miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47874_ath-miRf10774-akr:pmrd
Length = 98
Score = 141 bits (71), Expect = 1e-34
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 1 tagggaatatcttgatctttccaccatctacaaagaatnnnnnnnnngcttccaatatta 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tagggaatatcttgatctttccaccatctacaaagaataaaaaaaaagcttccaatatta 60
Query: 61 ctaggtatttggtggtggaaagatcaagatattcctta 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaggtatttggtggtggaaagatcaagatattcctta 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 tggtggaaagatcaagatattcc 95
|||||||||||||||||||||||
Sbjct: 26 tggtggaaagatcaagatattcc 4
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 ggaatatcttgatctttccacca 26
|||||||||||||||||||||||
Sbjct: 95 ggaatatcttgatctttccacca 73
>47875_ath-miRf10775-akr:pmrd
Length = 96
Score = 137 bits (69), Expect = 2e-33
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 2 agggaatatcttgatctttccaccatctacaaagaatnnnnnnnnngcttccaatattac 61
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 agggaatatcttgatctttccaccatctacaaagaataaaaaaaaagcttccaatattac 60
Query: 62 taggtatttggtggtggaaagatcaagatattcctt 97
||||||||||||||||||||||||||||||||||||
Sbjct: 61 taggtatttggtggtggaaagatcaagatattcctt 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 tggtggaaagatcaagatattcc 95
|||||||||||||||||||||||
Sbjct: 25 tggtggaaagatcaagatattcc 3
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 ggaatatcttgatctttccacca 26
|||||||||||||||||||||||
Sbjct: 94 ggaatatcttgatctttccacca 72
