miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47336_ath-miRf10236-akr:pmrd
Length = 116
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 tcgatagccgcttcaccgcaactttggtttcattcgtcagtaattgtaatattgtatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tcgatagccgcttcaccgcaactttggtttcattcgtcagtaattgtaatattgtatatt 63
Query: 61 tgtagggaatgttaccaaacgaaacagaagttgcggtgaagcggctatcga 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgtagggaatgttaccaaacgaaacagaagttgcggtgaagcggctatcga 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 aagttgcggtgaagcggctatcga 111
||||||||||||||||||||||||
Sbjct: 27 aagttgcggtgaagcggctatcga 4
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 tcgatagccgcttcaccgcaactt 24
||||||||||||||||||||||||
Sbjct: 114 tcgatagccgcttcaccgcaactt 91
>48235_ath-miRf11135-akr:pmrd
Length = 103
Score = 204 bits (103), Expect = 1e-53
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 5 tagccgcttcaccgcaactttggtttcattcgtcagtaattgtaatattgtatatttgta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tagccgcttcaccgcaactttggtttcattcgtcagtaattgtaatattgtatatttgta 44
Query: 65 gggaatgttaccaaacgaaacagaagttgcggtgaagcggcta 107
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 gggaatgttaccaaacgaaacagaagttgcggtgaagcggcta 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 tagccgcttcaccgcaactt 24
||||||||||||||||||||
Sbjct: 1 tagccgcttcaccgcaactt 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 aagttgcggtgaagcggcta 107
||||||||||||||||||||
Sbjct: 84 aagttgcggtgaagcggcta 103
