miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47960_ath-miRf10860-akr:pmrd
Length = 154
Score = 305 bits (154), Expect = 5e-84
Identities = 154/154 (100%)
Strand = Plus / Minus
Query: 1 gaaagtaacgtccttatgagcaatctccattcctcaggcgtcggtatagatccaagtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gaaagtaacgtccttatgagcaatctccattcctcaggcgtcggtatagatccaagtaac 95
Query: 61 ccggtgactctggtctgattaacctgcatagacaaaatggaacagaatgtattgccaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ccggtgactctggtctgattaacctgcatagacaaaatggaacagaatgtattgccaaag 35
Query: 121 ggaattggagattgctcataaggatgttactatc 154
||||||||||||||||||||||||||||||||||
Sbjct: 34 ggaattggagattgctcataaggatgttactatc 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 agtaacgtccttatgagcaatctcca 29
|||||| |||||||||||||||||||
Sbjct: 4 agtaacatccttatgagcaatctcca 29
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 126 tggagattgctcataaggatgttact 151
||||||||||||||||||| ||||||
Sbjct: 126 tggagattgctcataaggacgttact 151
>47670_ath-miRf10570-akr:pmrd
Length = 154
Score = 305 bits (154), Expect = 5e-84
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 gaaagtaacgtccttatgagcaatctccattcctcaggcgtcggtatagatccaagtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaagtaacgtccttatgagcaatctccattcctcaggcgtcggtatagatccaagtaac 60
Query: 61 ccggtgactctggtctgattaacctgcatagacaaaatggaacagaatgtattgccaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccggtgactctggtctgattaacctgcatagacaaaatggaacagaatgtattgccaaag 120
Query: 121 ggaattggagattgctcataaggatgttactatc 154
||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaattggagattgctcataaggatgttactatc 154
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 126 tggagattgctcataaggatgttact 151
||||||||||||||||||| ||||||
Sbjct: 29 tggagattgctcataaggacgttact 4
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 agtaacgtccttatgagcaatctcca 29
|||||| |||||||||||||||||||
Sbjct: 151 agtaacatccttatgagcaatctcca 126
