miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49080_osa-miR819i:pmrd
Length = 198
Score = 69.9 bits (35), Expect = 5e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 ttactacctccgtttcaggttataagactttctag 52
|||||||||||||||||||||||||||||||||||
Sbjct: 26 ttactacctccgtttcaggttataagactttctag 60
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 14 aatattactacctccgtttcaggttataagactttctag 52
||||||||| ||||||||||| |||||||| |||||||
Sbjct: 185 aatattacttcctccgtttcatattataagattttctag 147
>49082_osa-miR819k:pmrd
Length = 156
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||||||||
Sbjct: 2 tactacctccgtttcaggttataagactttctag 35
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 19 tactacctccgtttcaggttataagactttctag 52
|||| ||||||||||| ||||||||||||||||
Sbjct: 155 tacttcctccgtttcatattataagactttctag 122
>49081_osa-miR819j:pmrd
Length = 175
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||||||||
Sbjct: 13 tactacctccgtttcaggttataagactttctag 46
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 13 aaatattactacctccgtttcaggttataagactttctag 52
||||| |||| ||||||||||| |||||| |||||||||
Sbjct: 172 aaataatacttcctccgtttcatattataaaactttctag 133
>49076_osa-miR819e:pmrd
Length = 154
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||||||||
Sbjct: 1 tactacctccgtttcaggttataagactttctag 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 19 tactacctccgtttcaggttataagactttctag 52
|||| ||||||||||| ||||||||||||||||
Sbjct: 154 tacttcctccgtttcatattataagactttctag 121
>49075_osa-miR819d:pmrd
Length = 152
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||||||||
Sbjct: 2 tactacctccgtttcaggttataagactttctag 35
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 19 tactacctccgtttcaggttataagactttctag 52
|||| |||||||||||||||||||||||||||||
Sbjct: 151 tacttcctccgtttcaggttataagactttctag 118
>49074_osa-miR819c:pmrd
Length = 154
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||||||||
Sbjct: 1 tactacctccgtttcaggttataagactttctag 34
>49073_osa-miR819b:pmrd
Length = 166
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||||||||
Sbjct: 7 tactacctccgtttcaggttataagactttctag 40
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 19 tactacctccgtttcaggttataagactttctag 52
|||| ||||||||||| ||||||||||||||||
Sbjct: 160 tacttcctccgtttcatattataagactttctag 127
>49079_osa-miR819h:pmrd
Length = 155
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 19 tactacctccgtttcaggttataagactttct 50
||||||||||||||||||||||||||||||||
Sbjct: 155 tactacctccgtttcaggttataagactttct 124
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 25 ctccgtttcaggttataagactttctag 52
||||||||||||||||||||||||||||
Sbjct: 8 ctccgtttcaggttataagactttctag 35
>51211_osa-miRf11996-akr:pmrd
Length = 110
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 19 tactacctccgtttcaggttataagactttctag 52
|||||||||| |||||||||||||||||||||||
Sbjct: 1 tactacctccatttcaggttataagactttctag 34
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 27 ccgtttcaggttataagactttcta 51
|||||||||||||||||||||||||
Sbjct: 102 ccgtttcaggttataagactttcta 78
>49077_osa-miR819f:pmrd
Length = 144
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 24 cctccgtttcaggttataagactttctag 52
|||||||||||||||||||||||||||||
Sbjct: 1 cctccgtttcaggttataagactttctag 29
>49072_osa-miR819a:pmrd
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 24 cctccgtttcaggttataagactttctag 52
|||||||||||||||||||||||||||||
Sbjct: 1 cctccgtttcaggttataagactttctag 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 24 cctccgtttcaggttataagactttctag 52
||||||||||| ||||||||||||||||
Sbjct: 125 cctccgtttcatattataagactttctag 97
>49078_osa-miR819g:pmrd
Length = 147
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 26 tccgtttcaggttataagactttctag 52
|||||||||||||||||||||||||||
Sbjct: 5 tccgtttcaggttataagactttctag 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 24 cctccgtttcaggttataagactttcta 51
||||||||||| |||||||||||||||
Sbjct: 146 cctccgtttcatattataagactttcta 119
