miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47693_ath-miRf10593-akr:pmrd
Length = 221
Score = 135 bits (68), Expect = 1e-32
Identities = 146/172 (84%)
Strand = Plus / Plus
Query: 1 tcaaagctttgatggtgtagctaaactccgtatgagtctttgcctttgtatattctaaca 60
||||||||||||||||||||| || ||| |||||||||||| |||||||| || ||| |
Sbjct: 17 tcaaagctttgatggtgtagccgaagtccatatgagtctttgtctttgtatcttttaata 76
Query: 61 aggaaacactacttaggcttttaagctccggttgcggtttaagttcttatactcaatcat 120
|||| ||| |||||||||||||||| || | |||| ||| |||| ||||||||| ||||
Sbjct: 77 aggatacaatacttaggcttttaagatctgtttgcagttctagttgttatactcactcat 136
Query: 121 acacatcacatcaagttagtttttactccaaaacactaaccaagtttcttct 172
|||||| |||| ||| | ||| |||||||||||||||||||| |||||||
Sbjct: 137 acacatggcatctagtcatatttgactccaaaacactaaccaaggttcttct 188
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tcaaagctttgatggtgtagctaaa 25
|||||||||||||||||||||||||
Sbjct: 194 tcaaagctttgatggtgtagctaaa 218
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 166 ttcttcttgcatctcaaagctttga 190
|||||||| ||||||||||||||||
Sbjct: 4 ttcttcttccatctcaaagctttga 28
>47975_ath-miRf10875-akr:pmrd
Length = 123
Score = 58.0 bits (29), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 70 tacttaggcttttaagctccggttgcggtttaagttcttatactcaatcatac 122
|||||||||||||||| || |||||||||| |||| ||||||||| ||||||
Sbjct: 5 tacttaggcttttaagatctggttgcggttctagttgttatactcactcatac 57
Score = 44.1 bits (22), Expect = 4e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 70 tacttaggcttttaagctccggttgcggtttaagttcttatactcaatcataca 123
||||||||||||||| | ||||||||||| | || ||||||||| |||||||
Sbjct: 119 tacttaggcttttaaaattcggttgcggttctatttgttatactcactcataca 66
