miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47164_ath-miRf10064-akr:pmrd
          Length = 178

 Score =  353 bits (178), Expect = 3e-98
 Identities = 178/178 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccgatctccggtgggatttctccggcgatgttgttgtaccaagctatgaattgctcgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tccgatctccggtgggatttctccggcgatgttgttgtaccaagctatgaattgctcgag 60

                                                                       
Query: 61  tttctggaggtttccgatctccggtgggattgtaccgttgagataattgagactgagatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttctggaggtttccgatctccggtgggattgtaccgttgagataattgagactgagatc 120

                                                                     
Query: 121 aatcgttcgtagctcagagcattgagatatcgccggtggaatctctccggtgacgaga 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcgttcgtagctcagagcattgagatatcgccggtggaatctctccggtgacgaga 178




>47810_ath-miRf10710-akr:pmrd
          Length = 173

 Score =  343 bits (173), Expect = 3e-95
 Identities = 173/173 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgatctccggtgggatttctccggcgatgttgttgtaccaagctatgaattgctcgagtt 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgatctccggtgggatttctccggcgatgttgttgtaccaagctatgaattgctcgagtt 60

                                                                       
Query: 63  tctggaggtttccgatctccggtgggattgtaccgttgagataattgagactgagatcaa 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tctggaggtttccgatctccggtgggattgtaccgttgagataattgagactgagatcaa 120

                                                                
Query: 123 tcgttcgtagctcagagcattgagatatcgccggtggaatctctccggtgacg 175
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgttcgtagctcagagcattgagatatcgccggtggaatctctccggtgacg 173