miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O49312|YUC7_ARATH Putative flavin-containing monooxygenase
          YUCCA7 OS=Arabidopsis thaliana GN=YUC7 PE=2 SV=1
          Length = 431

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +3

Query: 3  RCIWVNGPVIVGAGPSGLAVA 65
          RCIWVNGPVIVGAGPSGLAVA
Sbjct: 25 RCIWVNGPVIVGAGPSGLAVA 45




>sp|O23024|YUC3_ARATH Flavin-containing monooxygenase YUCCA3
          OS=Arabidopsis thaliana GN=YUC3 PE=2 SV=1
          Length = 437

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +3

Query: 3  RCIWVNGPVIVGAGPSGLAVA 65
          RCIWVNGPVIVGAGPSGLAVA
Sbjct: 30 RCIWVNGPVIVGAGPSGLAVA 50




>sp|Q9SVU0|YUC8_ARATH Flavin-containing monooxygenase YUCCA8
          OS=Arabidopsis thaliana GN=YUC8 PE=2 SV=1
          Length = 426

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = +3

Query: 3  RCIWVNGPVIVGAGPSGLAVA 65
          RCIWVNGPVIVGAGPSGLA A
Sbjct: 18 RCIWVNGPVIVGAGPSGLATA 38




>sp|Q9LKC0|YUC5_ARATH Flavin-containing monooxygenase YUCCA5
          OS=Arabidopsis thaliana GN=YUC5 PE=2 SV=1
          Length = 424

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/21 (95%), Positives = 20/21 (95%)
 Frame = +3

Query: 3  RCIWVNGPVIVGAGPSGLAVA 65
          RCIWVNGPVIVGAGPSGLA A
Sbjct: 18 RCIWVNGPVIVGAGPSGLATA 38




>sp|O64489|YUC9_ARATH Flavin-containing monooxygenase YUCCA9
          OS=Arabidopsis thaliana GN=YUC9 PE=2 SV=1
          Length = 421

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 19/21 (90%), Positives = 20/21 (95%)
 Frame = +3

Query: 3  RCIWVNGPVIVGAGPSGLAVA 65
          RC+WVNGPVIVGAGPSGLA A
Sbjct: 18 RCVWVNGPVIVGAGPSGLATA 38