miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48292_ath-miRf11192-akr:pmrd
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
>48216_ath-miRf11116-akr:pmrd
Length = 85
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>48184_ath-miRf11084-akr:pmrd
Length = 85
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>48160_ath-miRf11060-akr:pmrd
Length = 85
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>48072_ath-miRf10972-akr:pmrd
Length = 85
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>48071_ath-miRf10971-akr:pmrd
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
>47989_ath-miRf10889-akr:pmrd
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
>47813_ath-miRf10713-akr:pmrd
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 tcctgagtactctcttccaagtttattcgcacagtggactgtgtgatttaagtttgggag 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
>47770_ath-miRf10670-akr:pmrd
Length = 85
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>48279_ath-miRf11179-akr:pmrd
Length = 71
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 1 tcctgagtactctcttccaagtttattcgcacagtggactgtgtgatttaagtttggggg 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
>47942_ath-miRf10842-akr:pmrd
Length = 85
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttattcacacaatggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>47886_ath-miRf10786-akr:pmrd
Length = 71
Score = 125 bits (63), Expect = 4e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgagtactctcttccaagtttggtcacacagtggactgtgtgatttaagtttgggag 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
>48222_ath-miRf11122-akr:pmrd
Length = 85
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
Sbjct: 8 tcctgagtactctcttccaagtttatgcgcacagtggactgtgtgatttaagtttggggg 67
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 68 agggctcagga 78
>48221_ath-miRf11121-akr:pmrd
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 1 tcctgagtactctcttccaagtttattcacacagtggactgtgtgatttaagtttgggag 60
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |
Sbjct: 1 tcctgagtactctcttccaagtttatgcgcacagtggactgtgtgatttaagtttggggg 60
Query: 61 agggctcagga 71
|||||||||||
Sbjct: 61 agggctcagga 71
