gtcttattcaaaaaagttagtgaaatatgtaaaactacatgtgtacatgaaagtatattt 121
Query: 131 aacaatgaatcaaatgataggaaaagaattaataattacttaa 173
||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 120 aacaatgaatcaaatgatataaaaagaataaataattacttaa 78
Score = 42.1 bits (21), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 176 tttttaataagacgaacggtcaaatatatttaaaaaagtcaacgg 220
|||| ||||||||||||||||||| || | |||||||||||||
Sbjct: 168 ttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacgg 212
>49027_osa-miR806d:pmrd
Length = 271
Score = 137 bits (69), Expect = 5e-33
Identities = 164/193 (84%), Gaps = 2/193 (1%)
Strand = Plus / Minus
Query: 9 ttatactccctccgtccctaaatatttgacgccgttgacttttttaaacatgtttgaccg 68
||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||
Sbjct: 257 ttatactccctccgttttaaaatgtttgacaccgttgactttttagcacatgtttgaccg 198
Query: 69 ttcatcttattg-aaaacttttgtgaaacatataaaactatatgtatacataaaagtata 127
|| ||||||| |||| |||||||| || ||||||||||||| | || ||||||||
Sbjct: 197 ttagtcttattctaaaaaaattgtgaaatatgtaaaactatatgtgcatatgaaagtata 138
Query: 128 tttaacaatgaatcaaatgataggaaaagaattaataattacttaaaattttt-aataag 186
|||||||||||||||||||||| ||||||||| |||||||| ||||| ||||| |||||
Sbjct: 137 tttaacaatgaatcaaatgatatgaaaagaataaataattatttaaattttttgaataaa 78
Query: 187 acgaacggtcaaa 199
||||| |||||||
Sbjct: 77 acgaatggtcaaa 65
>49025_osa-miR806b:pmrd
Length = 215
Score = 125 bits (63), Expect = 2e-29
Identities = 139/162 (85%), Gaps = 3/162 (1%)
Strand = Plus / Minus
Query: 33 tttgacgccgttgacttttttaaacatgtttgaccgttcatcttattgaaaact-tttgt 91
|||||| ||||||||||||| |||| ||||| |||| ||||||| |||| |||||
Sbjct: 207 tttgacaccgttgactttttagcacattcttgactgttcgtcttattaaaaaaaatttgt 148
Query: 92 gaaacatataaaactatatgtatacataaaagtatatttaacaatgaatcaaatgatagg 151
|||| || ||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 147 gaaatatgtaaaattatatgtgtacatgaaagtatatttaacaatgaatcaaatgatata 88
Query: 152 aaaagaattaataattacttaaaattttt--aataagacgaa 191
|||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 87 aaaagaataaataattacttaaatttttttgaataagacgaa 46
>50427_osa-miRf11212-akr:pmrd
Length = 152
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatactccctccgtccctaaata 32
|||||||||||||||||||||||
Sbjct: 10 tatactccctccgtccctaaata 32
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tatactccctccgtccctaaata 32
|||||||||||||||||||||||
Sbjct: 143 tatactccctccgtccctaaata 121
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atactccctccgtccctaaatat 33
|||||||||||||||||||||||
Sbjct: 1 atactccctccgtccctaaatat 23
>51023_osa-miRf11808-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtccctaaatat 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtccctaaatat 26
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtccctaaatat 33
||||||||||||||||||||||
Sbjct: 113 tactccctccgtccctaaatat 92
>50827_osa-miRf11612-akr:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtccctaaatat 33
||||||||||||||||||||||
Sbjct: 1 tactccctccgtccctaaatat 22
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtccctaaatat 33
||||||||||||||||||||||
Sbjct: 126 tactccctccgtccctaaatat 105
>49950_osa-miRf10735-akr:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtccctaaatat 33
||||||||||||||||||||||
Sbjct: 7 tactccctccgtccctaaatat 28
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 226 atatttagggatggagggagta 247
||||||||||||||||||||||
Sbjct: 107 atatttagggatggagggagta 128
>49517_osa-miRf10302-akr:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 attatactccctccgtccctaaatat 33
||||||||||||||||||| ||||||
Sbjct: 101 attatactccctccgtcccaaaatat 76
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 ttatactccctccgtccctaaatat 33
|||||||||||||||||| ||||||
Sbjct: 7 ttatactccctccgtcccaaaatat 31
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 ttatactccctccgtccctaaatat 33
|||||||||||||||||| ||||||
Sbjct: 7 ttatactccctccgtcccaaaatat 31
>49366_osa-miRf10151-akr:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 10 tatactccctccgtccctaaatat 33
||||||||||||||||| ||||||
Sbjct: 81 tatactccctccgtcccaaaatat 58
