miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47866_ath-miRf10766-akr:pmrd
          Length = 112

 Score =  218 bits (110), Expect = 6e-58
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcgggtttgggtcaggtattttgggttcgagtttttcgggtttagaaatttaagacccgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tcgggtttgggtcaggtattttgggttcgagtttttcgggtttagaaatttaagacccgt 52

                                                             
Query: 61  tctatatataaataaacccaaactcgaacccgaacctgaaccgaatccga 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  tctatatataaataaacccaaactcgaacccgaacctgaaccgaatccga 2




>47552_ath-miRf10452-akr:pmrd
          Length = 116

 Score =  218 bits (110), Expect = 6e-58
 Identities = 110/110 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcgggtttgggtcaggtattttgggttcgagtttttcgggtttagaaatttaagacccgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   tcgggtttgggtcaggtattttgggttcgagtttttcgggtttagaaatttaagacccgt 63

                                                             
Query: 61  tctatatataaataaacccaaactcgaacccgaacctgaaccgaatccga 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  tctatatataaataaacccaaactcgaacccgaacctgaaccgaatccga 113




>47223_ath-miRf10123-akr:pmrd
          Length = 151

 Score =  218 bits (110), Expect = 6e-58
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcgggtttgggtcaggtattttgggttcgagtttttcgggtttagaaatttaagacccgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tcgggtttgggtcaggtattttgggttcgagtttttcgggtttagaaatttaagacccgt 69

                                                             
Query: 61  tctatatataaataaacccaaactcgaacccgaacctgaaccgaatccga 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  tctatatataaataaacccaaactcgaacccgaacctgaaccgaatccga 19