miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40027_ath-MIR164a:mirbase
          Length = 113

 Score =  224 bits (113), Expect = 1e-59
 Identities = 113/113 (100%)
 Strand = Plus / Minus

                                                                       
Query: 2   gggtgaagagctcatgttggagaagttaagtacgtgcaaataagcaaatgagacggattt 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gggtgaagagctcatgttggagaagttaagtacgtgcaaataagcaaatgagacggattt 54

                                                                
Query: 62  cgtgtttgttggtttgcacgtgccctgcttctccaacatggagattctcaccc 114
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  cgtgtttgttggtttgcacgtgccctgcttctccaacatggagattctcaccc 1




>39816_aly-MIR164a:mirbase
          Length = 79

 Score = 99.6 bits (50), Expect = 4e-22
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                            
Query: 49 atgagacggatttcgtgtttgttggtttgcacgtgccctgcttctccaac 98
          ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atgagacggatttcgtgtttgttggtttgcacgtgccctgcttctccaac 1




>40313_bra-MIR164a:mirbase
          Length = 92

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                       
Query: 61  tcgtgtttgttggtttgcacgtgccctgcttctccaacatggag 104
           |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 45  tcgtgtttgttggtttgcacgtgccctgcttctccaacgtggag 2




>40263_bna-MIR164:mirbase
          Length = 86

 Score = 75.8 bits (38), Expect = 6e-15
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                
Query: 61 tcgtgtttgttggtttgcacgtgccctgcttctccaac 98
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcgtgtttgttggtttgcacgtgccctgcttctccaac 5




>41091_tcc-MIR164a:mirbase
          Length = 128

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 74  tttgcacgtgccctgcttctccaacatggagattctcacccg 115
           |||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 43  tttgcacgtgccctgcttctccaacaaggagctactcacccg 2




>41741_bdi-MIR164e:mirbase
          Length = 127

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 74  tttgcacgtgccctgcttctccaacatggagattctcacc 113
           |||||||||||||||||||||||||| ||  |||||||||
Sbjct: 41  tttgcacgtgccctgcttctccaacaggggcattctcacc 2




>40664_mtr-MIR164a:mirbase
          Length = 99

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 74 tttgcacgtgccctgcttctccaaca 99
          ||||||||||||||||||||||||||
Sbjct: 28 tttgcacgtgccctgcttctccaaca 3




>40438_gma-MIR164:mirbase
          Length = 95

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 75  ttgcacgtgccctgcttctccaacatggag 104
           ||||||||||||||||||||||||| ||||
Sbjct: 32  ttgcacgtgccctgcttctccaacaaggag 3




>41579_vvi-MIR164a:mirbase
          Length = 121

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 76  tgcacgtgccctgcttctccaacatggag 104
           |||||||||||||||||||||||| ||||
Sbjct: 31  tgcacgtgccctgcttctccaacaaggag 3




>41092_tcc-MIR164b:mirbase
          Length = 130

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 75 ttgcacgtgccctgcttctccaaca 99
          |||||||||||||||||||||||||
Sbjct: 42 ttgcacgtgccctgcttctccaaca 18




>41047_ghr-MIR164:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 75 ttgcacgtgccctgcttctccaaca 99
          |||||||||||||||||||||||||
Sbjct: 40 ttgcacgtgccctgcttctccaaca 16




>40666_mtr-MIR164c:mirbase
          Length = 86

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 75 ttgcacgtgccctgcttctccaaca 99
          |||||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctccaaca 3




>40344_rco-MIR164b:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 72 ggtttgcacgtgccctgcttctcca 96
          |||||||||||||||||||||||||
Sbjct: 30 ggtttgcacgtgccctgcttctcca 6




>42507_sbi-MIR164e:mirbase
          Length = 205

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 76 tgcacgtgccctgcttctccaac 98
          |||||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctccaac 1




>41931_osa-MIR164a:mirbase
          Length = 156

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 76 tgcacgtgccctgcttctccaac 98
          |||||||||||||||||||||||
Sbjct: 37 tgcacgtgccctgcttctccaac 15




>41740_bdi-MIR164d:mirbase
          Length = 186

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 76 tgcacgtgccctgcttctccaac 98
          |||||||||||||||||||||||
Sbjct: 38 tgcacgtgccctgcttctccaac 16




>41738_bdi-MIR164b:mirbase
          Length = 209

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 76 tgcacgtgccctgcttctccaac 98
          |||||||||||||||||||||||
Sbjct: 53 tgcacgtgccctgcttctccaac 31




>41319_ptc-MIR164d:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 74 tttgcacgtgccctgcttctcca 96
          |||||||||||||||||||||||
Sbjct: 33 tttgcacgtgccctgcttctcca 11




>41316_ptc-MIR164a:mirbase
          Length = 85

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 74 tttgcacgtgccctgcttctcca 96
          |||||||||||||||||||||||
Sbjct: 33 tttgcacgtgccctgcttctcca 11




>42715_zma-MIR164g:mirbase
          Length = 171

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 76 tgcacgtgccctgcttctccaa 97
          ||||||||||||||||||||||
Sbjct: 22 tgcacgtgccctgcttctccaa 1




>41933_osa-MIR164c:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 74 tttgcacgtgccctgcttctccaaca 99
          ||||||||| ||||||||||||||||
Sbjct: 33 tttgcacgtaccctgcttctccaaca 8




>41318_ptc-MIR164c:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 75 ttgcacgtgccctgcttctcca 96
          ||||||||||||||||||||||
Sbjct: 32 ttgcacgtgccctgcttctcca 11




>40665_mtr-MIR164b:mirbase
          Length = 144

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 75 ttgcacgtgccctgcttctcca 96
          ||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctcca 6




>40343_rco-MIR164a:mirbase
          Length = 78

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 75 ttgcacgtgccctgcttctcca 96
          ||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctcca 6




>42712_zma-MIR164d:mirbase
          Length = 216

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 40 tgcacgtgccctgcttctcca 20




>42711_zma-MIR164c:mirbase
          Length = 270

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 38 tgcacgtgccctgcttctcca 18




>42710_zma-MIR164b:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 41 tgcacgtgccctgcttctcca 21




>42709_zma-MIR164a:mirbase
          Length = 152

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 39 tgcacgtgccctgcttctcca 19




>42637_tae-MIR164:mirbase
          Length = 156

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3




>42506_sbi-MIR164d:mirbase
          Length = 160

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1




>42503_sbi-MIR164:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1




>41936_osa-MIR164f:mirbase
          Length = 210

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 44 tgcacgtgccctgcttctcca 24




>41932_osa-MIR164b:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 29 tgcacgtgccctgcttctcca 9




>41742_bdi-MIR164f:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 76  tgcacgtgccctgcttctcca 96
           |||||||||||||||||||||
Sbjct: 124 tgcacgtgccctgcttctcca 144




>41737_bdi-MIR164a:mirbase
          Length = 193

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 51 tgcacgtgccctgcttctcca 31




>41582_vvi-MIR164d:mirbase
          Length = 118

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11




>41581_vvi-MIR164c:mirbase
          Length = 97

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11




>41320_ptc-MIR164e:mirbase
          Length = 155

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11




>41317_ptc-MIR164b:mirbase
          Length = 162

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11




>41278_ctr-MIR164:mirbase
          Length = 297

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 42 tgcacgtgccctgcttctcca 22




>41221_csi-MIR164:mirbase
          Length = 278

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 34 tgcacgtgccctgcttctcca 14




>40345_rco-MIR164c:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 26 tgcacgtgccctgcttctcca 6




>40028_ath-MIR164b:mirbase
          Length = 153

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3




>39817_aly-MIR164b:mirbase
          Length = 161

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 76 tgcacgtgccctgcttctcca 96
          |||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3




>42714_zma-MIR164f:mirbase
          Length = 108

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 gcacgtgccctgcttctcca 96
          ||||||||||||||||||||
Sbjct: 21 gcacgtgccctgcttctcca 2




>42504_sbi-MIR164b:mirbase
          Length = 111

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 gcacgtgccctgcttctcca 96
          ||||||||||||||||||||
Sbjct: 40 gcacgtgccctgcttctcca 21




>41934_osa-MIR164d:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 gcacgtgccctgcttctcca 96
          ||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11




>41739_bdi-MIR164c:mirbase
          Length = 138

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 gcacgtgccctgcttctcca 96
          ||||||||||||||||||||
Sbjct: 53 gcacgtgccctgcttctcca 34




>40029_ath-MIR164c:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 gcacgtgccctgcttctcca 96
          ||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11




>39818_aly-MIR164c:mirbase
          Length = 115

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 gcacgtgccctgcttctcca 96
          ||||||||||||||||||||
Sbjct: 37 gcacgtgccctgcttctcca 18