miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis
           thaliana GN=BXL6 PE=2 SV=1
          Length = 792

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +3

Query: 3   SISAATSFPQVIVSAASFNRTLWYEIGSAVAVEGR 107
           SISAATSFPQVIVSAASFNRTLWYEIGSAVAVEGR
Sbjct: 106 SISAATSFPQVIVSAASFNRTLWYEIGSAVAVEGR 140




>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana
           GN=BXL1 PE=1 SV=1
          Length = 774

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +3

Query: 15  ATSFPQVIVSAASFNRTLWYEIGSAVAVEGR 107
           ATSFPQVI +AASFN++LW EIG  V+ E R
Sbjct: 117 ATSFPQVITTAASFNQSLWEEIGRVVSDEAR 147




>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis
           thaliana GN=BXL2 PE=2 SV=1
          Length = 768

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 20/32 (62%), Positives = 23/32 (71%)
 Frame = +3

Query: 12  AATSFPQVIVSAASFNRTLWYEIGSAVAVEGR 107
           AATSFPQVI + ASFN +LW  IG  V+ E R
Sbjct: 111 AATSFPQVITTVASFNASLWESIGRVVSNEAR 142