miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47680_ath-miRf10580-akr:pmrd
Length = 84
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 1 ccctcgcaaatttgcgacgtttttgcggggaatcatgacttccacgcagtttcctcgcaa 60
||||||||||||||||| ||||||||| ||||| || |||||||||||||||||||||
Sbjct: 2 ccctcgcaaatttgcgatgtttttgcgaagaatcgtgctttccacgcagtttcctcgcaa 61
Query: 61 ttgtctcgcaaatttgcgaggg 82
||||||||||||||||||||
Sbjct: 62 acgtctcgcaaatttgcgaggg 83
>47361_ath-miRf10261-akr:pmrd
Length = 114
Score = 99.6 bits (50), Expect = 3e-22
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 1 ccctcgcaaatttgcgacgtttttgcggggaatcatgacttccacgcagtttcctcgcaa 60
||||||||||||||||| ||||||||| ||||| || |||||||||||||||||||||
Sbjct: 98 ccctcgcaaatttgcgatgtttttgcgaagaatcgtgctttccacgcagtttcctcgcaa 39
Query: 61 ttgtctcgcaaatttgcgaggg 82
||||||||||||||||||||
Sbjct: 38 acgtctcgcaaatttgcgaggg 17
>48195_ath-miRf11095-akr:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 57 gcaattgtctcgcaaatttgcgag 80
|||||| |||||||||||||||||
Sbjct: 77 gcaattctctcgcaaatttgcgag 100
>48035_ath-miRf10935-akr:pmrd
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1 ccctcgcaaatttgcgacgtttttgcg 27
||||||||||| |||||||| ||||||
Sbjct: 28 ccctcgcaaatatgcgacgtctttgcg 2
