miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 66 tccatgcactgcctcttccctgg 88
|||||||||||||||||||||||
Sbjct: 25 tccatgcactgcctcttccctgg 3
>54892_vvi-miR408:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 ccatgcactgcctcttccctgg 88
||||||||||||||||||||||
Sbjct: 75 ccatgcactgcctcttccctgg 96
>51762_ptc-miR408:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 ccatgcactgcctcttccctgg 88
||||||||||||||||||||||
Sbjct: 74 ccatgcactgcctcttccctgg 95
>48428_cpt-miR408:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 ccatgcactgcctcttccctgg 88
||||||||||||||||||||||
Sbjct: 68 ccatgcactgcctcttccctgg 89
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 67 ccatgcactgcctcttccctgg 88
||||||||||||||||||||||
Sbjct: 28 ccatgcactgcctcttccctgg 7
>47031_ath-miR408:pmrd
Length = 218
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 ccatgcactgcctcttccctgg 88
||||||||||||||||||||||
Sbjct: 118 ccatgcactgcctcttccctgg 139
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 ccatgcactgcctcttccctg 87
|||||||||||||||||||||
Sbjct: 59 ccatgcactgcctcttccctg 79
>51397_ppt-miR408b:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 catgcactgcctcttccctgg 88
|||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctgg 112
>51347_ppe-miR408:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 catgcactgcctcttccctgg 88
|||||||||||||||||||||
Sbjct: 74 catgcactgcctcttccctgg 94
>54585_smo-miR408:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 atgcactgcctcttccctgg 88
||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctgg 95
>51566_pta-miR408:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 atgcactgcctcttccctgg 88
||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctgg 83
