miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48437_cre-miR913:pmrd
Length = 249
Score = 494 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 gtatctgtgtcgctcatgcaagggacagccaacgaattccctcgccacgttttgggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatctgtgtcgctcatgcaagggacagccaacgaattccctcgccacgttttgggggct 60
Query: 61 tgcacacttgcgagtccgtggccgtgtttccaaggatgtatacaagcgaagtcgagactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcacacttgcgagtccgtggccgtgtttccaaggatgtatacaagcgaagtcgagactt 120
Query: 121 tggtattacatactcccacttcgcttttatacattcttggagacacggccacggactcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtattacatactcccacttcgcttttatacattcttggagacacggccacggactcgc 180
Query: 181 aggtgtgcaagcccccgaaacgtcgccagggaattctttggctgtcccttgcatgagcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtgtgcaagcccccgaaacgtcgccagggaattctttggctgtcccttgcatgagcga 240
Query: 241 cacagatac 249
|||||||||
Sbjct: 241 cacagatac 249
Score = 258 bits (130), Expect = 2e-69
Identities = 222/250 (88%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 1 gtatctgtgtcgctcatgcaagggacagccaacgaattccctcgccacgttttgggggct 60
|||||||||||||||||||||||||||||||| ||||||||| || |||||| |||||||
Sbjct: 249 gtatctgtgtcgctcatgcaagggacagccaaagaattccctggcgacgtttcgggggct 190
Query: 61 tgcacacttgcgagtccgtggccgtgtttccaaggatgtatacaagcgaagtcgagactt 120
||||||| ||||||||||||||||||| |||||| ||||||| ||||||||| | || |
Sbjct: 189 tgcacacctgcgagtccgtggccgtgtctccaagaatgtataaaagcgaagtgg-gagta 131
Query: 121 tggtattacatactccc-acttcgcttttatacattcttggagacacggccacggactcg 179
|| || || | || | ||||||||| ||||||| |||||| |||||||||||||||||
Sbjct: 130 tgtaataccaaagtctcgacttcgcttgtatacatccttggaaacacggccacggactcg 71
Query: 180 caggtgtgcaagcccccgaaacgtcgccagggaattctttggctgtcccttgcatgagcg 239
|| |||||||||||||| |||||| || ||||||||| ||||||||||||||||||||||
Sbjct: 70 caagtgtgcaagcccccaaaacgtggcgagggaattcgttggctgtcccttgcatgagcg 11
Query: 240 acacagatac 249
||||||||||
Sbjct: 10 acacagatac 1