miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47963_ath-miRf10863-akr:pmrd
Length = 139
Score = 248 bits (125), Expect = 8e-67
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 caagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaactttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 caagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaactttctat 67
Query: 61 ggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaactgcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaactgcaact 127
Query: 121 gcttg 125
|||||
Sbjct: 128 gcttg 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 102 tatctctgcaactgcaactgcttg 125
||||| ||||||||||||||||||
Sbjct: 31 tatctttgcaactgcaactgcttg 8
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 caagcagttgcagttgcaaagata 24
|||||||||||||||||| |||||
Sbjct: 132 caagcagttgcagttgcagagata 109
>47678_ath-miRf10578-akr:pmrd
Length = 143
Score = 248 bits (125), Expect = 8e-67
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1 caagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaactttctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 caagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaactttctat 75
Query: 61 ggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaactgcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaactgcaact 15
Query: 121 gcttg 125
|||||
Sbjct: 14 gcttg 10
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 caagcagttgcagttgcaaagata 24
|||||||||||||||||| |||||
Sbjct: 10 caagcagttgcagttgcagagata 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 102 tatctctgcaactgcaactgcttg 125
||||| ||||||||||||||||||
Sbjct: 111 tatctttgcaactgcaactgcttg 134
