miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48203_ath-miRf11103-akr:pmrd
Length = 164
Score = 281 bits (142), Expect = 7e-77
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 1 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 71
Query: 61 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 131
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 132 ggctcgtattcacaagcaactt 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 95 tttctttgtttctttcagtttccagtggctcgtattcaca 134
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 59 tttctttgtttatttcaatttctagtgggtcgtattcaca 20
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 145 tgtgaatacgagccactggaaactgaaagaaacaaagaaa 106
>47946_ath-miRf10846-akr:pmrd
Length = 142
Score = 250 bits (126), Expect = 2e-67
Identities = 138/142 (97%)
Strand = Plus / Plus
Query: 1 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
Query: 61 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 120
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 tagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttcaagt 120
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 121 ggctcgtattcacaagcaactt 142
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 95 tttctttgtttctttcagtttccagtggctcgtattcacaagcaact 141
||||||||||| ||||| |||| ||||| ||||||||||| ||||||
Sbjct: 48 tttctttgtttatttcaatttctagtgggtcgtattcacatgcaact 2
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 134 tgtgaatacgagccacttgaaactgaaagaaacaaagaaa 95
>47070_ath-miR841:pmrd
Length = 212
Score = 250 bits (126), Expect = 2e-67
Identities = 138/142 (97%)
Strand = Plus / Minus
Query: 1 gagttgtatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gagttgcatgtgaatacgacccactagaaattgaaataaacaaagaaatttcattttttg 118
Query: 61 tagtctaatttgatgaaattttatactgatattgtttctttgtttctttcagtttccagt 120
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 117 tagtataatttgataaaattttatactgatattgtttctttgtttctttcagtttcaagt 58
Query: 121 ggctcgtattcacaagcaactt 142
||||||||||||||||||||||
Sbjct: 57 ggctcgtattcacaagcaactt 36
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 95 tttctttgtttctttcagtttccagtggctcgtattcacaagcaact 141
||||||||||| ||||| |||| ||||| ||||||||||| ||||||
Sbjct: 130 tttctttgtttatttcaatttctagtgggtcgtattcacatgcaact 176
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 tgtgaatacgacccactagaaattgaaataaacaaagaaa 48
||||||||||| ||||| |||| ||||| |||||||||||
Sbjct: 44 tgtgaatacgagccacttgaaactgaaagaaacaaagaaa 83
