miRNEST 2.0, an integrative microRNA resource :: BLAST
>40095_ath-MIR399d:mirbase
Length = 100
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 ggattactgggcgaatactcctatggcagatcgcattggctagatatgcaagtaaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggattactgggcgaatactcctatggcagatcgcattggctagatatgcaagtaaaatgc 64
Query: 61 ttctctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||||||||||||||
Sbjct: 65 ttctctgccaaaggagatttgccccgcaattc 96
>39887_aly-MIR399d:mirbase
Length = 135
Score = 151 bits (76), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 1 ggattactgggcgaatactcctatggcagatcgcattggctagatatgcaagtaaaatgc 60
||||||||||||||||||||||||||||||| || ||| ||||||||||||| |||||||
Sbjct: 19 ggattactgggcgaatactcctatggcagatagctttgcctagatatgcaagcaaaatgc 78
Query: 61 ttctctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||||||||||||||
Sbjct: 79 ttctctgccaaaggagatttgccccgcaattc 110
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccccgcaattc 117
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccccgcaattc 103
>39892_aly-MIR399i:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccccgcaattc 118
>39890_aly-MIR399g:mirbase
Length = 157
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaatt 91
|||||||||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccccgcaatt 136
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 63 ctctgccaaaggagatttgccccgcaattc 92
|||||||||||||||||||||| |||||||
Sbjct: 79 ctctgccaaaggagatttgcccggcaattc 108
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 63 ctctgccaaaggagatttgccccgcaattc 92
|||||||||||||||||||||| |||||||
Sbjct: 92 ctctgccaaaggagatttgcccggcaattc 121
>42046_osa-MIR399f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 tctctgccaaaggagatttgccccgcaat 90
||||||||||||||||||||||| |||||
Sbjct: 83 tctctgccaaaggagatttgcccagcaat 111
>41246_csi-MIR399a:mirbase
Length = 155
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||| |||||||
Sbjct: 112 tctgccaaaggagatttgcccggcaattc 140
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||| |||||||
Sbjct: 94 tctgccaaaggagatttgcccggcaattc 122
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 63 ctctgccaaaggagatttgccccgcaat 90
|||||||||||||||||||||| |||||
Sbjct: 78 ctctgccaaaggagatttgcccagcaat 105
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||||||||||||| ||||||
Sbjct: 82 ctgccaaaggagatttgcccctcaattc 109
>41452_ptc-MIR399e:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||| ||||||||||||||||||
Sbjct: 84 ctgccaaagaagatttgccccgcaattc 111
>41451_ptc-MIR399d:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||| ||||||||||||||||||
Sbjct: 84 ctgccaaagaagatttgccccgcaattc 111
>40387_rco-MIR399e:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccccgcaatt 91
||||||||||||||||||||| ||||||
Sbjct: 81 tctgccaaaggagatttgcccagcaatt 108
>40299_bna-MIR399:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 ttctctgccaaaggagatttgccc 84
||||||||||||||||||||||||
Sbjct: 76 ttctctgccaaaggagatttgccc 99
>40096_ath-MIR399e:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 63 ctctgccaaaggagatttgccccgcaat 90
||||||||||||||||||||| ||||||
Sbjct: 76 ctctgccaaaggagatttgcctcgcaat 103
>39888_aly-MIR399e:mirbase
Length = 191
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 63 ctctgccaaaggagatttgccccgcaat 90
||||||||||||||||||||| ||||||
Sbjct: 115 ctctgccaaaggagatttgcctcgcaat 142
>39884_aly-MIR399a:mirbase
Length = 162
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 ttctctgccaaaggagatttgccc 84
||||||||||||||||||||||||
Sbjct: 108 ttctctgccaaaggagatttgccc 131
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 tgccaaaggagatttgccccgcaattc 92
||||||||||||||||||| |||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattc 123
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 tgccaaaggagatttgccccgcaattc 92
||||||||||||||||||| |||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattc 123
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 62 tctctgccaaaggagatttgccccgcaattc 92
|||||||||| |||||||||||| |||||||
Sbjct: 97 tctctgccaatggagatttgcccagcaattc 127
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaatt 91
|||||||||||||||||||| ||||||
Sbjct: 78 ctgccaaaggagatttgcccagcaatt 104
>40097_ath-MIR399f:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tctctgccaaaggagatttgccc 84
|||||||||||||||||||||||
Sbjct: 84 tctctgccaaaggagatttgccc 106
>39889_aly-MIR399f:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 62 tctctgccaaaggagatttgccc 84
|||||||||||||||||||||||
Sbjct: 108 tctctgccaaaggagatttgccc 130
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaat 90
|||||||||||||||||||| |||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>42045_osa-MIR399e:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaat 90
|||||||||||||||||||| |||||
Sbjct: 87 ctgccaaaggagatttgcccagcaat 112
>40384_rco-MIR399b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaat 90
|||||||||||||||||||| |||||
Sbjct: 80 ctgccaaaggagatttgcccggcaat 105
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccc 84
|||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgccc 107
>41892_hvu-MIR399:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 tgccaaaggagatttgccccg 86
|||||||||||||||||||||
Sbjct: 102 tgccaaaggagatttgccccg 122
>40740_mtr-MIR399j:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 67 gccaaaggagatttgccccgcaatt 91
||||||| |||||||||||||||||
Sbjct: 67 gccaaagaagatttgccccgcaatt 91
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccc 84
|||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgccc 97
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccc 84
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccc 84
|||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgccc 113
>40092_ath-MIR399a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 tctgccaaaggagatttgccc 84
|||||||||||||||||||||
Sbjct: 91 tctgccaaaggagatttgccc 111
>42824_zma-MIR399f:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||| |||||||||| |||||
Sbjct: 65 ctgccaaaggaaatttgccccggaattc 92
>42595_sbi-MIR399g:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||| |||||||||| |||||
Sbjct: 85 ctgccaaaggaaatttgccccggaattc 112
>42051_osa-MIR399k:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 65 ctgccaaaggagatttgccccgcaattc 92
||||||||||| |||||||||| |||||
Sbjct: 75 ctgccaaaggaaatttgccccggaattc 102
