miRNEST 2.0, an integrative microRNA resource :: BLAST
>51596_ptc-miR156f:pmrd
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 77/90 (85%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacgc--aggcagattgtatgaaaggccatacctttgcccg 66
|||||||||||||||||||||| | | || |||||||||||| |||||| |||| |
Sbjct: 11 tgacagaagagagtgagcacacacgaaagctaattgtatgaaag--cataccattgcagg 68
Query: 67 ccgtgtgctcacttctcttctgtcagctta 96
||||||||||||||||||||||||||||
Sbjct: 69 gtgtgtgctcacttctcttctgtcagctta 98
>54912_zma-miR156b:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 aggtttgacagaagagagtgagcacac 30
|||||||||||||||||||||||||||
Sbjct: 16 aggtttgacagaagagagtgagcacac 42
>48425_cpt-miR156a:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacgcagg 35
|||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacgcagg 37
>54656_stu-miR156a:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacgcag 34
||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacgcag 26
>54769_vvi-miR156d:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacgcaggca 37
||||||||||||||||||||| |||||||
Sbjct: 11 tgacagaagagagtgagcacatgcaggca 39
>48243_ath-miRf11143-akr:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 9 tgacagaagagagtgagcacacgcaggca 37
||||||||||||||||||||| |||||||
Sbjct: 90 tgacagaagagagtgagcacatgcaggca 62
>46911_ath-miR156b:pmrd
Length = 183
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacgcaggca 37
||||||||||||||||||||| |||||||
Sbjct: 47 tgacagaagagagtgagcacatgcaggca 75
>54914_zma-miR156d:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacacg 31
||||||||||||||||||||||||
Sbjct: 15 ttgacagaagagagtgagcacacg 38
>54402_sbi-miR157:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacacg 31
||||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagtgagcacacg 24
>48810_osa-miR156j:pmrd
Length = 165
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacacg 31
||||||||||||||||||||||||
Sbjct: 41 ttgacagaagagagtgagcacacg 64
>48808_osa-miR156h:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacacg 31
||||||||||||||||||||||||
Sbjct: 8 ttgacagaagagagtgagcacacg 31
>48804_osa-miR156d:pmrd
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacacg 31
||||||||||||||||||||||||
Sbjct: 19 ttgacagaagagagtgagcacacg 42
>48802_osa-miR156b:pmrd
Length = 176
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 gaggtttgacagaagagagtgagcacac 30
||||| ||||||||||||||||||||||
Sbjct: 37 gaggtctgacagaagagagtgagcacac 64
>54923_zma-miR156n:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>54919_zma-miR156i:pmrd
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacacg 35
>54918_zma-miR156h:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>54915_zma-miR156e:pmrd
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>54400_sbi-miR156h:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>54399_sbi-miR156g:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>54393_sbi-miR156a:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>52469_ptc-miRf10647-akr:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 ttgacagaagagagtgagcacac 30
|||||||||||||||||||||||
Sbjct: 94 ttgacagaagagagtgagcacac 72
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gtgtgctcacttctcttctgtcagctt 95
|||||||||| ||||||||||||||||
Sbjct: 68 gtgtgctcacatctcttctgtcagctt 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 8 tgacagaagagagtgagcacac 29
>51595_ptc-miR156e:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacac 30
|||||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcacac 32
>51594_ptc-miR156d:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacac 30
|||||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcacac 32
>51591_ptc-miR156a:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gtgtgctcacttctcttctgtcagctt 95
|||||||||| ||||||||||||||||
Sbjct: 71 gtgtgctcacatctcttctgtcagctt 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>49326_osa-miRf10111-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>48813_osa-miR156m:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>48809_osa-miR156i:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacacg 25
>48806_osa-miR156f:pmrd
Length = 186
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacac 30
|||||||||||||||||||||||
Sbjct: 3 ttgacagaagagagtgagcacac 25
>48805_osa-miR156e:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacacg 32
>48801_osa-miR156a:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacacg 31
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>47667_ath-miRf10567-akr:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacac 30
|||||||||||||||||||||||
Sbjct: 5 ttgacagaagagagtgagcacac 27
>46913_ath-miR156d:pmrd
Length = 118
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcacac 30
|||||||||||||||||||||||
Sbjct: 17 ttgacagaagagagtgagcacac 39
>54924_zma-miR156o:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54922_zma-miR156m:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54913_zma-miR156c:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>54911_zma-miR156a:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacac 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 61 tgcccgccgtgtgctcacttctcttctgtcag 92
||||||| |||||||||| |||||||||||||
Sbjct: 47 tgcccgctgtgtgctcac-tctcttctgtcag 17
>54768_vvi-miR156c:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>54767_vvi-miR156b:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>54758_tre-miR156:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 ttgacagaagagagtgagcaca 29
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagtgagcaca 22
>54569_smo-miR156a:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 gacagaagagagtgagcacacg 31
||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacg 33
>54401_sbi-miR156i:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 61 tgcccgccgtgtgctcacttctcttctgtcag 92
||||||| |||||||||| |||||||||||||
Sbjct: 32 tgcccgctgtgtgctcac-tctcttctgtcag 2
>54395_sbi-miR156c:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54394_sbi-miR156b:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>53789_ptc-miRf11967-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>51593_ptc-miR156c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51592_ptc-miR156b:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51354_ppr-miR156:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 89 tgacagaagagagtgagcacac 68
>48807_osa-miR156g:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcacac 25
Score = 42.1 bits (21), Expect = 7e-05
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 61 tgcccgccgtgtgctcacttctcttctgtcagc 93
||||||| |||||||||| ||||||||||||||
Sbjct: 33 tgcccgctgtgtgctcac-tctcttctgtcagc 2
>48803_osa-miR156c:pmrd
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcacac 50
>48795_oru-miR156:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>48652_hvv-miR156a:pmrd
Length = 394
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>48489_ghr-miR156b:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>48488_ghr-miR156a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacac 30
>48336_bna-miR156a:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcacac 75
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>46915_ath-miR156f:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>46914_ath-miR156e:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacac 28
>46912_ath-miR156c:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcacac 33
>46910_ath-miR156a:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tgacagaagagagtgagcacac 30
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
