miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48008_ath-miRf10908-akr:pmrd
Length = 134
Score = 266 bits (134), Expect = 4e-72
Identities = 134/134 (100%)
Strand = Plus / Minus
Query: 1 agacaaaacaatgtggattccaacaggaagtggaacttggttctctaacagctactcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 agacaaaacaatgtggattccaacaggaagtggaacttggttctctaacagctactcatc 75
Query: 61 atattggaatcaagttccacttcctgttagagaaccaagttccacttcctgttggaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atattggaatcaagttccacttcctgttagagaaccaagttccacttcctgttggaatcc 15
Query: 121 acattgttttgtct 134
||||||||||||||
Sbjct: 14 acattgttttgtct 1
Score = 101 bits (51), Expect = 1e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 1 agacaaaacaatgtggattccaacaggaagtggaacttggttctctaacag 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacaaaacaatgtggattccaacaggaagtggaacttggttctctaacag 51
Score = 101 bits (51), Expect = 1e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 84 ctgttagagaaccaagttccacttcctgttggaatccacattgttttgtct 134
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ctgttagagaaccaagttccacttcctgttggaatccacattgttttgtct 134
>47408_ath-miRf10308-akr:pmrd
Length = 94
Score = 186 bits (94), Expect = 3e-48
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 21 caacaggaagtggaacttggttctctaacagctactcatcatattggaatcaagttccac 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 caacaggaagtggaacttggttctctaacagctactcatcatattggaatcaagttccac 35
Query: 81 ttcctgttagagaaccaagttccacttcctgttg 114
||||||||||||||||||||||||||||||||||
Sbjct: 34 ttcctgttagagaaccaagttccacttcctgttg 1
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 21 caacaggaagtggaacttggttctctaacag 51
|||||||||||||||||||||||||||||||
Sbjct: 1 caacaggaagtggaacttggttctctaacag 31
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 84 ctgttagagaaccaagttccacttcctgttg 114
|||||||||||||||||||||||||||||||
Sbjct: 64 ctgttagagaaccaagttccacttcctgttg 94
