miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48013_ath-miRf10913-akr:pmrd
          Length = 154

 Score =  289 bits (146), Expect = 3e-79
 Identities = 146/146 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaaatgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   gaaatgatgcgcaaatgcggatatcaatgtaaatcaggacaacaaaccaatagaggtgct 64

                                                                       
Query: 61  cagcgaaaacaacaaaatgtgaaaagggtttatcagaaacattggggtcatgatatacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  cagcgaaaacaacaaaatgtgaaaagggtttatcagaaacattggggtcatgatatacct 124

                                     
Query: 121 ttatatccgcatttgcgcatcatctc 146
           ||||||||||||||||||||||||||
Sbjct: 125 ttatatccgcatttgcgcatcatctc 150



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 123 atatccgcatttgcgcatcat 143
           |||||||||||||||||||||
Sbjct: 28  atatccgcatttgcgcatcat 8



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 4   atgatgcgcaaatgcggatat 24
           |||||||||||||||||||||
Sbjct: 147 atgatgcgcaaatgcggatat 127