miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47511_ath-miRf10411-akr:pmrd
Length = 144
Score = 143 bits (72), Expect = 5e-35
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 26 gggtgtcaatcgacaccatctggaataatttccttctcctctgtgaaattgtcgattcca 85
||||||| |||||||||||| ||||| |||||| |||||| | |||||||| ||||||
Sbjct: 17 gggtgtcgatcgacaccatcatgaatagtttcctcctcctccgcaaaattgtcaattcca 76
Query: 86 ctcgacaaaggcaaaacagagtcgtcaagagtaattggtgtcgatcgacaccctgatgca 145
||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| || |
Sbjct: 77 ctcgacaaaggaaaaacagaggcgtcaagagtaactggtgtcgatcgacaccctggtgta 136
Query: 146 tcgatcga 153
||||||||
Sbjct: 137 tcgatcga 144
>47198_ath-miRf10098-akr:pmrd
Length = 140
Score = 139 bits (70), Expect = 7e-34
Identities = 112/126 (88%)
Strand = Plus / Minus
Query: 26 gggtgtcaatcgacaccatctggaataatttccttctcctctgtgaaattgtcgattcca 85
||||||| |||||||||||| ||||| |||||| |||||| | |||||||| ||||||
Sbjct: 126 gggtgtcgatcgacaccatcatgaatagtttcctcctcctccgcaaaattgtcaattcca 67
Query: 86 ctcgacaaaggcaaaacagagtcgtcaagagtaattggtgtcgatcgacaccctgatgca 145
||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| || |
Sbjct: 66 ctcgacaaaggaaaaacagaggcgtcaagagtaactggtgtcgatcgacaccctggtgta 7
Query: 146 tcgatc 151
||||||
Sbjct: 6 tcgatc 1
