miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51041_osa-miRf11826-akr:pmrd
Length = 112
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgagatgccgg 105
||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 62 tagatccaacgatcggaaacgatttggtaccgtgagataccgg 20
>51040_osa-miRf11825-akr:pmrd
Length = 112
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgagatgccgg 105
||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 51 tagatccaacgatcggaaacgatttggtaccgtgagataccgg 93
>51187_osa-miRf11972-akr:pmrd
Length = 122
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 60 tgttagatccaacgatcggaaacgatttagtacc 93
||||||||||||||||||||||||||||||||||
Sbjct: 52 tgttagatccaacgatcggaaacgatttagtacc 19
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 tactaaatcatttctgatcgttggatctaac 46
||||||||| |||| ||||||||||||||||
Sbjct: 21 tactaaatcgtttccgatcgttggatctaac 51
>50297_osa-miRf11082-akr:pmrd
Length = 119
Score = 60.0 bits (30), Expect = 3e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 60 tgttagatccaacgatcggaaacgatttagtaccgtgagatgccgg 105
||||||||||||| |||| ||||||||| |||||||||||| ||||
Sbjct: 52 tgttagatccaacaatcgaaaacgatttggtaccgtgagataccgg 7
>50224_osa-miRf11009-akr:pmrd
Length = 119
Score = 58.0 bits (29), Expect = 1e-09
Identities = 67/79 (84%), Gaps = 3/79 (3%)
Strand = Plus / Minus
Query: 20 aaatcatttctgatcgttggatctaactaggcgggatgga---tgttagatccaacgatc 76
||||||||||||||||||||||||| | | | ||||||| ||||| ||||| |||
Sbjct: 95 aaatcatttctgatcgttggatctagttggtcaggatggacattgttacgtccaatgatt 36
Query: 77 ggaaacgatttagtaccgt 95
|||||||||||||||||||
Sbjct: 35 ggaaacgatttagtaccgt 17
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
|||||||||||||| |||| ||||| ||||||||||
Sbjct: 71 tagatccaacgatcagaaatgatttggtaccgtgag 106
>51020_osa-miRf11805-akr:pmrd
Length = 125
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 60 tgttagatccaacgatcggaaacgattt 87
||||||||||||||||||||||||||||
Sbjct: 55 tgttagatccaacgatcggaaacgattt 28
>50089_osa-miRf10874-akr:pmrd
Length = 123
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||||||||||||| ||||| ||||
Sbjct: 73 tagatccaacgatcggaaacgatttggtaccatgag 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 20 aaatcatttctgatcgttggatctaactaggcgggatggat 60
||||| |||| |||||||||||||| ||||| ||||||||
Sbjct: 97 aaatcgtttccgatcgttggatctagctaggtaggatggat 57
>50088_osa-miRf10873-akr:pmrd
Length = 125
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||||||||||||| ||||| ||||
Sbjct: 74 tagatccaacgatcggaaacgatttggtaccatgag 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 20 aaatcatttctgatcgttggatctaactaggcgggatggat 60
||||| |||| |||||||||||||| ||||| ||||||||
Sbjct: 98 aaatcgtttccgatcgttggatctagctaggtaggatggat 58
>50087_osa-miRf10872-akr:pmrd
Length = 125
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||||||||||||| ||||| ||||
Sbjct: 74 tagatccaacgatcggaaacgatttggtaccatgag 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 20 aaatcatttctgatcgttggatctaactaggcgggatggat 60
||||| |||| |||||||||||||| ||||| ||||||||
Sbjct: 98 aaatcgtttccgatcgttggatctagctaggtaggatggat 58
>50086_osa-miRf10871-akr:pmrd
Length = 142
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||||||||||||| ||||| ||||
Sbjct: 82 tagatccaacgatcggaaacgatttggtaccatgag 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 20 aaatcatttctgatcgttggatctaactaggcgggatggat 60
||||| |||| |||||||||||||| ||||| ||||||||
Sbjct: 106 aaatcgtttccgatcgttggatctagctaggtaggatggat 66
>51206_osa-miRf11991-akr:pmrd
Length = 123
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 62 ttagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||| ||||||| || ||||||||||
Sbjct: 52 ttagatccaacgatcagaaacgacttggtaccgtgag 16
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tttctgatcgttggatctaa 45
||||||||||||||||||||
Sbjct: 33 tttctgatcgttggatctaa 52
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||| ||| ||||||||| |||||||||||||||
Sbjct: 73 tagattcaatgatcggaaataatttagtaccgtgag 108
>51208_osa-miRf11993-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatt 86
||||||||||||||||||||||||
Sbjct: 55 tagatccaacgatcggaaacgatt 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 62 ttagatccaacgatcggaaacgatttagtaccgt 95
|||||||||||||| |||||||||| |||||||
Sbjct: 34 ttagatccaacgattagaaacgatttggtaccgt 1
>51207_osa-miRf11992-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 63 tagatccaacgatcggaaacgatt 86
||||||||||||||||||||||||
Sbjct: 39 tagatccaacgatcggaaacgatt 16
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 62 ttagatccaacgatcggaaacgatttagtaccgtg 96
|||||||||||||| |||||||||| ||||||||
Sbjct: 60 ttagatccaacgattagaaacgatttggtaccgtg 94
>51006_osa-miRf11791-akr:pmrd
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 66 atccaacgatcggaaacgatttagtaccgtga 97
|||||| |||||||||| ||||||||||||||
Sbjct: 33 atccaaagatcggaaactatttagtaccgtga 2
>50917_osa-miRf11702-akr:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 cgatcggaaacgatttagtaccgtgag 98
||||||||||| |||||||||||||||
Sbjct: 47 cgatcggaaacaatttagtaccgtgag 21
>50916_osa-miRf11701-akr:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 cgatcggaaacgatttagtaccgtgag 98
||||||||||| |||||||||||||||
Sbjct: 52 cgatcggaaacaatttagtaccgtgag 26
>50344_osa-miRf11129-akr:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 64 agatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||| ||||||||| ||||||||||
Sbjct: 42 agatccaacgatcaaaaacgatttggtaccgtgag 76
>50343_osa-miRf11128-akr:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 64 agatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||| ||||||||| ||||||||||
Sbjct: 57 agatccaacgatcaaaaacgatttggtaccgtgag 23
>49899_osa-miRf10684-akr:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 60 tgttagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||| |||| ||| ||||| ||||||||||
Sbjct: 52 tgttagatccaacaatcgaaaatgatttggtaccgtgag 14
>49418_osa-miRf10203-akr:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 68 ccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||| |||||||| ||||||
Sbjct: 46 ccaacgatcggaaacaatttagtaacgtgag 76
>49417_osa-miRf10202-akr:pmrd
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 68 ccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||| |||||||| ||||||
Sbjct: 50 ccaacgatcggaaacaatttagtaacgtgag 80
>50250_osa-miRf11035-akr:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgagat 100
||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 62 tagatccaacgatcgtaaatgttttggtaccgtgagat 25
>50904_osa-miRf11689-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 70 aacgatcggaaacgatttagtaccgtgag 98
|||||| ||||| ||||||||||||||||
Sbjct: 58 aacgattggaaatgatttagtaccgtgag 86
>50903_osa-miRf11688-akr:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 70 aacgatcggaaacgatttagtaccgtgag 98
|||||| ||||| ||||||||||||||||
Sbjct: 64 aacgattggaaatgatttagtaccgtgag 92
>50575_osa-miRf11360-akr:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||| ||| |||| ||||||||||
Sbjct: 62 tagatccaacgatcgaaaataatttggtaccgtgag 27
>50574_osa-miRf11359-akr:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 63 tagatccaacgatcggaaacgatttagtaccgtgag 98
||||||||||||||| ||| |||| ||||||||||
Sbjct: 60 tagatccaacgatcgaaaataatttggtaccgtgag 95
>50422_osa-miRf11207-akr:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 19 taaatcatttctgatcgttggatctaac 46
|||||||||||| |||||| ||||||||
Sbjct: 36 taaatcatttcttatcgttagatctaac 63
