miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00893;MIR854;AL391731.1/32790-33015 3702:Arabidopsis thaliana
(thale cress)
Length = 226
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 9 actcgacctcggggtcgagtggtgaggtgaagtggtggtgtcttctactcgaccaggggg 68
|||||||| ||||||||| |||||| |||||| ||| ||| ||||||||| | ||||
Sbjct: 206 actcgaccagggggtcgaggggtgagatgaagttgtgaagtcccctactcgactaagggg 147
Query: 69 tcgagtggtctg 80
||||||||||||
Sbjct: 146 tcgagtggtctg 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 59/70 (84%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 54 tactcgaccagggggtcgagtggtctgctgaggttgtgaa-tcgtctactcgacctgggg 112
|||||||||||||||||||| ||| | ||| |||||||| || ||||||||| |||
Sbjct: 207 tactcgaccagggggtcgaggggtgagatgaagttgtgaagtcccctactcgactaaggg 148
Query: 113 gtcgagtggt 122
||||||||||
Sbjct: 147 gtcgagtggt 138
