miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AAAA02000569.1/44638-44880 39946:Oryza sativa Indica
Group
Length = 243
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 63 cgagtggtcaaacgttgcaagcaaaaactcaaaatctcttatattgtgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||| | ||||||||| |||||| ||| |||| ||||||||||||||
Sbjct: 181 cgagtggtcaaacattgtacgcaaaaactcaaaatcccttgtattgtgggacggagggag 240
Query: 251 t 251
|
Sbjct: 241 t 241
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| |||||| ||||||||| ||||||||| |||||||| ||||
Sbjct: 2 tactccctccgtcccacaatataagagattttgag--tttttgcttgcaacgtttgacca 59
Query: 70 ctcgtcttatt 80
|||| ||||||
Sbjct: 60 ctcggcttatt 70
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| ||| || |||||||||| |||||||||| ||||| |||| |||
Sbjct: 243 gtactccctccgtcccacaatacaagggatttt--gagtttttgcgtacaatgtttgacc 186
Query: 69 actcgtcttat 79
|||||||||||
Sbjct: 185 actcgtcttat 175
>RF01058;MIR806;AP008212.1/23750957-23751199 39947:Oryza sativa
Japonica Group
Length = 243
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 181 cgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggagggag 240
Query: 251 t 251
|
Sbjct: 241 t 241
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 193 agtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||
Sbjct: 61 agtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacggagggagt 3
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/75 (88%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| ||| ||||||||||||| ||||||||||| |||||||| |||
Sbjct: 1 gtactccctccgtcccacaatataagggatttt--cagtttttgcttgcaacgtttgacc 58
Query: 69 actcgtcttatttaa 83
||| |||||||||||
Sbjct: 59 acttgtcttatttaa 73
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||| |||||||| ||||
Sbjct: 242 tactccctccgtcccataatataagggatttt--gagtttttgcttgcaacgtttgacca 185
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 184 ctcgtcttatt 174
>RF01058;MIR806;AACV01016618.1/3926-4166 39947:Oryza sativa Japonica
Group
Length = 241
Score = 97.6 bits (49), Expect = 8e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||||||| |||||||| |||||| |||||||| ||||||||||||||
Sbjct: 179 cgagtggtcaaacgttgcaaacaaaaactcaaaatcccttatattgtgggacggagggag 238
Query: 251 t 251
|
Sbjct: 239 t 239
Score = 65.9 bits (33), Expect = 3e-10
Identities = 64/72 (88%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| ||| ||||||||||||| ||||||||| || |||||||| |||
Sbjct: 241 gtactccctccgtcccacaatataagggatttt--gagtttttgtttgcaacgtttgacc 184
Query: 69 actcgtcttatt 80
||||||||||||
Sbjct: 183 actcgtcttatt 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 61/70 (87%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 12 actccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-accac 70
||||||||| ||| | | ||||||||||||| |||||||||||| |||||||| |||||
Sbjct: 3 actccctccgtcccataatataagggatttt--gagtttttgcttgcaacgtttgaccac 60
Query: 71 tcgtcttatt 80
|||| |||||
Sbjct: 61 tcgttttatt 70
>RF01058;MIR806;AAAA02003925.1/62067-62310 39946:Oryza sativa Indica
Group
Length = 244
Score = 91.7 bits (46), Expect = 5e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 198 tcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 189 tcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggagggagt 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| || |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacattacaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||| |||||||| ||||
Sbjct: 243 tactccctccgtcccataatataagggatttt--gagtttttgcttgcaacgtttgacca 186
Query: 70 ctcgtcttatt 80
||||||||||
Sbjct: 185 ttcgtcttatt 175
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||| || |||| ||||
Sbjct: 2 tactccctccgtcccataatataagggatttt--gagtttttgcttgtaatgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
>RF01058;MIR806;AAAA02018370.1/12201-12442 39946:Oryza sativa Indica
Group
Length = 242
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacgttacaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| |||||||||||| |||||| |||||||| ||||||||||||||
Sbjct: 180 cgagtggtcaaacgttacaagcaaaaactgaaaatcccttatattgtgggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||| ||||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggatttt--gagtttttgcttgtaacgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||||||||||||| ||||||||||| ||||||| ||||
Sbjct: 241 tactccctccgtcccacaatataagggatttt--cagtttttgcttgtaacgtttgacca 184
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 183 ctcgtcttatt 173
>RF01058;MIR806;AAAA02020204.1/6387-6629 39946:Oryza sativa Indica
Group
Length = 243
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||| |||||| ||||||||||||||||| |||||
Sbjct: 63 cgagtggtcaaacgttgcaagcaaaaactcaaaatcccttatattatgggacggggggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 193 agtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||
Sbjct: 183 agtggtcaaacgttgcaagcaaaaactgaaaatcccttatattgtgggacggagggagt 241
Score = 63.9 bits (32), Expect = 1e-09
Identities = 66/75 (88%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| ||| ||||||||||||| ||||||||||| |||||||| |||
Sbjct: 243 gtactccctccgtcccacaatataagggatttt--cagtttttgcttgcaacgtttgacc 186
Query: 69 actcgtcttatttaa 83
||| |||||||||||
Sbjct: 185 acttgtcttatttaa 171
Score = 58.0 bits (29), Expect = 7e-08
Identities = 48/52 (92%), Gaps = 3/52 (5%)
Strand = Plus / Plus
Query: 30 tataagggattttgagagtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 21 tataagggattttgag--tttttgcttgcaacgtttgaccactcgtcttatt 70
>RF01058;MIR806;AACV01007669.1/15429-15672 39947:Oryza sativa
Japonica Group
Length = 244
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacattgcaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| | ||| |||||||||||||||| |||||| |||||||| ||||||||| ||||
Sbjct: 182 cgagtggttaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacggaaggag 241
Query: 251 t 251
|
Sbjct: 242 t 242
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||| ||| |||| ||||
Sbjct: 2 tactccctccgtcccataatataagggatttt--gagtttttgcttgcaatgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||| ||| ||| ||| ||||||||||||| |||||||||||| |||| ||| ||||
Sbjct: 243 tactccttccgtcccacaatataagggatttt--gagtttttgcttgcaacatttaacca 186
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 185 ctcgtcttatt 175
>RF01058;MIR806;AAAA02030701.1/27339-27098 39946:Oryza sativa Indica
Group
Length = 242
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacgttccaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||||||||||||| | ||||||||| |||||||| |||||||||||||||
Sbjct: 181 gagtggtcaaacgttgcaagcagtagcttaaaatcccttatattgtgggacggagggagt 240
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||| ||||||| ||||
Sbjct: 2 tactccctccgtcccataatataagggatttt--gagtttttgcttggaacgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
>RF00906;MIR1122;AAAA02004418.1/2515-2382 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||||||
Sbjct: 66 cgagtggtcaaacgttgcaagcaaaaactcaaaatcacttatattatgagacggagggag 7
Query: 251 t 251
|
Sbjct: 6 t 6
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 198 tcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| ||||||| |||||| |||||||| |||||||||||||||
Sbjct: 76 tcaaacgttgcaagtaaaaactcaaaatcccttatattgtgggacggagggagt 129
Score = 50.1 bits (25), Expect = 2e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 45 gagtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||||| |||||||| |||||||||||||||
Sbjct: 37 gagtttttgcttgcaacgtttgaccactcgtcttatt 73
Score = 48.1 bits (24), Expect = 6e-05
Identities = 48/55 (87%), Gaps = 2/55 (3%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt 65
|||||||||| ||| ||| ||||||||||||| |||||||| ||| ||||||||
Sbjct: 130 tactccctccgtcccacaatataagggatttt--gagtttttacttgcaacgttt 78
>RF01058;MIR806;AL607006.4/105077-105318 4530:Oryza sativa (rice)
Length = 242
Score = 83.8 bits (42), Expect = 1e-15
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctctt-atattatgggacggaggga 249
|||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||
Sbjct: 64 cgagtggtcaaacgttgcaagcaaaaactcaaaatcccttaatattatgggacggaggga 5
Query: 250 gt 251
||
Sbjct: 4 gt 3
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||| ||||||| |||||| || |||| ||||||||||||||
Sbjct: 182 cgagtggtcaaacgttgcaagaaaaaactcaaaatccct--tattgtgggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
Score = 54.0 bits (27), Expect = 1e-06
Identities = 46/50 (92%), Gaps = 3/50 (6%)
Strand = Plus / Plus
Query: 32 taagggattttgagagtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 24 taagggattttgag--tttttgcttgcaacgtttgaccactcgtcttatt 71
Score = 52.0 bits (26), Expect = 4e-06
Identities = 63/72 (87%), Gaps = 5/72 (6%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| ||| ||||||||||||||| ||||| ||| |||||||| |||
Sbjct: 242 gtactccctccgtcccaca--ataagggattttgag--ttttttcttgcaacgtttgacc 187
Query: 69 actcgtcttatt 80
||||||||||||
Sbjct: 186 actcgtcttatt 175
>RF01058;MIR806;AP003298.3/13500-13742 39947:Oryza sativa Japonica
Group
Length = 243
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 63 cgagtggtcaaacattgcaagcaaaaacttaaaatcccttatattataagacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 181 cgagtgttcaaacgttacaagcaaaaacttaaaatcccttatattataagacggagggag 240
Query: 251 t 251
|
Sbjct: 241 t 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| || || | ||||||||||||| ||||||||||| ||| |||| ||||
Sbjct: 2 tactccctccgtcttataatataagggatttt--aagtttttgcttgcaatgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
>RF01058;MIR806;AACV01002156.1/2447-2686 39947:Oryza sativa Japonica
Group
Length = 240
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacagtgcaagtaaaaacttaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 209 aagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| ||||||| |||||||||| ||||||||||||
Sbjct: 196 aagcaaaaactcaaaatcttttatattatgagacggagggagt 238
>RF01058;MIR806;AC097368.3/118507-118267 39947:Oryza sativa Japonica
Group
Length = 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||
Sbjct: 63 cgagtgatcaaacagtgcaagtaaaaactcaaaatctcttatattataggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacgg 244
|||||| |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 179 cgagtggtcaaacaatgtaagcaaaaacttaaaatctcttatattatgggacgg 232
>RF01058;MIR806;AAAA02017486.1/15213-14973 39946:Oryza sativa Indica
Group
Length = 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 179 cgagtggtcaaacagtgcaagcaaaaactcaaaatctcttatattatgggatggagggag 238
Query: 251 t 251
|
Sbjct: 239 t 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||| ||||||| |||||||||||||| |||||||||||||||
Sbjct: 63 cgagtggtcaaacagtgcaagaaaaaactcaaaatctcttatatcatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
>RF01058;MIR806;AACV01013185.1/13859-13616 39947:Oryza sativa
Japonica Group
Length = 244
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||| ||||||| |||||| |||||||| ||||||||||||||
Sbjct: 182 cgagtggtcaaacgttgcaagtaaaaactgaaaatcccttatattgtgggacggagggag 241
Query: 251 t 251
|
Sbjct: 242 t 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| | ||||||| | |||||||||| |||||| ||||||||||||||||||| |||
Sbjct: 63 cgagtggttaaacgttacgagcaaaaactcaaaatcccttatattatgggacggagagag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 58.0 bits (29), Expect = 7e-08
Identities = 63/72 (87%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| ||| ||||||||||||| ||||||| ||| |||||||| |||
Sbjct: 244 gtactccctccgtcccacaatataagggatttt--cagtttttacttgcaacgtttgacc 187
Query: 69 actcgtcttatt 80
||||||||||||
Sbjct: 186 actcgtcttatt 175
>RF01058;MIR806;AACV01022700.1/19974-19734 39947:Oryza sativa
Japonica Group
Length = 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
||||||||||||| |||||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 179 cgagtgatcaaaccgtgcaagcaaaaactcaaaatcccttatattatgggatggagggag 238
Query: 251 t 251
|
Sbjct: 239 t 239
Score = 58.0 bits (29), Expect = 7e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 207 gcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| | |||||| |||||||||||||||||| |||||
Sbjct: 47 gcaagcaaaaattcaaaatcccttatattatgggacggaaggagt 3
Score = 56.0 bits (28), Expect = 3e-07
Identities = 65/75 (86%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||||||| | | ||||||||||||| |||||||||||| || |||| | |
Sbjct: 241 gtactccctccatcccataatataagggatttt--gagtttttgcttgcacggtttgatc 184
Query: 69 actcgtcttatttaa 83
|||||||||||||||
Sbjct: 183 actcgtcttatttaa 169
>RF01058;MIR806;AP003911.3/91791-91550 39947:Oryza sativa Japonica
Group
Length = 242
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||||||| |||||||| |||||| |||||||| ||||||||||||||
Sbjct: 180 cgagtggtcaaacgttgcaatcaaaaactcaaaatcccttatattttgggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacg 243
|||||| ||||||| ||||| |||||||| |||||| ||||||||||||||||
Sbjct: 62 cgagtggtcaaacgctgcaaacaaaaactcaaaatcccttatattatgggacg 10
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| ||||||||| || |||||||| ||||
Sbjct: 241 tactccctccgtcccaaaatataagggatttt--gagtttttgattgcaacgtttgacca 184
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 183 ctcgtcttatt 173
>RF01058;MIR806;AACV01004109.1/11153-11393 39947:Oryza sativa
Japonica Group
Length = 241
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||| |||||||||||||||| |||||| |||||||| ||||||||||||||
Sbjct: 179 cgagtggtcaaatgttgcaagcaaaaactcaaaatcccttatattgtgggacggagggag 238
Query: 251 t 251
|
Sbjct: 239 t 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||| |||||||| |||||| |||||||||||||| ||||||||
Sbjct: 63 cgagtggtcaaacattgcaaacaaaaactcaaaatcccttatattatgggatggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 63.9 bits (32), Expect = 1e-09
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||||||||||||| |||||||||||| |||| ||| ||||
Sbjct: 240 tactccctccgtcccacaatataagggatttt--gagtttttgcttgcaacatttgacca 183
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 182 ctcgtcttatt 172
Score = 61.9 bits (31), Expect = 4e-09
Identities = 65/74 (87%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||||||| | | ||||||||||||| ||||||||| || ||| |||| ||||
Sbjct: 2 tactccctccatcccataatataagggatttt--gagtttttgtttgcaatgtttgacca 59
Query: 70 ctcgtcttatttaa 83
||||||||||||||
Sbjct: 60 ctcgtcttatttaa 73
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||| || |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 62 gagtggtcaaacactgtaagcaaaaacttaaaatcccttatattatgggacggagggagt 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| || ||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 179 cgagtggtcaaacactgtaagcaaaaactcaaaatcccttatattatgggacggagggag 238
Query: 251 t 251
|
Sbjct: 239 t 239
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 240 tactccctccgtcccataatataagggatttt--gagtttttgcttacagtgtttgacca 183
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 182 ctcgtcttatt 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||||||||| |||| ||||
Sbjct: 2 tactccctccgtcccataatataagggatttt--aagtttttgcttacagtgtttgacca 59
Query: 70 ctcgtcttatttaa 83
||| ||||||||||
Sbjct: 60 ctcatcttatttaa 73
>RF00906;MIR1122;AL731617.3/71366-71211 39947:Oryza sativa Japonica
Group
Length = 156
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| ||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||
Sbjct: 65 gagtggtcaaacgttacaaacaaaaacttaaaatcccttatattatgggacgaagggagt 6
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| ||| |||||| | ||||| |||||||| ||||||||||||||
Sbjct: 91 cgagtggtcaaacgttacaaacaaaaaatcaaaattccttatattgtgggacggagggag 150
Query: 251 t 251
|
Sbjct: 151 t 151
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||||||| ||||||| |||||| || ||||||| ||||
Sbjct: 152 tactccctccgtcccacaatataaggaattttgat--tttttgtttgtaacgtttgacca 95
Query: 70 ctcgtcttatttaa 83
||||||||||||||
Sbjct: 94 ctcgtcttatttaa 81
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 198 tcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 183 tcaaacgttgcaatgaaaaactcaaaatcccttatattatgggacggagggagt 236
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagg 247
|||||| ||||||||| || ||||||| |||||||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacgttataaagaaaaactcaaaatctcttatattatgggacggagg 7
>RF01058;MIR806;AK064773.1/2875-3117 39947:Oryza sativa Japonica
Group
Length = 243
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 198 tcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||| |||||||||||| |||||| | ||||||||||||||||||||||
Sbjct: 56 tcaaacgttacaagcaaaaactcaaaatcccctatattatgggacggagggagt 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||| |||| | || ||||| ||||||||||||||
Sbjct: 181 cgagtggtcaaacgttgcaagcaaaaactcaaaagccctcatattgtgggacggagggag 240
Query: 251 t 251
|
Sbjct: 241 t 241
Score = 56.0 bits (28), Expect = 3e-07
Identities = 62/71 (87%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||| |||| ||||||| ||||||||| |||||||| ||||
Sbjct: 242 tactccctccgtcccacaatatgagggcttttgag--tttttgcttgcaacgtttgacca 185
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 184 ctcgtcttatt 174
Score = 48.1 bits (24), Expect = 6e-05
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| | | |||| |||||||| |||||||||||| ||||||| ||
Sbjct: 1 gtactccctccgtcccataatataggggatttt--gagtttttgcttgtaacgtttgact 58
Query: 69 actcgtcttatttaa 83
|||||||||||||||
Sbjct: 59 actcgtcttatttaa 73
>RF01058;MIR806;AP005460.3/69018-68774 39947:Oryza sativa Japonica
Group
Length = 245
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 198 tgcaagcaaaaactcaaaatcccttatattatgggacggagggagt 243
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 212 caaaaacttaaaatctcttatattatgggacggagggag 250
||||||||||||||| |||||||||||||||||||||||
Sbjct: 42 caaaaacttaaaatcccttatattatgggacggagggag 4
>RF01058;MIR806;AP002486.1/27565-27805 39947:Oryza sativa Japonica
Group
Length = 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 198 tcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| ||||||| |||||| |||||||| |||||||||||||||
Sbjct: 56 tcaaacgttgcaagtaaaaactcaaaatcccttatattctgggacggagggagt 3
Score = 60.0 bits (30), Expect = 2e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaa-tctcttatattatgggacggaggga 249
|||||| |||| |||| |||||||||||| |||| || |||||||| |||||||||||||
Sbjct: 178 cgagtggtcaagcgttacaagcaaaaactcaaaaatcccttatattgtgggacggaggga 237
Query: 250 gt 251
||
Sbjct: 238 gt 239
Score = 54.0 bits (27), Expect = 1e-06
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacg-tttacca 69
|||||||||| ||| ||| ||||||||||||| |||||||||||| |||| || ||||
Sbjct: 240 tactccctccgtcccacaatataagggatttt-tgagtttttgcttgtaacgcttgacca 182
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 181 ctcgtcttatt 171
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| | | ||||||||||||| |||||||| ||| |||||||| || |
Sbjct: 2 tactccctccgtcccagaatataagggatttt--gagtttttacttgcaacgtttgacta 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
>RF01058;MIR806;AC145127.1/405367-405608 39947:Oryza sativa Japonica
Group
Length = 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 198 tcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||| ||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 56 tcaaacgttataagcaaaaactcaaaatcccttatattatgggacggagggagt 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||| |||| |||||| |||||| |||||||| ||||||||||||||
Sbjct: 180 cgagtggtcaaacgttgtaagcgaaaactcaaaatcccttatattgtgggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 64/71 (90%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 241 tactccctccgtcccacaatataagggatttt--gagttttcgcttacaacgtttgacca 184
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 183 ctcgtcttatt 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/70 (85%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgtttaccac 70
|||||||||| ||| | | |||||||||||||||| |||||||||| ||||||| |||
Sbjct: 2 tactccctccgtcccataatataagggattttgag--tttttgcttataacgtttgacac 59
Query: 71 tcgtcttatt 80
|||| |||||
Sbjct: 60 tcgttttatt 69
>RF01058;MIR806;AP008214.1/3500621-3500380 39947:Oryza sativa
Japonica Group
Length = 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 48 tgcaagcaaaaactcaaaatcccttatattatgggacggagggagt 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 180 cgagtggtcaaacactacaagcaaaaactcaaaatcccttatattatgggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
>RF01058;MIR806;AP008210.1/16807344-16807107 39947:Oryza sativa
Japonica Group
Length = 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||| | |||| ||||||| |||||| |||||||||||||||||||||||
Sbjct: 176 cgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgggacggagggag 235
Query: 251 t 251
|
Sbjct: 236 t 236
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| |||| |||||| |||||| |||||||| ||||||||||||||
Sbjct: 63 cgagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||||||||||||| | |||||| ||| ||||||| ||||
Sbjct: 2 tactccctccgtcccacaatataagggatttt--gggtttttacttgtaacgtttgacca 59
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 60 ctcgtcttatt 70
>RF01058;MIR806;AAAA02030884.1/12329-12088 39946:Oryza sativa Indica
Group
Length = 242
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||| |||| |||||| |||||| ||||||||||| |||||||||||
Sbjct: 63 cgagtggtcaaacgttggaagcgaaaactcaaaatcccttatattatgagacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 58.0 bits (29), Expect = 7e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||||||| ||| |||| ||||||||| | |||||| ||||||||||||||
Sbjct: 181 cgagtggtcaaacgttgtaagtaaaa-cttaaaatcccctatattgtgggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
Score = 56.0 bits (28), Expect = 3e-07
Identities = 64/74 (86%), Gaps = 4/74 (5%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| |||| |||||||| || |||| |||||||||||| ||||
Sbjct: 241 tactccctccgtcccacaatataggggattttaag---ttttacttacaacgtttgacca 185
Query: 70 ctcgtcttatttaa 83
||||||||||||||
Sbjct: 184 ctcgtcttatttaa 171
Score = 50.1 bits (25), Expect = 2e-05
Identities = 47/52 (90%), Gaps = 3/52 (5%)
Strand = Plus / Plus
Query: 30 tataagggattttgagagtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||| ||||||| |||| |||||||| |||||||||||||||
Sbjct: 21 tataagggatttt--gagttttcgcttccaacgtttgaccactcgtcttatt 70
>RF01058;MIR806;AP008209.1/25433439-25433201 39947:Oryza sativa
Japonica Group
Length = 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 177 cgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgggacggagggag 236
Query: 251 t 251
|
Sbjct: 237 t 237
>RF01058;MIR806;AC129719.2/23163-23401 39947:Oryza sativa Japonica
Group
Length = 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 177 cgagtggtcaaacagtgcaagcaaaaactcaaaatcctttatattatgggacggagggag 236
Query: 251 t 251
|
Sbjct: 237 t 237
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
||||||||||||| | ||| |||||||| |||||| |||||||||||||| ||||||||
Sbjct: 63 cgagtgatcaaacagtacaaacaaaaactcaaaatcccttatattatgggatggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 gtactccctccatcctacagtataagggattttgag 45
||||||||||||||| | | ||||||||||||||||
Sbjct: 1 gtactccctccatcccataatataagggattttgag 36
>RF01058;MIR806;AL731624.3/57538-57775 39947:Oryza sativa Japonica
Group
Length = 238
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||| | |||| ||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacgatacaagtaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||||||| |||| |||||| |||||| |||||||| ||||||||||||||
Sbjct: 176 cgagtggtcaaacgttacaagtaaaaacccaaaatcccttatattgtgggacggagggag 235
Query: 251 t 251
|
Sbjct: 236 t 236
Score = 48.1 bits (24), Expect = 6e-05
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
|||||||||| ||| ||| ||||||||||||| | |||||| ||| ||||||| ||||
Sbjct: 237 tactccctccgtcccacaatataagggatttt--gggtttttacttgtaacgtttgacca 180
Query: 70 ctcgtcttatt 80
|||||||||||
Sbjct: 179 ctcgtcttatt 169
>RF01058;MIR806;AP008211.1/8180562-8180322 39947:Oryza sativa
Japonica Group
Length = 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||||||
Sbjct: 179 cgagtggtcaaacagtgcaaacaaaaactcaaaatcccttatattatgggacggagggag 238
Query: 251 t 251
|
Sbjct: 239 t 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagtt 252
||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 48 tgcaaacaaaaactcaaaatcccttatattatgggacggagggagtt 2
>RF01058;MIR806;AACV01007529.1/6632-6394 39947:Oryza sativa Japonica
Group
Length = 239
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacagtacaaggaaaaactcaaaatctcttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 177 cgagtggtcaaacagtacaagcaaaaactcaaaatcccttatattatgggacggagggag 236
Query: 251 t 251
|
Sbjct: 237 t 237
>RF01058;MIR806;AP004797.3/60701-60942 39947:Oryza sativa Japonica
Group
Length = 242
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtgatcaaagagtgcaagcaaaaacacaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 208 caagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 197 caagcaaaaactcaaaatcccttatattatgggacggagggagt 240
>RF01058;MIR806;AAAA02007696.1/5047-4813 39946:Oryza sativa Indica
Group
Length = 235
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||||||||| | |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 61.9 bits (31), Expect = 4e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 193 agtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||| |||||| |||||||||| | | |||||| ||||||||||||||||||||||||
Sbjct: 175 agtggtcaaacagtgcaagcaaatagtcaaaatcccttatattatgggacggagggagt 233
>RF01058;MIR806;AC133008.3/78480-78237 39947:Oryza sativa Japonica
Group
Length = 244
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacaatacaagcaaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 212 caaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||| |||||| ||||||||||||||||||||||||
Sbjct: 203 caaaaactcaaaatcccttatattatgggacggagggagt 242
>RF01058;MIR806;AACV01010642.1/18111-18350 39947:Oryza sativa
Japonica Group
Length = 240
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| ||||||| |||||||||||||| ||||| |||||||||||||||||| |||||
Sbjct: 62 gagtggtcaaacggtgcaagcaaaaactccaaatcccttatattatgggacggatggagt 3
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 209 aagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 196 aagcaaaaactcaaaatcccttatattatgggacggagggagt 238
Score = 50.1 bits (25), Expect = 2e-05
Identities = 62/72 (86%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||| ||| | | ||||||||||||| |||||||||||||| |||| |||
Sbjct: 240 gtactccctccgtcccataatataagggatttt--gagtttttgcttactttgtttgacc 183
Query: 69 actcgtcttatt 80
||||||||||||
Sbjct: 182 actcgtcttatt 171
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 213 aaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 aaaaacttaaaatcccttatattatgggacggagggagt 239
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||| |||||||| |||||| ||||||| ||| |||||||||||
Sbjct: 63 cgagtggtcaaacagtgcaaacaaaaactcaaaatcccttatatcatgagacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
>RF01058;MIR806;AAAA02015956.1/1-242 39946:Oryza sativa Indica Group
Length = 242
Score = 67.9 bits (34), Expect = 7e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 210 agcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 44 agcaaaaactcaaaatcccttatattatgggacggagggagt 3
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 213 aaaaacttaaaatctcttatattatgggacggagggagt 251
||||||| |||||| |||||||||||||||||||||||
Sbjct: 202 aaaaactcaaaatcctttatattatgggacggagggagt 240
>RF01058;MIR806;AAAA02025608.1/3618-3384 39946:Oryza sativa Indica
Group
Length = 235
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 188 tgcaagcaaaaactcaaaatccgttatattatgggacggagggagt 233
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||| ||||||||||||||||||||||||||
Sbjct: 33 aaaaactcttatattatgggacggagggagt 3
>RF01058;MIR806;AACV01010328.1/26487-26725 39947:Oryza sativa
Japonica Group
Length = 239
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| |||||| ||||||||||| ||||||||||||
Sbjct: 192 tgcaagcaaaaactcaaaatcccttatattatgagacggagggagt 237
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||| |||||||| | |||| |||||||||||||| ||||||||
Sbjct: 63 cgagtggtcaaacagtgcaaacaaaaactcagaatcccttatattatgggatggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
>RF01058;MIR806;AAAA02011284.1/63255-63498 39946:Oryza sativa Indica
Group
Length = 244
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 48 tgcaagcaaaaaatcaaaatcccttatattatgggacggagggagt 3
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| ||||| | | ||| |||||| | ||||||||||||||||||||||||||||||
Sbjct: 182 cgagtggtcaaatggtacaaacaaaaaatcaaaatctcttatattatgggacggagggag 241
Query: 251 t 251
|
Sbjct: 242 t 242
>RF01058;MIR806;AAAA02017215.1/4773-5008 39946:Oryza sativa Indica
Group
Length = 236
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
||||| ||||||| | |||||||||||| |||||| ||||||||||| |||||||||||
Sbjct: 63 cgagtaatcaaacagtacaagcaaaaactcaaaatcccttatattatgagacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | ||| |||||||| |||||| |||||||||| ||||||||||||
Sbjct: 174 cgagtggtcaaacagtacaaacaaaaactcaaaatcccttatattataggacggagggag 233
Query: 251 t 251
|
Sbjct: 234 t 234
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttgag 45
|||||||||| ||||| | ||||||||||||||||
Sbjct: 235 tactccctccgtcctataatataagggattttgag 201
>RF01058;MIR806;AAAA02019268.1/24292-24529 39946:Oryza sativa Indica
Group
Length = 238
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagg 247
|||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||
Sbjct: 63 cgagtgatcaaagagtgcaaacaaaaactcaaaatcccttatattatgggacggagg 7
Score = 65.9 bits (33), Expect = 3e-10
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct: 177 cgagtggtcaaacagtgcaag-aaaaactcaaaatcccttatattatgggacggagggag 235
Query: 251 t 251
|
Sbjct: 236 t 236
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa Japonica
Group
Length = 242
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct: 63 cgagtggtcaaacagtgcaaataaaaactcaaaatcccttatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||| ||||| ||||||| |||||| |||||||||||| | |||||||||
Sbjct: 181 gagtggtcaaacaatgcaaataaaaactcaaaatcccttatattatggaatggagggagt 240
>RF01058;MIR806;AP008214.1/20963120-20962878 39947:Oryza sativa
Japonica Group
Length = 243
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||||||||| | |||||| |||||||||||||||||| ||||
Sbjct: 181 cgagtggtcaaacagtgcaagcaaaaagtcaaaatcccttatattatgggacggatggag 240
Query: 251 t 251
|
Sbjct: 241 t 241
>RF00906;MIR1122;AAAA02016804.1/14776-14638 39946:Oryza sativa
Indica Group
Length = 139
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||||||||
Sbjct: 103 taaaatctcttatattatgggacggagggagt 134
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||||||||
Sbjct: 104 taaaatctcttatattatgggacggagggagt 135
>RF00906;MIR1122;AP008215.1/17611882-17611726 39947:Oryza sativa
Japonica Group
Length = 157
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||||||||
Sbjct: 121 taaaatctcttatattatgggacggagggagt 152
>RF00906;MIR1122;AC134348.2/54043-54161 39947:Oryza sativa Japonica
Group
Length = 119
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||||||||
Sbjct: 83 taaaatctcttatattatgggacggagggagt 114
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 209 aagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| |||||| |||||||||||||||| |||||||
Sbjct: 192 aagcaaaaactcaaaatcccttatattatgggacgtagggagt 234
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||||| |||||| |||||||||||| |||||||||||
Sbjct: 48 tgcaaacaaaaactcaaaatcccttatattatggaacggagggagt 3
Score = 50.1 bits (25), Expect = 2e-05
Identities = 47/52 (90%), Gaps = 3/52 (5%)
Strand = Plus / Minus
Query: 30 tataagggattttgagagtttttgcttaca-acgtttaccactcgtcttatt 80
||||||||||||| ||||||||||||||| || || |||||||||||||||
Sbjct: 216 tataagggatttt--gagtttttgcttacacactttgaccactcgtcttatt 167
>RF01058;MIR806;AAAA02031014.1/26426-26184 39946:Oryza sativa Indica
Group
Length = 243
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 209 aagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 45 aagcaaaaagtcaaaatcccttatattatgggacggagggagt 3
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 213 aaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||||| ||||||||||||||||||||||||
Sbjct: 203 aaaaagttaaaatcccttatattatgggacggagggagt 241
>RF01058;MIR806;AAAA02029257.1/2286-2054 39946:Oryza sativa Indica
Group
Length = 233
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 213 aaaaacttaaaatctcttatattatgggacggagggagt 251
||||||| |||||| ||||||||||||||||||||||||
Sbjct: 41 aaaaactcaaaatcccttatattatgggacggagggagt 3
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 213 aaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| || ||||||||||||||||||||||||
Sbjct: 193 aaaaacttaaagtcccttatattatgggacggagggagt 231
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 209 aagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||| |||||||| |||||||||||| |||||||||||
Sbjct: 45 aagcaaaaagttaaaatcccttatattatggaacggagggagt 3
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 193 agtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||| |||||| |||||| ||||| |||||||| |||||||||||| ||||||||||
Sbjct: 183 agtggtcaaacagtgcaagtaaaaagttaaaatcccttatattatggaacggagggag 240
>RF00906;MIR1122;AP003948.2/13023-12867 39947:Oryza sativa Japonica
Group
Length = 157
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||||||||||||||||||||||||||||
Sbjct: 122 aaaatctcttatattatgggacggagggagt 152
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||||||||||||||||||||||||||||
Sbjct: 83 aaaatctcttatattatgggacggagggagt 113
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
>RF00906;MIR1122;AAAA02005800.1/23183-23322 39946:Oryza sativa
Indica Group
Length = 140
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 217 acttaaaatctcttatattatgggacggagggagt 251
|||||||||||||||||||||| ||||||||||||
Sbjct: 101 acttaaaatctcttatattatgagacggagggagt 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 28 ttatattatgggacggagggagt 6
>RF00906;MIR1122;AP008215.1/3184216-3184308 39947:Oryza sativa
Japonica Group
Length = 93
Score = 61.9 bits (31), Expect = 4e-09
Identities = 38/39 (97%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 213 aaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 51 aaaaacttaaaatc-cttatattatgggacggagggagt 88
>RF01058;MIR806;AAAA02014047.1/6193-6435 39946:Oryza sativa Indica
Group
Length = 243
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||| ||||| | |||||| ||||||||||||||||||||||||
Sbjct: 196 tgcaagtaaaaagtcaaaatcccttatattatgggacggagggagt 241
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||||| |||||||
Sbjct: 33 aaaatcccttatattatgggacgaagggagt 3
>RF01058;MIR806;AAAA02000839.1/35471-35708 39946:Oryza sativa Indica
Group
Length = 238
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 214 aaaacttaaaatctcttatattatgggacggagggagt 251
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 40 aaaactcaaaatcccttatattatgggacggagggagt 3
Score = 48.1 bits (24), Expect = 6e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||| ||||| | |||||| |||||| ||| |||||| |||||||||||||
Sbjct: 177 gagtggtcaaacaatgcaaactaaaactcaaaatcccttgtattataggacggagggagt 236
>RF01058;MIR806;AAAA02003762.1/8891-8652 39946:Oryza sativa Indica
Group
Length = 240
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | ||| |||||||| |||||| ||||||||||||||||| |||||
Sbjct: 178 cgagtggtcaaacagttcaaccaaaaactcaaaatcccttatattatgggacggggggag 237
Query: 251 t 251
|
Sbjct: 238 t 238
>RF01058;MIR806;AACV01009412.1/1317-1556 39947:Oryza sativa Japonica
Group
Length = 240
Score = 58.0 bits (29), Expect = 7e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagg 247
|||||| |||||| ||||||||||| | |||||| ||||||||||||||||||||
Sbjct: 178 cgagtggtcaaacagtgcaagcaaaatatcaaaatcccttatattatgggacggagg 234
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 48 tgcaagcaaaatatcaaaatcccttatattaggggacggagggagt 3
>RF01058;MIR806;AAAA02032415.1/3027-2786 39946:Oryza sativa Indica
Group
Length = 242
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| |||||| |||| | |||||||||||||||| |||||||||||||
Sbjct: 180 cgagtggtcaaacagtgcaagtaaaatatcaaaatctcttatattaggggacggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
>RF01058;MIR806;AP005719.3/82355-82591 39947:Oryza sativa Japonica
Group
Length = 237
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
||||||||||||| ||||| ||||| | |||||| ||||||||| |||||||||||||
Sbjct: 63 cgagtgatcaaacagtgcaaacaaaatgtcaaaatcccttatattaggggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||||||||| | |||||| ||||||||| |||| ||||||||
Sbjct: 175 cgagtggtcaaacaatgcaagcaaaatgtcaaaatcccttatattaggggatggagggag 234
Query: 251 t 251
|
Sbjct: 235 t 235
>RF01058;MIR806;AAAA02022366.1/8512-8275 39946:Oryza sativa Indica
Group
Length = 238
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| | |||||||||||| |||||| |||||||| |||||| |||||||
Sbjct: 63 cgagtggtcaaacactacaagcaaaaactcaaaatcccttatattgtgggacagagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/74 (85%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 11 tactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acca 69
||||||||| ||| ||| ||||||||||||| |||||||||||| | |||| ||||
Sbjct: 2 tactccctctgtcccacaatataagggatttt--gagtttttgcttgtagtgtttgacca 59
Query: 70 ctcgtcttatttaa 83
||||||||||||||
Sbjct: 60 ctcgtcttatttaa 73
>RF01058;MIR806;AACV01026200.1/8692-8927 39947:Oryza sativa Japonica
Group
Length = 236
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||||||||| ||||| ||||||| |||||| | |||||||||||||||||||||
Sbjct: 63 cgagtgatcaaagagtgcaaataaaaactcaaaatcccatatattatgggacggagggag 4
Query: 251 t 251
|
Sbjct: 3 t 3
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| || || |||||||| |||||| |||||||||||||||||| ||||
Sbjct: 174 cgagtggtcaaacagtgtaaacaaaaactcaaaatcccttatattatgggacggatggag 233
Query: 251 t 251
|
Sbjct: 234 t 234
>RF00906;MIR1122;AAAA02000541.1/33642-33511 39946:Oryza sativa
Indica Group
Length = 132
Score = 58.0 bits (29), Expect = 7e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 219 ttaaaatctcttatattatgggacggagggagt 251
|||||||||||||||||||||||||| ||||||
Sbjct: 95 ttaaaatctcttatattatgggacggtgggagt 127
>RF00906;MIR1122;AP008208.1/4007308-4007180 39947:Oryza sativa
Japonica Group
Length = 129
Score = 58.0 bits (29), Expect = 7e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggaggg 248
|||||||||||||||||||||||||||||
Sbjct: 95 taaaatctcttatattatgggacggaggg 123
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggaggga 249
|||||| ||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggaggga 8
>RF01062;MIR812;AC210489.1/6921-6765 4538:Oryza glaberrima (African
rice)
Length = 157
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||||||||||
Sbjct: 130 cgagtgatcaaacgttgcaagcaaaaac 157
>RF01062;MIR812;AACV01023580.1/13642-13468 39947:Oryza sativa
Japonica Group
Length = 175
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||||||||||
Sbjct: 28 cgagtgatcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AAAA02033862.1/2577-2751 39946:Oryza sativa Indica
Group
Length = 175
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||||||||||
Sbjct: 148 cgagtgatcaaacgttgcaagcaaaaac 175
>RF01062;MIR812;AP008210.1/2457757-2457587 39947:Oryza sativa
Japonica Group
Length = 171
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||||||||||
Sbjct: 144 cgagtgatcaaacgttgcaagcaaaaac 171
>RF01062;MIR812;AAAA02030638.1/19667-19840 39946:Oryza sativa Indica
Group
Length = 174
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||||||||||
Sbjct: 147 cgagtgatcaaacgttgcaagcaaaaac 174
>RF01062;MIR812;AAAA02006907.1/61212-61384 39946:Oryza sativa Indica
Group
Length = 173
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||||||||||
Sbjct: 28 cgagtgatcaaacgttgcaagcaaaaac 1
>RF01058;MIR806;AP008214.1/15639424-15639183 39947:Oryza sativa
Japonica Group
Length = 242
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 212 caaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 42 caaaaactcaaaatcccttatattatgggacggagagagt 3
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa Indica
Group
Length = 110
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 74 taaaatcccttatattatgggacggagggagt 105
>RF00906;MIR1122;AAAA02021990.1/33218-33084 39946:Oryza sativa
Indica Group
Length = 135
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 37 taaaatcgcttatattatgggacggagggagt 6
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||| |||||||||||||
Sbjct: 99 taaaatcccttatattattggacggagggagt 130
>RF00906;MIR1122;AACV01010673.1/7331-7451 39947:Oryza sativa
Japonica Group
Length = 121
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 85 taaaatcccttatattatgggacggagggagt 116
>RF00906;MIR1122;AAAA02015085.1/16920-17040 39946:Oryza sativa
Indica Group
Length = 121
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 37 taaaatcacttatattatgggacggagggagt 6
>RF00906;MIR1122;AAAA02021973.1/23033-22904 39946:Oryza sativa
Indica Group
Length = 130
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||||| |||||||||||||
Sbjct: 37 taaaatctcttatattataggacggagggagt 6
>RF00906;MIR1122;AP005198.3/50116-50271 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||||||||| |||||||||
Sbjct: 120 taaaatctcttatattatgggatggagggagt 151
>RF00906;MIR1122;AAAA02023860.1/3747-3613 39946:Oryza sativa Indica
Group
Length = 135
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 37 taaaatcccttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||||||| ||||| |||||
Sbjct: 100 aaaatctcttatattatggaacggatggagt 130
>RF00906;MIR1122;AAAA02004166.1/9974-9858 39946:Oryza sativa Indica
Group
Length = 117
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| |||||||||||||||
Sbjct: 37 taaaatctcttatattttgggacggagggagt 6
>RF00906;MIR1122;AAAA02014561.1/46160-46023 39946:Oryza sativa
Indica Group
Length = 138
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||||| |||||||||||||
Sbjct: 37 taaaatctcttatattatcggacggagggagt 6
>RF00906;MIR1122;AACV01016185.1/13649-13778 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||||| |||||||||||||
Sbjct: 37 taaaatctcttatattataggacggagggagt 6
>RF00906;MIR1122;AP000364.1/54072-53981 39947:Oryza sativa Japonica
Group
Length = 92
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagg 247
||||||||||||||||||||||||||||
Sbjct: 56 taaaatctcttatattatgggacggagg 83
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 224 atctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||||
Sbjct: 33 atctcttatattatgggacggagggagt 6
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||||||||||||||| |||||||||||
Sbjct: 107 aaatctcttatattatgaaacggagggagt 136
>RF00906;MIR1122;AP008216.1/5042324-5042220 39947:Oryza sativa
Japonica Group
Length = 105
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 69 taaaatcccttatattatgggacggagggagt 100
>RF00906;MIR1122;AP004994.2/6845-6714 39947:Oryza sativa Japonica
Group
Length = 132
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 96 taaaatcccttatattatgggacggagggagt 127
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggag 246
|||||| |||||||||||||||||||
Sbjct: 32 aaaatcccttatattatgggacggag 7
>RF00906;MIR1122;CR855038.1/146938-146783 4530:Oryza sativa (rice)
Length = 156
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||||||||
Sbjct: 120 taaaatcccttatattatgggacggagggagt 151
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||| |||||||||
Sbjct: 36 aaaatcccttatattatgggatggagggagt 6
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 gtactccctccatcctacagtataagggattttg 43
||||||||||||||| | | ||||||||||||||
Sbjct: 4 gtactccctccatcccataatataagggattttg 37
>RF01062;MIR812;AACV01023991.1/981-810 39947:Oryza sativa Japonica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtttttgcttacaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AAAA02007251.1/7007-6836 39946:Oryza sativa Indica
Group
Length = 172
Score = 54.0 bits (27), Expect = 1e-06
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||||||||| |||||||||||||||
Sbjct: 172 gtttttgcttacaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AAAA02011387.1/17306-17134 39946:Oryza sativa
Indica Group
Length = 173
Score = 54.0 bits (27), Expect = 1e-06
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtttttgcttacaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AAAA02011062.1/27832-28005 39946:Oryza sativa Indica
Group
Length = 174
Score = 54.0 bits (27), Expect = 1e-06
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||||||||| |||||||||||||||
Sbjct: 174 gtttttgcttacaacgtttgaccactcgtcttatt 140
>RF01058;MIR806;AP008213.1/28335111-28335353 39947:Oryza sativa
Japonica Group
Length = 243
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 209 aagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| |||||| |||||||||| ||||||||||||
Sbjct: 45 aagcaaaaactcaaaatcccttatattattagacggagggagt 3
Score = 50.1 bits (25), Expect = 2e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagg 247
|||||| |||||| ||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 181 cgagtggtcaaacagtgcaaacaaaaactcaaaattccttatattatgggatggagg 237
>RF01058;MIR806;AP004672.3/59439-59196 39947:Oryza sativa Japonica
Group
Length = 244
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 205 ttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
|||||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 49 ttgcaagcaaaatgtcaaaatcccttatattaggggacggagggagt 3
>RF00906;MIR1122;AAAA02018504.1/8341-8217 39946:Oryza sativa Indica
Group
Length = 125
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
>RF00906;MIR1122;AAAA02029602.1/21868-22024 39946:Oryza sativa
Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 122 aaaatcccttatattatgggacggagggagt 152
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| |||||||||||||||| |||||||
Sbjct: 35 aaatcccttatattatgggacgaagggagt 6
>RF00906;MIR1122;AAAA02030950.1/26939-26775 39946:Oryza sativa
Indica Group
Length = 165
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 130 aaaatcccttatattatgggacggagggagt 160
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 28 ttatattatgggacggagggagt 6
>RF00906;MIR1122;AACV01010090.1/14054-14174 39947:Oryza sativa
Japonica Group
Length = 121
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 94 ttatattatgggacggagggagt 116
>RF00906;MIR1122;AC215729.1/5950-6041 4537:Oryza punctata
Length = 92
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagg 247
|||||| ||||||||||||||||||||
Sbjct: 57 aaaatcccttatattatgggacggagg 83
>RF00906;MIR1122;AAAA02001985.1/22841-22997 39946:Oryza sativa
Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagg 247
|||||||||||||||||||||| |||||
Sbjct: 121 taaaatctcttatattatgggatggagg 148
>RF00906;MIR1122;AAAA02005900.1/34221-34065 39946:Oryza sativa
Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 122 aaaatcccttatattatgggacggagggagt 152
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||| |||||||||||||||
Sbjct: 100 aaaatctcttatattttgggacggagggagt 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||| |||||||||||||||
Sbjct: 36 aaaatcccttatattttgggacggagggagt 6
>RF00906;MIR1122;AP005612.3/100916-100800 39947:Oryza sativa
Japonica Group
Length = 117
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||||| |||||
Sbjct: 82 aaaatctcttatattatgggacggaaggagt 112
>RF00906;MIR1122;ABRL01001744.1/6692-6848 65489:Oryza barthii
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||||| |||||
Sbjct: 122 aaaatctcttatattatgggacggaaggagt 152
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| ||||||||||||||||||| ||||
Sbjct: 35 aaatcccttatattatgggacggagagagt 6
>RF00906;MIR1122;AP008212.1/5825633-5825757 39947:Oryza sativa
Japonica Group
Length = 125
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 90 aaaatcccttatattatgggacggagggagt 120
>RF00906;MIR1122;AP003842.5/108129-107973 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 122 aaaatcccttatattatgggacggagggagt 152
>RF00906;MIR1122;AP008215.1/10902261-10902381 39947:Oryza sativa
Japonica Group
Length = 121
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 86 aaaatcccttatattatgggacggagggagt 116
>RF00906;MIR1122;AAAA02017484.1/6201-6342 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 107 aaaatcccttatattatgggacggagggagt 137
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||||||||||||||||
Sbjct: 37 taaaatccgttatattatgggacggagggagt 6
>RF00906;MIR1122;AACV01014515.1/3255-3390 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 217 acttaaaatctcttatattatgggacggagggagt 251
|||||||||| |||||| |||||||||||||||||
Sbjct: 40 acttaaaatcccttataatatgggacggagggagt 6
>RF00906;MIR1122;AP004885.3/67265-67119 39947:Oryza sativa Japonica
Group
Length = 147
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||| |||||||||||||||||||||||||
Sbjct: 112 aaaatttcttatattatgggacggagggagt 142
>RF00906;MIR1122;AACV01022450.1/23564-23424 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 106 aaaatcccttatattatgggacggagggagt 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||| ||||||||
Sbjct: 36 aaaatcgcttatattatgggacagagggagt 6
>RF00906;MIR1122;AAAA02020252.1/431-548 39946:Oryza sativa Indica
Group
Length = 118
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 83 aaaatcgcttatattatgggacggagggagt 113
>RF00906;MIR1122;AP008216.1/22670503-22670626 39947:Oryza sativa
Japonica Group
Length = 124
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||| |||||||||||||||
Sbjct: 89 aaaatctcttatattttgggacggagggagt 119
>RF00906;MIR1122;AC140005.2/42932-42813 39947:Oryza sativa Japonica
Group
Length = 120
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 85 aaaatcccttatattatgggacggagggagt 115
>RF00906;MIR1122;AAAA02023828.1/150-266 39946:Oryza sativa Indica
Group
Length = 117
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 82 aaaatcccttatattatgggacggagggagt 112
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||| |||||||||||||||||
Sbjct: 36 aaaatcccttataatatgggacggagggagt 6
>RF00906;MIR1122;AP004687.2/98890-98773 39947:Oryza sativa Japonica
Group
Length = 118
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 83 aaaatcccttatattatgggacggagggagt 113
>RF00906;MIR1122;AP002865.1/97444-97566 39947:Oryza sativa Japonica
Group
Length = 123
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 88 aaaatcccttatattatgggacggagggagt 118
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 77 aaaatcccttatattatgggacggagggagt 107
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagt 6
>RF00906;MIR1122;AC090120.8/86565-86433 4530:Oryza sativa (rice)
Length = 133
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 98 aaaatcccttatattatgggacggagggagt 128
>RF00906;MIR1122;AAAA02020253.1/35204-35082 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 88 aaaatcgcttatattatgggacggagggagt 118
>RF00906;MIR1122;AACV01015661.1/3431-3301 39947:Oryza sativa
Japonica Group
Length = 131
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||| |||||||||||||||||||||||||
Sbjct: 36 aaaatatcttatattatgggacggagggagt 6
>RF00906;MIR1122;AC123518.2/65954-65790 39947:Oryza sativa Japonica
Group
Length = 165
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 138 ttatattatgggacggagggagt 160
>RF00906;MIR1122;AAAA02020362.1/853-722 39946:Oryza sativa Indica
Group
Length = 132
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 97 aaaatcccttatattatgggacggagggagt 127
>RF00906;MIR1122;AC027658.1/92773-92617 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||||||||||||||||
Sbjct: 121 taaaatcaattatattatgggacggagggagt 152
>RF00906;MIR1122;AAAA02032829.1/30310-30153 39946:Oryza sativa
Indica Group
Length = 158
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 123 aaaatcccttatattatgggacggagggagt 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagg 247
|||||| ||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagg 10
>RF00906;MIR1122;AAAA02003361.1/12742-12901 39946:Oryza sativa
Indica Group
Length = 160
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||| |||||||||||||||||||||||||
Sbjct: 36 aaaatttcttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||| |||||||||
Sbjct: 125 aaaatcccttatattatgggatggagggagt 155
>RF00906;MIR1122;AACV01024035.1/14460-14553 39947:Oryza sativa
Japonica Group
Length = 94
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 59 aaaatcccttatattatgggacggagggagt 89
>RF00906;MIR1122;AP008211.1/23389262-23389121 39947:Oryza sativa
Japonica Group
Length = 142
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 107 aaaatcccttatattatgggacggagggagt 137
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 28 ttatattatgggacggagggagt 6
>RF00906;MIR1122;AACV01018737.1/24214-24370 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
>RF00906;MIR1122;AP004706.3/101051-100895 39947:Oryza sativa
Japonica Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 122 aaaatcccttatattatgggacggagggagt 152
>RF00906;MIR1122;AL606607.3/13860-13742 39947:Oryza sativa Japonica
Group
Length = 119
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 92 ttatattatgggacggagggagt 114
>RF00906;MIR1122;AP004891.4/64233-64389 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||||||||||||||||
Sbjct: 122 aaaatcccttatattatgggacggagggagt 152
>RF01062;MIR812;AP008215.1/22501411-22501583 39947:Oryza sativa
Japonica Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatttaa 83
|||||||||| |||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatttaa 38
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AACV01012425.1/11928-12097 39947:Oryza sativa
Japonica Group
Length = 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatttaa 83
|||||||||| |||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatttaa 38
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AACV01006063.1/27291-27465 39947:Oryza sativa
Japonica Group
Length = 175
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatttaa 83
||||||| ||||||||||| ||||||||||||||||||
Sbjct: 175 gtttttgtttacaacgtttgaccactcgtcttatttaa 138
>RF01062;MIR812;AP005807.3/11576-11404 39947:Oryza sativa Japonica
Group
Length = 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatttaa 83
|||| |||||||||||||| ||||||||||||||||||
Sbjct: 173 gtttgtgcttacaacgtttgaccactcgtcttatttaa 136
>RF01058;MIR806;AAAA02003871.1/18652-18886 39946:Oryza sativa Indica
Group
Length = 235
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 48 tgcaagcaaaatgtcaaaatcccttatattaggggacggagggagt 3
Score = 50.1 bits (25), Expect = 2e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||| ||||| | |||||| |||||||||||||||||||||||
Sbjct: 174 cgagtggtcaaacagtgcaaccaaaatgtcaaaatc-cttatattatgggacggagggag 232
Query: 251 t 251
|
Sbjct: 233 t 233
>RF01058;MIR806;AAAA02007190.1/17283-17525 39946:Oryza sativa Indica
Group
Length = 243
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 48 tgcaagcaaaatgtcaaaatcccttatattaagggacggagggagt 3
>RF00906;MIR1122;CT009735.1/55205-55297 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 226 ctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||
Sbjct: 63 ctcttatattatgggacggagggagt 88
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 226 ctcttatattatgggacggaggga 249
||||||||||||||||||||||||
Sbjct: 31 ctcttatattatgggacggaggga 8
>RF00906;MIR1122;DQ871219.1/56040-55948 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagttccat 256
||||||||||||||||||||||||| ||||
Sbjct: 64 tcttatattatgggacggagggagtaccat 93
>RF00906;MIR1122;AY013246.1/69877-69969 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 226 ctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||
Sbjct: 63 ctcttatattatgggacggagggagt 88
>RF00906;MIR1122;AJ234502.1/104-174 4513:Hordeum vulgare
Length = 71
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 226 ctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||
Sbjct: 41 ctcttatattatgggacggagggagt 66
>RF00906;MIR1122;FJ374604.1/80-162 4573:Aegilops speltoides
Length = 83
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 226 ctcttatattatgggacggagggagt 251
||||||||||||||||||||||||||
Sbjct: 31 ctcttatattatgggacggagggagt 6
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 226 ctcttatattatgggacggagggag 250
|||||||||||||||||||||||||
Sbjct: 53 ctcttatattatgggacggagggag 77
>RF00906;MIR1122;AACV01006039.1/12119-12209 39947:Oryza sativa
Japonica Group
Length = 91
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| ||||||||||||||||||||||||
Sbjct: 35 aaatcccttatattatgggacggagggagt 6
>RF00906;MIR1122;AACV01015246.1/27552-27707 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| ||||||||||||||||||||||||
Sbjct: 122 aaatcccttatattatgggacggagggagt 151
>RF00906;MIR1122;AC105731.2/34053-33963 39947:Oryza sativa Japonica
Group
Length = 91
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| ||||||||||||||||||||||||
Sbjct: 35 aaatcccttatattatgggacggagggagt 6
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| |||||||| |||||||||||||||
Sbjct: 57 aaatcccttatattgtgggacggagggagt 86
>RF00906;MIR1122;AAAA02001792.1/20100-20254 39946:Oryza sativa
Indica Group
Length = 155
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggag 250
|||||| |||||||||||||||||||||||
Sbjct: 36 aaaatcccttatattatgggacggagggag 7
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagg 247
||||||||||||||| |||||||||||
Sbjct: 120 aaaatctcttatattttgggacggagg 146
>RF00906;MIR1122;AC137993.2/27522-27654 39947:Oryza sativa Japonica
Group
Length = 133
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| ||||||||||||||||||||||||
Sbjct: 35 aaatcccttatattatgggacggagggagt 6
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 222 aaatctcttatattatgggacggagggagt 251
||||| |||||||||||||||||| |||||
Sbjct: 99 aaatcccttatattatgggacggatggagt 128
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 222 aaatctcttatattatgggacggagggagt 251
|||||||||||||||||| |||||||||||
Sbjct: 102 aaatctcttatattatggaacggagggagt 131
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 216 aacttaaaatctcttatattatgggacggagggagt 251
|||| ||||||||||||||||||| || ||||||||
Sbjct: 41 aactaaaaatctcttatattatggtacagagggagt 6
>RF01062;MIR812;ABRL01000707.1/2129-1958 65489:Oryza barthii
Length = 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 48 tttttgcttacaacgttt-accactcgtcttatttaa 83
||||||||| |||||||| ||||||||||||||||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttatttaa 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaa 217
|||||| ||||||||||||||||||||
Sbjct: 145 cgagtggtcaaacgttgcaagcaaaaa 171
>RF01062;MIR812;AY749282.1/500-327 40149:Oryza meridionalis
Length = 174
Score = 50.1 bits (25), Expect = 2e-05
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 48 tttttgcttacaacgttt-accactcgtcttatttaa 83
|||||||||||||||||| ||||||||| ||||||||
Sbjct: 173 tttttgcttacaacgtttgaccactcgttttatttaa 137
>RF01058;MIR806;AACV01004826.1/22071-22312 39947:Oryza sativa
Japonica Group
Length = 242
Score = 50.1 bits (25), Expect = 2e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggag 250
|||||| |||||| ||||||||||| | |||||| ||||||||| |||| ||||||||
Sbjct: 180 cgagtggtcaaacagtgcaagcaaaatgtcaaaatcccttatattaggggatggagggag 239
Query: 251 t 251
|
Sbjct: 240 t 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttgagagtttttgcttacaacgttt-acc 68
||||||||||||||| | ||||||||||||||| | |||||||| || |||| |||
Sbjct: 242 gtactccctccatcccctaatataagggattttgaca--ttttgcttgcactgtttgacc 185
Query: 69 actcgtcttatttaa 83
|||||||||||||||
Sbjct: 184 actcgtcttatttaa 170
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| | |||||| ||||||||| |||||| |||||||
Sbjct: 48 tgcaagcaaaatgtcaaaatcccttatattaggggacgaagggagt 3
>RF00906;MIR1122;EU626553.1/26077-25985 4572:Triticum urartu
Length = 93
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagt 88
>RF00906;MIR1122;EU835198.1/120580-120672 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagt 88
>RF00906;MIR1122;AJ507395.1/8084-8185 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 102
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagt 6
>RF00906;MIR1122;X80068.1/1038-939 4513:Hordeum vulgare
Length = 100
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagt 6
>RF00906;MIR1122;EF067844.1/469859-469776 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 84
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 226 ctcttatattatgggacggagggag 250
|||||||||||||||||||||||||
Sbjct: 31 ctcttatattatgggacggagggag 7
>RF00906;MIR1122;CT009625.1/19364-19456 37682:Aegilops tauschii
Length = 93
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagt 88
>RF00906;MIR1122;EU200767.1/2385-2293 37682:Aegilops tauschii
Length = 93
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 64 tcttatattatgggacggagggagt 88
>RF00906;MIR1122;ABRL01002360.1/2061-1952 65489:Oryza barthii
Length = 110
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttg 43
|||||||||||||||| | ||||||||||||||
Sbjct: 106 tactccctccatcctaaaatataagggattttg 74
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttg 43
|||||||||||||| | ||||||||||||||||
Sbjct: 153 tactccctccatcccatagtataagggattttg 121
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||| |||||||||||||||
Sbjct: 37 taaaatcccttatattttgggacggagggagt 6
>RF00906;MIR1122;AP008208.1/30008764-30008885 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 93 tcttatattatgggacggagggagt 117
>RF00906;MIR1122;AL442105.2/58754-58619 4530:Oryza sativa (rice)
Length = 136
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 219 ttaaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||||||| |||||
Sbjct: 99 ttaaaatttcttatattatgggacggatggagt 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||||||||||||| ||||||||| ||||
Sbjct: 36 aaaatctcttatattacgggacggagagagt 6
>RF00906;MIR1122;AAAA02022081.1/28856-28717 39946:Oryza sativa
Indica Group
Length = 140
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 8 tagtactccctccatcctacagtataagggattttga 44
||||||||||||||||||| | ||||||| |||||||
Sbjct: 2 tagtactccctccatcctaaaatataaggaattttga 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||| ||||| |||||||||
Sbjct: 105 aaaatctcttatattttgggatggagggagt 135
>RF00906;MIR1122;AAAA02007279.1/3361-3494 39946:Oryza sativa Indica
Group
Length = 134
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 105 tcttatattatgggacggagggagt 129
>RF00906;MIR1122;AAAA02027487.1/4806-4726 39946:Oryza sativa Indica
Group
Length = 81
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagt 6
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 52 tcttatattatgggacggagggagt 76
>RF00906;MIR1122;AACV01015388.1/34183-34313 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagttccat 256
|||||||||||||||||||||||| ||||
Sbjct: 103 cttatattatgggacggagggagtaccat 131
>RF00906;MIR1122;AAAA02035210.1/16587-16706 39946:Oryza sativa
Indica Group
Length = 120
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccatcctacagtataagggattttg 43
|||||||||||||||| | ||||||||||||||
Sbjct: 116 tactccctccatcctaaaatataagggattttg 84
>RF00906;MIR1122;AACV01020013.1/4046-4126 39947:Oryza sativa
Japonica Group
Length = 81
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagt 6
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 52 tcttatattatgggacggagggagt 76
>RF00906;MIR1122;AAAA02018547.1/31962-31829 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 2e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 219 ttaaaatctcttatattatgggacggagggagt 251
|||||||| ||||||||||||||| ||||||||
Sbjct: 38 ttaaaatcccttatattatgggacagagggagt 6
>RF00906;MIR1122;AP008207.1/1012082-1012198 39947:Oryza sativa
Japonica Group
Length = 117
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggagt 6
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 227 tcttatattatgggacggagggagt 251
|||||||||||||||||||||||||
Sbjct: 88 tcttatattatgggacggagggagt 112
>RF00906;MIR1122;AAAA02006934.1/24563-24655 39946:Oryza sativa
Indica Group
Length = 93
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggaggga 249
||||||||||||||| |||||||||||||
Sbjct: 36 aaaatctcttatattttgggacggaggga 8
>RF01062;MIR812;AAAA02003196.1/32277-32449 39946:Oryza sativa Indica
Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtgctcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AAAA02000569.1/44845-44673 39946:Oryza sativa Indica
Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 146 cgagtggtcaaacgttgcaagcaaaaac 173
>RF01062;MIR812;AAAA02025228.1/28145-27974 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP002538.2/42335-42164 39947:Oryza sativa Japonica
Group
Length = 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 145 cgagtggtcaaacgttgcaagcaaaaac 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 172 gtttttgcttgcaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AAAA02004436.1/4027-4199 39946:Oryza sativa Indica
Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 146 cgagtggtcaaacgttgcaagcaaaaac 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 173 gtttttgcttgcaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AP004738.3/117852-117676 39947:Oryza sativa Japonica
Group
Length = 177
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||||||||||||||||| |||||||
Sbjct: 28 cgagtgatcaaacgttgcaaacaaaaac 1
>RF01062;MIR812;AAAA02034869.1/21771-21600 39946:Oryza sativa Indica
Group
Length = 172
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||||||||| ||||||
Sbjct: 28 cgagtgatcaaacgttgcaagtaaaaac 1
>RF01062;MIR812;AACV01022520.1/58374-58200 39947:Oryza sativa
Japonica Group
Length = 175
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01013528.1/595-423 39947:Oryza sativa Japonica
Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP005098.4/149489-149327 39947:Oryza sativa
Japonica Group
Length = 163
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttattt 81
|||||||||| |||||||| ||||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttattt 36
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AP003450.3/144108-144282 39947:Oryza sativa Japonica
Group
Length = 175
Score = 48.1 bits (24), Expect = 6e-05
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 48 tttttgcttacaacgttt-accactcgtcttattta 82
||||||||| |||||||| |||||||||||||||||
Sbjct: 174 tttttgcttgcaacgtttgaccactcgtcttattta 139
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaa 217
|||||| ||||||||||||||||||||
Sbjct: 148 cgagtggtcaaacgttgcaagcaaaaa 174
>RF01062;MIR812;AAAA02010901.1/16278-16093 39946:Oryza sativa Indica
Group
Length = 186
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 159 cgagtggtcaaacgttgcaagcaaaaac 186
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 186 gtttttgcttgcaacgtttgaccactcgtcttatt 152
>RF01062;MIR812;AACV01011247.1/5926-6098 39947:Oryza sativa Japonica
Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP008208.1/3789206-3789378 39947:Oryza sativa
Japonica Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01013079.1/2108-2281 39947:Oryza sativa Japonica
Group
Length = 174
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 28 cgagtggtcaaacgttgcaagcaaaaac 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||||||| |||||||| |||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AP004632.3/138567-138739 39947:Oryza sativa Japonica
Group
Length = 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaac 218
|||||| |||||||||||||||||||||
Sbjct: 146 cgagtggtcaaacgttgcaagcaaaaac 173
>RF01058;MIR806;AL772417.3/14129-13890 4530:Oryza sativa (rice)
Length = 240
Score = 48.1 bits (24), Expect = 6e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 192 gagtgatcaaacgttgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||| |||||| ||| ||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 179 gagtggtcaaacagtgcgagcaaaatatcaaaatcccttatattaagggacggagggagt 238
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 206 tgcaagcaaaaacttaaaatctcttatattatgggacggagggagt 251
||||||||||| | |||||| |||||| || ||||||||||||||
Sbjct: 48 tgcaagcaaaatgtcaaaatcccttatactaggggacggagggagt 3
>RF00906;MIR1122;AF343492.1/1298-1206 58531:Aegilops speltoides
subsp. speltoides
Length = 93
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 227 tcttatattatgggacggagggag 250
||||||||||||||||||||||||
Sbjct: 30 tcttatattatgggacggagggag 7
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 66 ttatattatgggacggagggagt 88
>RF00906;MIR1122;AAAA02009744.1/2145-2299 39946:Oryza sativa Indica
Group
Length = 155
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||| |||||||||||||
Sbjct: 37 taaaatcccttatattataggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||| ||||||||||||
Sbjct: 120 aaaatcccttatattatgtgacggagggagt 150
>RF00906;MIR1122;AAAA02003711.1/12163-12287 39946:Oryza sativa
Indica Group
Length = 125
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagt 6
>RF00906;MIR1122;AL662954.2/81377-81511 39947:Oryza sativa Japonica
Group
Length = 135
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||||| ||| |||||||||
Sbjct: 37 taaaatctcttatattatcggatggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 108 ttatattatgggacggagggagt 130
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa Indica
Group
Length = 158
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||||| |||||||||||
Sbjct: 37 taaaatcccttatattatggaacggagggagt 6
>RF00906;MIR1122;AAAA02035091.1/6870-7011 39946:Oryza sativa Indica
Group
Length = 142
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 8 tagtactccctccatcctacagtataagggattttg 43
||||||||||||||||| | | ||||||||||||||
Sbjct: 141 tagtactccctccatcccataatataagggattttg 106
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||| |||||||||
Sbjct: 107 aaaatcccttatattatgggatggagggagt 137
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggag 250
||||| ||||||||| ||||||||||||||
Sbjct: 36 aaaatttcttatattttgggacggagggag 7
>RF00906;MIR1122;AACV01001911.1/38308-38471 39947:Oryza sativa
Japonica Group
Length = 164
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||| |||||||||
Sbjct: 129 aaaatcccttatattatgggatggagggagt 159
>RF00906;MIR1122;AAAA02027128.1/44166-44066 39946:Oryza sativa
Indica Group
Length = 101
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| |||||| ||||||||
Sbjct: 65 taaaatctcttatattttgggacagagggagt 96
>RF00906;MIR1122;AAAA02022570.1/2584-2456 39946:Oryza sativa Indica
Group
Length = 129
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 224 atctcttatattatgggacggagggagt 251
|||| |||||||||||||||||||||||
Sbjct: 97 atctattatattatgggacggagggagt 124
>RF00906;MIR1122;AACV01001639.1/6893-7021 39947:Oryza sativa
Japonica Group
Length = 129
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| ||||||||||||||
Sbjct: 93 taaaatctcttatatttagggacggagggagt 124
>RF00906;MIR1122;AACV01001688.1/277-406 39947:Oryza sativa Japonica
Group
Length = 130
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 102 cttatattatgggacggagggagt 125
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||| |||||||||||||
Sbjct: 36 aaaatcccttatattataggacggagggagt 6
>RF00906;MIR1122;AP008216.1/3083672-3083805 39947:Oryza sativa
Japonica Group
Length = 134
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||||| ||| ||||
Sbjct: 37 taaaatctcttatattatgggacagagagagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||| ||||||||
Sbjct: 99 aaaatctcttatattatgggatagagggagt 129
>RF00906;MIR1122;AAAA02002822.1/13589-13717 39946:Oryza sativa
Indica Group
Length = 129
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| ||||||||||||||
Sbjct: 93 taaaatctcttatatttagggacggagggagt 124
>RF00906;MIR1122;AL606688.3/14952-14867 39947:Oryza sativa Japonica
Group
Length = 86
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||| ||||||||
Sbjct: 50 taaaatcacttatattatgggacagagggagt 81
>RF00906;MIR1122;AL512542.2/7629-7514 4530:Oryza sativa (rice)
Length = 116
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||| |||||||||
Sbjct: 81 aaaatcccttatattatgggatggagggagt 111
>RF00906;MIR1122;AACV01016333.1/7217-7077 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 223 aatctcttatattatgggacggagggag 250
||||||||||||||||||||||| ||||
Sbjct: 34 aatctcttatattatgggacggacggag 7
>RF00906;MIR1122;AP008218.1/5877959-5877822 39947:Oryza sativa
Japonica Group
Length = 138
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| ||||||||||||||| ||||||||
Sbjct: 37 taaaatcccttatattatgggacagagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||| |||||||||||||
Sbjct: 103 aaaatcccttatattataggacggagggagt 133
>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa Japonica
Group
Length = 121
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| ||||||||||||||
Sbjct: 85 taaaatctcttatatttagggacggagggagt 116
>RF00906;MIR1122;AACV01012241.1/1523-1654 39947:Oryza sativa
Japonica Group
Length = 132
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||| ||||||||| |||||||||||||
Sbjct: 96 taaaatctgttatattataggacggagggagt 127
>RF00906;MIR1122;AC135427.3/71840-71709 39947:Oryza sativa Japonica
Group
Length = 132
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| |||||||||| ||||
Sbjct: 37 taaaatctcttatattttgggacggagagagt 6
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 gtactccctccatcctacagtataagggattttg 43
|||||| |||||||||| | ||||||||||||||
Sbjct: 129 gtactcactccatcctataatataagggattttg 96
>RF00906;MIR1122;AP004348.4/54604-54470 39947:Oryza sativa Japonica
Group
Length = 135
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||| |||||||||||||
Sbjct: 99 taaaatcccttatattattggacggagggagt 130
>RF00906;MIR1122;AP005313.3/33733-33833 39947:Oryza sativa Japonica
Group
Length = 101
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
|||||||||||||||| |||||| ||||||||
Sbjct: 65 taaaatctcttatattttgggacagagggagt 96
>RF00906;MIR1122;AP004123.3/86345-86268 39947:Oryza sativa Japonica
Group
Length = 78
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 50 cttatattatgggacggagggagt 73
>RF00906;MIR1122;AP003940.3/16183-16061 39947:Oryza sativa Japonica
Group
Length = 123
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagt 6
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 95 cttatattatgggacggagggagt 118
>RF00906;MIR1122;AP008211.1/22648108-22648219 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 6e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 228 cttatattatgggacggagggagt 251
||||||||||||||||||||||||
Sbjct: 29 cttatattatgggacggagggagt 6
>RF00906;MIR1122;AACV01022711.1/1348-1205 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||||||||||| |||||
Sbjct: 108 taaaatcccttatattatgggacggatggagt 139
>RF00906;MIR1122;AP004314.3/140580-140716 39947:Oryza sativa
Japonica Group
Length = 137
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||| |||||||||| |||||||||||||
Sbjct: 101 taaaatcccttatattattggacggagggagt 132
>RF00906;MIR1122;AL731884.4/124412-124271 4530:Oryza sativa (rice)
Length = 142
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 8 tagtactccctccatcctacagtataagggattttg 43
||||||||||||||||| | | ||||||||||||||
Sbjct: 2 tagtactccctccatcccataatataagggattttg 37
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||| |||||||||
Sbjct: 36 aaaatcccttatattatgggatggagggagt 6
>RF00906;MIR1122;AC084282.6/14827-14672 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 220 taaaatctcttatattatgggacggagggagt 251
||||||||||||||||| |||||||| |||||
Sbjct: 37 taaaatctcttatattacgggacggaaggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||| ||||||||||||||||
Sbjct: 121 aaaatcccttatatcatgggacggagggagt 151
>RF01062;MIR812;AAAA02018397.1/69188-69020 39946:Oryza sativa
Indica Group
Length = 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||| |||||||||||| |||||||||||||||
Sbjct: 1 gtttttacttacaacgtttgaccactcgtcttatt 35
Score = 44.1 bits (22), Expect = 0.001
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatttaa 83
|||||| ||| |||||||| ||||||||||||||||||
Sbjct: 169 gtttttacttgcaacgtttgaccactcgtcttatttaa 132
>RF01062;MIR812;AAAA02004453.1/14160-14328 39946:Oryza sativa Indica
Group
Length = 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaa 217
|||||||||||||||||||| ||||||
Sbjct: 142 cgagtgatcaaacgttgcaaacaaaaa 168
Score = 44.1 bits (22), Expect = 0.001
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatttaa 83
|||||||||| ||||||| ||||||||||||||||||
Sbjct: 1 gtttttgcttgtaacgtttgaccactcgtcttatttaa 38
>RF01062;MIR812;AAAA02001658.1/683-852 39946:Oryza sativa Indica
Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaac 218
|||||||||||| ||||||||||||||
Sbjct: 27 gagtgatcaaacattgcaagcaaaaac 1
>RF01062;MIR812;AAAA02004443.1/24290-24120 39946:Oryza sativa
Indica Group
Length = 171
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||| |||||||||||| |||||||||||||||
Sbjct: 1 gtttttccttacaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01025331.1/33364-33536 39947:Oryza sativa
Japonica Group
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaa 217
||||||||||||||||||||| |||||
Sbjct: 146 cgagtgatcaaacgttgcaagaaaaaa 172
>RF01062;MIR812;AAAA02011350.1/21929-21758 39946:Oryza sativa Indica
Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaac 218
||||||||||||||| |||||||||||
Sbjct: 27 gagtgatcaaacgttacaagcaaaaac 1
>RF01062;MIR812;AP005698.3/85213-85385 39947:Oryza sativa Japonica
Group
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Minus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||| ||||||||||| |||||||||||||||
Sbjct: 173 gtttttgtttacaacgtttgaccactcgtcttatt 139
>RF01062;MIR812;AP004330.3/32219-32048 39947:Oryza sativa Japonica
Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
|||||| |||||||||||| |||||||||||||||
Sbjct: 1 gtttttacttacaacgtttgaccactcgtcttatt 35
>RF01062;MIR812;AACV01006131.1/2219-2048 39947:Oryza sativa
Japonica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||||||||| ||| |||||||||||
Sbjct: 1 gtttttgcttacaacgtttgaccgctcgtcttatt 35
>RF01062;MIR812;AAAA02022622.1/23036-23207 39946:Oryza sativa Indica
Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaac 218
||||| |||||||||||||||||||||
Sbjct: 27 gagtggtcaaacgttgcaagcaaaaac 1
>RF01062;MIR812;AAAA02017093.1/21668-21840 39946:Oryza sativa
Indica Group
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttt-accactcgtcttatt 80
||||||||||||||||||| ||||||| |||||||
Sbjct: 1 gtttttgcttacaacgtttgaccactcatcttatt 35
>RF01062;MIR812;AACV01013318.1/11508-11337 39947:Oryza sativa
Japonica Group
Length = 172
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cgagtgatcaaacgttgcaagcaaaaa 217
|||||| ||||||||||||||||||||
Sbjct: 145 cgagtggtcaaacgttgcaagcaaaaa 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Minus
Query: 48 tttttgcttacaacgttt-accactcgtcttatt 80
||||||||| |||||||| |||||||||||||||
Sbjct: 171 tttttgcttgcaacgtttgaccactcgtcttatt 138
>RF01062;MIR812;AACV01003822.1/5854-6022 39947:Oryza sativa
Japonica Group
Length = 169
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttta-ccactcgtcttatt 80
|||||||||| ||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AAAA02006568.1/7398-7226 39946:Oryza sativa Indica
Group
Length = 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 47 gtttttgcttacaacgttta-ccactcgtcttatt 80
|||||||||| ||||||||| ||||||||||||||
Sbjct: 1 gtttttgcttgcaacgtttaaccactcgtcttatt 35
>RF01062;MIR812;AP004689.3/74467-74305 39947:Oryza sativa Japonica
Group
Length = 163
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 195 tgatcaaacgttgcaagcaaaaa 217
|||||||||||||||||||||||
Sbjct: 24 tgatcaaacgttgcaagcaaaaa 2
>RF01062;MIR812;AAAA02021140.1/3763-3594 39946:Oryza sativa Indica
Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 192 gagtgatcaaacgttgcaagcaaaaac 218
||||| |||||||||||||||||||||
Sbjct: 144 gagtggtcaaacgttgcaagcaaaaac 170
>RF01062;MIR812;AACV01016994.1/6652-6822 39947:Oryza sativa Japonica
Group
Length = 171
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 192 gagtgatcaaacgttgcaagcaaaaac 218
||||| |||||||||||||||||||||
Sbjct: 27 gagtggtcaaacgttgcaagcaaaaac 1
>RF01058;MIR806;AP008210.1/18547508-18547751 39947:Oryza sativa
Japonica Group
Length = 244
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||| ||||||||||||||
Sbjct: 33 aaaatcccttatattaggggacggagggagt 3
>RF00906;MIR1122;EU626553.1/80596-80503 4572:Triticum urartu
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||| ||||| |||||||||||||||||||
Sbjct: 59 aaaatgtcttacattatgggacggagggagt 89
>RF00906;MIR1122;EF426564.1/124146-124054 4571:Triticum turgidum
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||| |||||| |||||||||||||||||||
Sbjct: 36 aaaacctcttacattatgggacggagggagt 6
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 66 ttatattatgggacggagggagt 88
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 226 ctcttatattatgggacggagggagt 251
|||||||||||||| |||||||||||
Sbjct: 31 ctcttatattatggaacggagggagt 6
>RF00906;MIR1122;AAAA02018804.1/15100-15261 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||| | |||||||||||||
Sbjct: 127 aaaatctcttatattttaggacggagggagt 157
>RF00906;MIR1122;CR855030.1/34146-34260 4530:Oryza sativa (rice)
Length = 115
Score = 46.1 bits (23), Expect = 2e-04
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||||| |||||||||||||
Sbjct: 81 aaaatctcttatattat-ggacggagggagt 110
>RF00906;MIR1122;AAAA02034555.1/16647-16527 39946:Oryza sativa
Indica Group
Length = 121
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||| |||||||||||||||
Sbjct: 69 aaaatcccttatattttgggacggagggagt 39
>RF00906;MIR1122;AAAA02021919.1/27572-27694 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 28 ttatattatgggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| ||||||||||| ||||||||||||
Sbjct: 88 aaaatcccttatattatgtgacggagggagt 118
>RF00906;MIR1122;AAAA02000785.1/4986-5079 39946:Oryza sativa Indica
Group
Length = 94
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||| |||||||||||||
Sbjct: 36 aaaatcccttatattataggacggagggagt 6
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||||||||| ||||||||
Sbjct: 59 aaaatctcttatattatgggagagagggagt 89
Score = 44.1 bits (22), Expect = 0.001
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 gtactccctccatcctacagtataagggattttg 43
||||||||||| ||||| | ||||||||||||||
Sbjct: 4 gtactccctccgtcctataatataagggattttg 37
>RF00906;MIR1122;DQ454157.1/29550-29395 39947:Oryza sativa Japonica
Group
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
||||||||||||||| ||||||||||||||
Sbjct: 121 aaaatctcttatatttagggacggagggagt 151
>RF00906;MIR1122;AAAA02015040.1/10135-10264 39946:Oryza sativa
Indica Group
Length = 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| |||||||||||||||| |||||||
Sbjct: 95 aaaatcccttatattatgggacgaagggagt 125
>RF00906;MIR1122;AAAA02005311.1/24621-24777 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 ttatattatgggacggagggagt 251
|||||||||||||||||||||||
Sbjct: 130 ttatattatgggacggagggagt 152
Score = 44.1 bits (22), Expect = 0.001
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 230 tatattatgggacggagggagt 251
||||||||||||||||||||||
Sbjct: 27 tatattatgggacggagggagt 6
>RF00906;MIR1122;AACV01018155.1/14353-14197 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 221 aaaatctcttatattatgggacggagggagt 251
|||||| | ||||||||||||||||||||||
Sbjct: 36 aaaatcccgtatattatgggacggagggagt 6
