miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47539_ath-miRf10439-akr:pmrd
Length = 115
Score = 224 bits (113), Expect = 1e-59
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 1 gggtgaagagctcatgttggagaagttaagtacgtgcaaataagcaaatgagacggattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggtgaagagctcatgttggagaagttaagtacgtgcaaataagcaaatgagacggattt 61
Query: 61 cgtgtttgttggtttgcacgtgccctgcttctccaacatggagattctcaccc 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgtgtttgttggtttgcacgtgccctgcttctccaacatggagattctcaccc 114
>46940_ath-miR164a:pmrd
Length = 113
Score = 224 bits (113), Expect = 1e-59
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 1 gggtgaagagctcatgttggagaagttaagtacgtgcaaataagcaaatgagacggattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gggtgaagagctcatgttggagaagttaagtacgtgcaaataagcaaatgagacggattt 54
Query: 61 cgtgtttgttggtttgcacgtgccctgcttctccaacatggagattctcaccc 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cgtgtttgttggtttgcacgtgccctgcttctccaacatggagattctcaccc 1
>48398_bra-miR164a:pmrd
Length = 92
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 60 tcgtgtttgttggtttgcacgtgccctgcttctccaacatggag 103
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 45 tcgtgtttgttggtttgcacgtgccctgcttctccaacgtggag 2
>48341_bna-miR164:pmrd
Length = 86
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 60 tcgtgtttgttggtttgcacgtgccctgcttctccaac 97
||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcgtgtttgttggtttgcacgtgccctgcttctccaac 5
>48708_mtr-miR164a:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 73 tttgcacgtgccctgcttctccaaca 98
||||||||||||||||||||||||||
Sbjct: 28 tttgcacgtgccctgcttctccaaca 3
>48547_gma-miR164:pmrd
Length = 95
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 74 ttgcacgtgccctgcttctccaacatggag 103
||||||||||||||||||||||||| ||||
Sbjct: 32 ttgcacgtgccctgcttctccaacaaggag 3
>48419_cav-miR164:pmrd
Length = 95
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 74 ttgcacgtgccctgcttctccaacatggag 103
||||||||||||||||||||||||| ||||
Sbjct: 32 ttgcacgtgccctgcttctccaacaaggag 3
>54785_vvi-miR164a:pmrd
Length = 121
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctccaacatggag 103
|||||||||||||||||||||||| ||||
Sbjct: 31 tgcacgtgccctgcttctccaacaaggag 3
>48710_mtr-miR164c:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 74 ttgcacgtgccctgcttctccaaca 98
|||||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctccaaca 3
>54414_sbi-miR164e:pmrd
Length = 205
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctccaac 97
|||||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctccaac 1
>51862_ptc-miRf10040-akr:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tttgcacgtgccctgcttctcca 95
|||||||||||||||||||||||
Sbjct: 55 tttgcacgtgccctgcttctcca 77
>51622_ptc-miR164d:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 tttgcacgtgccctgcttctcca 95
|||||||||||||||||||||||
Sbjct: 33 tttgcacgtgccctgcttctcca 11
>51619_ptc-miR164a:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 73 tttgcacgtgccctgcttctcca 95
|||||||||||||||||||||||
Sbjct: 33 tttgcacgtgccctgcttctcca 11
>50414_osa-miRf11199-akr:pmrd
Length = 146
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctccaac 97
|||||||||||||||||||||||
Sbjct: 33 tgcacgtgccctgcttctccaac 11
>48838_osa-miR164a:pmrd
Length = 156
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctccaac 97
|||||||||||||||||||||||
Sbjct: 37 tgcacgtgccctgcttctccaac 15
>51621_ptc-miR164c:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttgcacgtgccctgcttctcca 95
||||||||||||||||||||||
Sbjct: 32 ttgcacgtgccctgcttctcca 11
>48840_osa-miR164c:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 73 tttgcacgtgccctgcttctccaaca 98
||||||||| ||||||||||||||||
Sbjct: 33 tttgcacgtaccctgcttctccaaca 8
>48709_mtr-miR164b:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttgcacgtgccctgcttctcca 95
||||||||||||||||||||||
Sbjct: 27 ttgcacgtgccctgcttctcca 6
>54956_zma-miR164h:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 24 tgcacgtgccctgcttctcca 4
>54955_zma-miR164g:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>54954_zma-miR164f:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>54953_zma-miR164e:pmrd
Length = 242
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 24 tgcacgtgccctgcttctcca 4
>54952_zma-miR164d:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 40 tgcacgtgccctgcttctcca 20
>54951_zma-miR164c:pmrd
Length = 270
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 38 tgcacgtgccctgcttctcca 18
>54950_zma-miR164b:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 41 tgcacgtgccctgcttctcca 21
>54949_zma-miR164a:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 39 tgcacgtgccctgcttctcca 19
>54788_vvi-miR164d:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>54787_vvi-miR164c:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>54676_tae-miR164b:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>54413_sbi-miR164d:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>54410_sbi-miR164:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>53142_ptc-miRf11320-akr:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 35 tgcacgtgccctgcttctcca 15
>52901_ptc-miRf11079-akr:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 35 tgcacgtgccctgcttctcca 15
>51623_ptc-miR164e:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>51620_ptc-miR164b:pmrd
Length = 162
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>51348_ppl-miR164:pmrd
Length = 159
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 31 tgcacgtgccctgcttctcca 11
>48843_osa-miR164f:pmrd
Length = 210
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 44 tgcacgtgccctgcttctcca 24
>48839_osa-miR164b:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 29 tgcacgtgccctgcttctcca 9
>48473_csi-miR164:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 21 tgcacgtgccctgcttctcca 1
>47347_ath-miRf10247-akr:pmrd
Length = 159
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 26 tgcacgtgccctgcttctcca 6
>46941_ath-miR164b:pmrd
Length = 153
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tgcacgtgccctgcttctcca 95
|||||||||||||||||||||
Sbjct: 23 tgcacgtgccctgcttctcca 3
>54411_sbi-miR164b:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 76 gcacgtgccctgcttctcca 95
||||||||||||||||||||
Sbjct: 40 gcacgtgccctgcttctcca 21
>48841_osa-miR164d:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 76 gcacgtgccctgcttctcca 95
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
>46942_ath-miR164c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 76 gcacgtgccctgcttctcca 95
||||||||||||||||||||
Sbjct: 30 gcacgtgccctgcttctcca 11
