miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00893;MIR854;AL391731.1/32790-33015 3702:Arabidopsis thaliana
(thale cress)
Length = 226
Score = 69.9 bits (35), Expect = 1e-11
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 49 aggtgatggagatgaagacactcgacctcgtggtcgagtggtgaggtgaagtggtgatgt 108
||||| ||||| |||| | |||||||| | ||||||| |||||| |||||| |||| ||
Sbjct: 225 aggtggtggaggtgaatatactcgaccagggggtcgaggggtgagatgaagttgtgaagt 166
Query: 109 cctctactcgaccagggggtcgagtggtctg 139
|| ||||||||| | ||||||||||||||||
Sbjct: 165 cccctactcgactaaggggtcgagtggtctg 135
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 113 tactcgaccagggggtcgagtggtctgctgaggttgtgaa-tcgtctactcgacctaggg 171
|||||||||||||||||||| ||| | ||| |||||||| || ||||||||| ||||
Sbjct: 207 tactcgaccagggggtcgaggggtgagatgaagttgtgaagtcccctactcgactaaggg 148
Query: 172 gtcgagtggt 181
||||||||||
Sbjct: 147 gtcgagtggt 138
