miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40166_ath-MIR842:mirbase
          Length = 199

 Score =  252 bits (127), Expect = 5e-68
 Identities = 127/127 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagaggctataagcgggatgatgaatccgaccatgatggtgttgcagaaatttatgtatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37  gagaggctataagcgggatgatgaatccgaccatgatggtgttgcagaaatttatgtatg 96

                                                                       
Query: 61  atgtagttattgtccagggatcgaaacaccatcatggtcagatccgtcatcccacttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  atgtagttattgtccagggatcgaaacaccatcatggtcagatccgtcatcccacttatg 156

                  
Query: 121 ttttctt 127
           |||||||
Sbjct: 157 ttttctt 163




>39924_aly-MIR842:mirbase
          Length = 157

 Score =  159 bits (80), Expect = 6e-40
 Identities = 106/114 (92%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                       
Query: 11  aagcgggatgatgaatccgaccatgatggtgttgcagaaatttatgtatgatgtagttat 70
           ||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 28  aagcgggatgatggatccgaccatgatggtgttgcagaaacttatgtacgaggtagttat 87

                                                                 
Query: 71  tgtccagggatcgaaacaccatcatggtcagatccgtcatcccacttatgtttt 124
              |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  ---ccaggggtcgaaacaccatcatggtcagatccgtcatcccacttatgtttt 138



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 85  aacaccatcatggtcagatccgtcatccc 113
           ||||||||||||||| ||||| |||||||
Sbjct: 60  aacaccatcatggtcggatccatcatccc 32