miRNEST 2.0, an integrative microRNA resource :: BLAST
>54388_rco-miR168:pmrd
Length = 156
Score = 79.8 bits (40), Expect = 8e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 22 cggcggtctctaattcgcttggtgcaggtcgggaactgtttcgctttt 69
|||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 5 cggcggtctctaattcgcttggtgcaggtcgggaactgattggctttt 52
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 163 gaattggatcccgccttgcatcaactgaatc 193
|||||||||||||||||||||||||||||||
Sbjct: 110 gaattggatcccgccttgcatcaactgaatc 140
>51651_ptc-miR168b:pmrd
Length = 136
Score = 69.9 bits (35), Expect = 8e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 26 ggtctctaattcgcttggtgcaggtcgggaactgtttcg 64
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcg 39
Score = 63.9 bits (32), Expect = 5e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 163 gaattggatcccgccttgcatcaactgaatccgaga 198
||||||||||||||||||||||||||||||| ||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggaga 136
>51650_ptc-miR168a:pmrd
Length = 160
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 160 agcgaattggatcccgccttgcatcaactgaatc 193
||||||||||||||||||||||||||||||||||
Sbjct: 122 agcgaattggatcccgccttgcatcaactgaatc 155
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 26 ggtctctaattcgcttggtgcaggtcgggaactgtttcg 64
||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcg 39
>48560_gma-miR168:pmrd
Length = 125
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 24 gcggtctctaattcgcttggtgcaggtcgggaac 57
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 162 cgaattggatcccgccttgcatcaactgaatc 193
||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatc 109
>54802_vvi-miR168:pmrd
Length = 132
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 26 ggtctctaattcgcttggtgcaggtcgggaac 57
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 169 gatcccgccttgcatcaactgaatccgagac 199
||||||||||||||||||||||||| |||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>54375_pts-miR168b:pmrd
Length = 140
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 160 agcgaattggatcccgccttgcatcaactga 190
|||||||||||||||||||||||||||||||
Sbjct: 110 agcgaattggatcccgccttgcatcaactga 140
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcgggaactgtttcg 64
|||||||||||||||||||||||| ||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgattcg 29
>46958_ath-miR168b:pmrd
Length = 124
Score = 60.0 bits (30), Expect = 8e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 22 cggcggtctctaattcgcttggtgcaggtcgggaactg 59
|||||||||| ||||||||||||||||||||||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactg 42
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 165 attggatcccgccttgcatcaactgaatc 193
|||||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactgaatc 119
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 attcgcttggtgcaggtcgggaac 57
||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaac 34
>46957_ath-miR168a:pmrd
Length = 138
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 165 attggatcccgccttgcatcaactgaatc 193
|||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatc 124
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 attcgcttggtgcaggtcgggaac 57
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>54374_pts-miR168a:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 163 gaattggatcccgccttgcatcaactga 190
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcgggaactg 59
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>54366_ptr-miR168:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 163 gaattggatcccgccttgcatcaactga 190
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcgggaactg 59
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>48349_bna-miR168:pmrd
Length = 133
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 22 cggcggtctctaattcgcttggtgcaggtcgggaactg 59
|||||| |||| | ||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactg 41
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 168 ggatcccgccttgcatcaactgaatccgag 197
||||||||||||| ||||| ||||||||||
Sbjct: 94 ggatcccgccttgtatcaagtgaatccgag 123
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 165 attggatcccgccttgcatcaactga 190
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcgggaac 57
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcgggaactg 59
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>55000_zma-miR168b:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 168 ggatcccgccttgcatcaactgaatc 193
||||||||||||||||||| ||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatc 88
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 166 ttggatcccgccttgcatcaactga 190
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcggga 55
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54436_sbi-miR168:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 169 gatcccgccttgcatcaactgaatccgag 197
|||||||||||||| ||| ||||||||||
Sbjct: 66 gatcccgccttgcaccaagtgaatccgag 94
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 36 tcgcttggtgcaggtcggga 55
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>48874_osa-miR168b:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 38 gcttggtgcaggtcgggaactgtt 61
||||||||||| ||||||||||||
Sbjct: 13 gcttggtgcagctcgggaactgtt 36
