miRNEST 2.0, an integrative microRNA resource :: BLAST
>48116_ath-miRf11016-akr:pmrd
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
Query: 61 gtgtcagatcgacagtggaaggtgtcgatcgacaccatctctg 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtcagatcgacagtggaaggtgtcgatcgacaccatctctg 103
>47190_ath-miRf10090-akr:pmrd
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 2 agaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtaggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 agaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtaggg 42
Query: 62 tgtcagatcgacagtggaaggtgtcgatcgacaccatctct 102
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tgtcagatcgacagtggaaggtgtcgatcgacaccatctct 1
>47836_ath-miRf10736-akr:pmrd
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 3 gaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagggt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagggt 40
Query: 63 gtcagatcgacagtggaaggtgtcgatcgacaccatctc 101
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 gtcagatcgacagtggaaggtgtcgatcgacaccatctc 1
>47364_ath-miRf10264-akr:pmrd
Length = 84
Score = 67.9 bits (34), Expect = 1e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
|||||||||||||||||||||| ||||| || ||||||| ||||| || |||||||| |
Sbjct: 2 tagaggggtatcgatcgacaccgtcgtattgagtcgtctctgagaaaagggtcccgtatg 61
Query: 61 gtgtcagatcgaca 74
||||| ||||||||
Sbjct: 62 gtgtc-gatcgaca 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 ggtgtcgatcgacaccatctctg 103
|||||||||||||||||||||||
Sbjct: 61 ggtgtcgatcgacaccatctctg 83
>47363_ath-miRf10263-akr:pmrd
Length = 84
Score = 67.9 bits (34), Expect = 1e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
|||||||||||||||||||||| ||||| || ||||||| ||||| || |||||||| |
Sbjct: 2 tagaggggtatcgatcgacaccgtcgtattgagtcgtctctgagaaaagggtcccgtatg 61
Query: 61 gtgtcagatcgaca 74
||||| ||||||||
Sbjct: 62 gtgtc-gatcgaca 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 ggtgtcgatcgacaccatctctg 103
|||||||||||||||||||||||
Sbjct: 61 ggtgtcgatcgacaccatctctg 83
>48288_ath-miRf11188-akr:pmrd
Length = 96
Score = 61.9 bits (31), Expect = 8e-11
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
|||||||||||||||||||| | ||||| || |||||| ||| ||||| ||||| ||||
Sbjct: 19 tagaggggtatcgatcgacatcgtcgtattgagtcgtcttagaaaagagtgtcccatagg 78
Query: 61 gtgtcagatcgacagtgga 79
||||| |||||||| ||||
Sbjct: 79 gtgtc-gatcgacactgga 96
>47933_ath-miRf10833-akr:pmrd
Length = 96
Score = 61.9 bits (31), Expect = 8e-11
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
||||||||||||| |||||||| ||||| || ||||||| ||||| || |||||||| |
Sbjct: 19 tagaggggtatcggtcgacaccgtcgtattgagtcgtctctgagaaaagggtcccgtatg 78
Query: 61 gtgtcagatcgacagtgga 79
||||| |||||||| ||||
Sbjct: 79 gtgtc-gatcgacactgga 96
>47388_ath-miRf10288-akr:pmrd
Length = 96
Score = 61.9 bits (31), Expect = 8e-11
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
|||||||||||||||||||||| || || || ||||||| ||||| || |||||||| |
Sbjct: 19 tagaggggtatcgatcgacaccgtcatattgagtcgtctctgagaaaagagtcccgtatg 78
Query: 61 gtgtcagatcgacagtgga 79
||||| |||||||| ||||
Sbjct: 79 gtgtc-gatcgacactgga 96
>47324_ath-miRf10224-akr:pmrd
Length = 107
Score = 61.9 bits (31), Expect = 8e-11
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
||||||||||||| |||||||| ||||| || ||||||| ||||| || |||||||| |
Sbjct: 26 tagaggggtatcggtcgacaccgtcgtattgagtcgtctctgagaaaagggtcccgtatg 85
Query: 61 gtgtcagatcgacagtgga 79
||||| |||||||| ||||
Sbjct: 86 gtgtc-gatcgacactgga 103
>48212_ath-miRf11112-akr:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
||||||||||||||| |||||| ||||| | ||||||| ||||||||| |||| || |
Sbjct: 19 tagaggggtatcgattgacaccgtcgtatttagtcgtctctgagaagagcatcccctatg 78
Query: 61 gtgtcagatcgaca 74
||||| ||||||||
Sbjct: 79 gtgtc-gatcgaca 91
>47920_ath-miRf10820-akr:pmrd
Length = 112
Score = 52.0 bits (26), Expect = 8e-08
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
||||||||||||||| |||||| ||||| | ||||||| ||||||||| |||| || |
Sbjct: 86 tagaggggtatcgattgacaccgtcgtatttagtcgtctctgagaagagcatcccctatg 27
Query: 61 gtgtcagatcgaca 74
||||| ||||||||
Sbjct: 26 gtgtc-gatcgaca 14
>47629_ath-miRf10529-akr:pmrd
Length = 108
Score = 52.0 bits (26), Expect = 8e-08
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 tagaggggtatcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagg 60
||||||||||||||| |||||| ||||| | ||||||| ||||||||| |||| || |
Sbjct: 26 tagaggggtatcgattgacaccgtcgtatttagtcgtctctgagaagagcatcccctatg 85
Query: 61 gtgtcagatcgaca 74
||||| ||||||||
Sbjct: 86 gtgtc-gatcgaca 98
>47679_ath-miRf10579-akr:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 11 tcgatcgacaccttcgtactggctcgtctcagagaagagcgtcccgtagggtgtcagatc 70
|||||||||||| ||||| | |||||| ||||||||| || || ||||||||| ||||
Sbjct: 71 tcgatcgacaccgtcgtatggaatcgtcttagagaagagtgttccatagggtgtc-gatc 13
Query: 71 gacagtggaagg 82
|||| |||||||
Sbjct: 12 gacactggaagg 1
>48073_ath-miRf10973-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 80 aggtgtcgatcgacaccatc 99
||||||||||||||||||||
Sbjct: 72 aggtgtcgatcgacaccatc 53
