miRNEST 2.0, an integrative microRNA resource :: BLAST
>40217_ath-MIR2112:mirbase
Length = 154
Score = 289 bits (146), Expect = 3e-79
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1 gaaatgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gaaatgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgct 64
Query: 61 cagcgaaaacaacaaaatgtgaaaagggtttatcagaaacattggggtcatgatatacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cagcgaaaacaacaaaatgtgaaaagggtttatcagaaacattggggtcatgatatacct 124
Query: 121 ttatatccgcatttgcgcatcatctc 146
||||||||||||||||||||||||||
Sbjct: 125 ttatatccgcatttgcgcatcatctc 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 123 atatccgcatttgcgcatcat 143
|||||||||||||||||||||
Sbjct: 28 atatccgcatttgcgcatcat 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 4 atgatgcgcaaatgcggatat 24
|||||||||||||||||||||
Sbjct: 147 atgatgcgcaaatgcggatat 127
>40216_ath-MIR2112:mirbase
Length = 154
Score = 289 bits (146), Expect = 3e-79
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1 gaaatgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gaaatgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgct 64
Query: 61 cagcgaaaacaacaaaatgtgaaaagggtttatcagaaacattggggtcatgatatacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cagcgaaaacaacaaaatgtgaaaagggtttatcagaaacattggggtcatgatatacct 124
Query: 121 ttatatccgcatttgcgcatcatctc 146
||||||||||||||||||||||||||
Sbjct: 125 ttatatccgcatttgcgcatcatctc 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 123 atatccgcatttgcgcatcat 143
|||||||||||||||||||||
Sbjct: 28 atatccgcatttgcgcatcat 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 4 atgatgcgcaaatgcggatat 24
|||||||||||||||||||||
Sbjct: 147 atgatgcgcaaatgcggatat 127
>39948_aly-MIR2112:mirbase
Length = 152
Score = 204 bits (103), Expect = 1e-53
Identities = 138/152 (90%), Gaps = 12/152 (7%)
Strand = Plus / Plus
Query: 4 atgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgctcag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgctcag 60
Query: 64 cgaaaacaacaaaatgtgaaaagggtttatca------------gaaacattggggtcat 111
| |||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 61 caaaaacaacaaaatgcgaaaagggtttatcagaaacattatttgaaacattggggtcat 120
Query: 112 gatatacctttatatccgcatttgcgcatcat 143
||||||||||||||||||||||||||||||||
Sbjct: 121 gatatacctttatatccgcatttgcgcatcat 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 123 atatccgcatttgcgcatcat 143
|||||||||||||||||||||
Sbjct: 21 atatccgcatttgcgcatcat 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 4 atgatgcgcaaatgcggatat 24
|||||||||||||||||||||
Sbjct: 152 atgatgcgcaaatgcggatat 132
