miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47552_ath-miRf10452-akr:pmrd
          Length = 116

 Score =  230 bits (116), Expect = 2e-61
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                       
Query: 16  gggtcggattcggttcaggttcgggttcgagtttgggtttatttatatatagaacgggtc 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 gggtcggattcggttcaggttcgggttcgagtttgggtttatttatatatagaacgggtc 57

                                                                   
Query: 76  ttaaatttctaaacccgaaaaactcgaacccaaaatacctgacccaaacccgaccc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  ttaaatttctaaacccgaaaaactcgaacccaaaatacctgacccaaacccgaccc 1




>47866_ath-miRf10766-akr:pmrd
          Length = 112

 Score =  222 bits (112), Expect = 6e-59
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                       
Query: 18  gtcggattcggttcaggttcgggttcgagtttgggtttatttatatatagaacgggtctt 77
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtcggattcggttcaggttcgggttcgagtttgggtttatttatatatagaacgggtctt 60

                                                               
Query: 78  aaatttctaaacccgaaaaactcgaacccaaaatacctgacccaaacccgac 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaatttctaaacccgaaaaactcgaacccaaaatacctgacccaaacccgac 112




>47553_ath-miRf10453-akr:pmrd
          Length = 110

 Score =  218 bits (110), Expect = 9e-58
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                       
Query: 19  tcggattcggttcaggttcgggttcgagtttgggtttatttatatatagaacgggtctta 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcggattcggttcaggttcgggttcgagtttgggtttatttatatatagaacgggtctta 51

                                                             
Query: 79  aatttctaaacccgaaaaactcgaacccaaaatacctgacccaaacccga 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  aatttctaaacccgaaaaactcgaacccaaaatacctgacccaaacccga 1