miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00689;MIR390;AAAA02011305.1/16847-16930 39946:Oryza sativa
          Indica Group
          Length = 84

 Score =  167 bits (84), Expect = 3e-41
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                      
Query: 8  tggaacaatccttgaagctcaggagggatagcgcctcgaaatcaaactaggcgctatcta 67
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tggaacaatccttgaagctcaggagggatagcgcctcgaaatcaaactaggcgctatcta 60

                                  
Query: 68 tcctgagctccatggtttgttctt 91
          ||||||||||||||||||||||||
Sbjct: 61 tcctgagctccatggtttgttctt 84




>RF00689;MIR390;ABEU01005892.1/15773-15902 145481:Physcomitrella
           patens subsp. patens
          Length = 130

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 21  gaagctcaggagggatagcgcc 42
           ||||||||||||||||||||||
Sbjct: 117 gaagctcaggagggatagcgcc 96