miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>47523_ath-miRf10423-akr:pmrd
          Length = 122

 Score =  190 bits (96), Expect = 2e-49
 Identities = 114/120 (95%)
 Strand = Plus / Plus

                                                                       
Query: 3   tggtgtcggtcgacactatcaatgtgtgtcgagcgattctggagattaatgtccagcctg 62
           |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||
Sbjct: 1   tggtgtcggtcgacactatcaatgtgtgtcgagcgattttggagatcaatgtcgagcttg 60

                                                                       
Query: 63  gtcgattctacttcgtcacagcctgatgtctcgtatatatgcgatggtgtcgatcgacac 122
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctcgattctgcttcgtcacagcctgatgtctcgtatatatgcgatggtgtcgatcgacac 120




>47147_ath-miRf10047-akr:pmrd
          Length = 91

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 gcgatggtgtcgatcgacac 122
           ||||||||||||||||||||
Sbjct: 91  gcgatggtgtcgatcgacac 72