miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47834_ath-miRf10734-akr:pmrd
          Length = 169

 Score =  315 bits (159), Expect = 6e-87
 Identities = 159/159 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaatctctatttcactccccacaaaatggaagttaatgtccagtttttccctaaatcgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gaatctctatttcactccccacaaaatggaagttaatgtccagtttttccctaaatcgaa 105

                                                                       
Query: 61  agtttgaattctaagagttcgtaagacttgttcgtttgatttgatctataatgaaattgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 agtttgaattctaagagttcgtaagacttgttcgtttgatttgatctataatgaaattgg 45

                                                  
Query: 121 actttaacttccattttgtggggactgagatagacattc 159
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 44  actttaacttccattttgtggggactgagatagacattc 6



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                    
Query: 1  gaatctctatttcactccccacaaaatggaagttaatgtcca 42
          |||| ||||| ||| ||||||||||||||||||||| |||||
Sbjct: 6  gaatgtctatctcagtccccacaaaatggaagttaaagtcca 47



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 118 tggactttaacttccattttgtggggactgagatagacattc 159
           ||||| ||||||||||||||||||||| ||| ||||| ||||
Sbjct: 123 tggacattaacttccattttgtggggagtgaaatagagattc 164