miRNEST 2.0, an integrative microRNA resource :: BLAST
>40105_ath-MIR405d:mirbase
Length = 86
Score = 101 bits (51), Expect = 6e-23
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 1 ttaaatgagttatgggtt-gacccaacccatttaacaaaatgagttgggtcatcccataa 59
|||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||
Sbjct: 79 ttaaatgagttatgggttagacccaactcatttaacaaaatgagttgggtcaacccataa 20
Query: 60 ctcattt 66
|||||||
Sbjct: 19 ctcattt 13
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 3 aaatgagttatgggttgacccaacccatttaacaaaatgagttgggtc-atcccataact 61
|||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||
Sbjct: 13 aaatgagttatgggttgacccaactcattttgttaaatgagttgggtctaacccataact 72
Query: 62 catttaa 68
|||||||
Sbjct: 73 catttaa 79
>40103_ath-MIR405a:mirbase
Length = 157
Score = 101 bits (51), Expect = 6e-23
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 3 aaatgagttatgggtt-gacccaacccatttaacaaaatgagttgggtcatcccataact 61
|||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 118 aaatgagttatgggttagacccaactcatttaacaaaatgagttgggtcaacccataact 59
Query: 62 catttaa 68
|||||||
Sbjct: 58 catttaa 52
Score = 69.9 bits (35), Expect = 2e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 ttaaatgagttatgggttgacccaacccatttaacaaaatgagttgggtc-atcccataa 59
|||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||
Sbjct: 52 ttaaatgagttatgggttgacccaactcattttgttaaatgagttgggtctaacccataa 111
Query: 60 ctcattt 66
|||||||
Sbjct: 112 ctcattt 118
>40104_ath-MIR405b:mirbase
Length = 124
Score = 87.7 bits (44), Expect = 9e-19
Identities = 64/68 (94%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 3 aaatgagttatgggtt-gacccaacccatttaacaaaatgagttgggtc-atcccataac 60
|||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||
Sbjct: 33 aaatgagttatgggttagacccaactcatttaacaaaatgagttgggtctaacccataac 92
Query: 61 tcatttaa 68
||||||||
Sbjct: 93 tcatttaa 100
Score = 56.0 bits (28), Expect = 3e-09
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 1 ttaaatgagttatgggtt-gacccaacccatttaacaaaatgagttgggtc-atcccata 58
|||||||||||||||||| |||||||| ||||| |||||||||||||| | ||||||
Sbjct: 100 ttaaatgagttatgggttagacccaactcattttgttaaatgagttgggtctaacccata 41
Query: 59 actcattt 66
||||||||
Sbjct: 40 actcattt 33
