miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51596_ptc-miR156f:pmrd
          Length = 101

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 77/90 (85%), Gaps = 4/90 (4%)
 Strand = Plus / Plus

                                                                      
Query: 9  tgacagaagagagtgagcacacgc--aggcagattgtatgaaaggccatacctttgcccg 66
          |||||||||||||||||||||| |  | ||  ||||||||||||  |||||| ||||  |
Sbjct: 11 tgacagaagagagtgagcacacacgaaagctaattgtatgaaag--cataccattgcagg 68

                                        
Query: 67 ccgtgtgctcacttctcttctgtcagctta 96
            ||||||||||||||||||||||||||||
Sbjct: 69 gtgtgtgctcacttctcttctgtcagctta 98




>54912_zma-miR156b:pmrd
          Length = 124

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 4  aggtttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||||||
Sbjct: 16 aggtttgacagaagagagtgagcacac 42




>48425_cpt-miR156a:pmrd
          Length = 101

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 9  tgacagaagagagtgagcacacgcagg 35
          |||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacgcagg 37




>54656_stu-miR156a:pmrd
          Length = 86

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 9  tgacagaagagagtgagcacacgcag 34
          ||||||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacacgcag 26




>54769_vvi-miR156d:pmrd
          Length = 103

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 9  tgacagaagagagtgagcacacgcaggca 37
          ||||||||||||||||||||| |||||||
Sbjct: 11 tgacagaagagagtgagcacatgcaggca 39




>48243_ath-miRf11143-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 9  tgacagaagagagtgagcacacgcaggca 37
          ||||||||||||||||||||| |||||||
Sbjct: 90 tgacagaagagagtgagcacatgcaggca 62




>46911_ath-miR156b:pmrd
          Length = 183

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 9  tgacagaagagagtgagcacacgcaggca 37
          ||||||||||||||||||||| |||||||
Sbjct: 47 tgacagaagagagtgagcacatgcaggca 75




>54914_zma-miR156d:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 8  ttgacagaagagagtgagcacacg 31
          ||||||||||||||||||||||||
Sbjct: 15 ttgacagaagagagtgagcacacg 38




>54402_sbi-miR157:pmrd
          Length = 86

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 8  ttgacagaagagagtgagcacacg 31
          ||||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagtgagcacacg 24




>48810_osa-miR156j:pmrd
          Length = 165

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 8  ttgacagaagagagtgagcacacg 31
          ||||||||||||||||||||||||
Sbjct: 41 ttgacagaagagagtgagcacacg 64




>48808_osa-miR156h:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 8  ttgacagaagagagtgagcacacg 31
          ||||||||||||||||||||||||
Sbjct: 8  ttgacagaagagagtgagcacacg 31




>48804_osa-miR156d:pmrd
          Length = 129

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 8  ttgacagaagagagtgagcacacg 31
          ||||||||||||||||||||||||
Sbjct: 19 ttgacagaagagagtgagcacacg 42




>48802_osa-miR156b:pmrd
          Length = 176

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 3  gaggtttgacagaagagagtgagcacac 30
          ||||| ||||||||||||||||||||||
Sbjct: 37 gaggtctgacagaagagagtgagcacac 64




>54923_zma-miR156n:pmrd
          Length = 84

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacacg 23




>54919_zma-miR156i:pmrd
          Length = 117

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacacg 35




>54918_zma-miR156h:pmrd
          Length = 115

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42




>54915_zma-miR156e:pmrd
          Length = 126

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42




>54400_sbi-miR156h:pmrd
          Length = 94

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacacg 24




>54399_sbi-miR156g:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacacg 24




>54393_sbi-miR156a:pmrd
          Length = 84

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacacg 23




>52469_ptc-miRf10647-akr:pmrd
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 8  ttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||
Sbjct: 94 ttgacagaagagagtgagcacac 72




>51926_ptc-miRf10104-akr:pmrd
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 69 gtgtgctcacttctcttctgtcagctt 95
          |||||||||| ||||||||||||||||
Sbjct: 68 gtgtgctcacatctcttctgtcagctt 94



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 8  tgacagaagagagtgagcacac 29




>51595_ptc-miR156e:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  ttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcacac 32




>51594_ptc-miR156d:pmrd
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  ttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcacac 32




>51591_ptc-miR156a:pmrd
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 69 gtgtgctcacttctcttctgtcagctt 95
          |||||||||| ||||||||||||||||
Sbjct: 71 gtgtgctcacatctcttctgtcagctt 97



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32




>49326_osa-miRf10111-akr:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcacacg 29




>48813_osa-miR156m:pmrd
          Length = 86

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacacg 23




>48809_osa-miR156i:pmrd
          Length = 90

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacacg 25




>48806_osa-miR156f:pmrd
          Length = 186

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  ttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||
Sbjct: 3  ttgacagaagagagtgagcacac 25




>48805_osa-miR156e:pmrd
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacacg 32




>48801_osa-miR156a:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 9  tgacagaagagagtgagcacacg 31
          |||||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcacacg 29




>47667_ath-miRf10567-akr:pmrd
          Length = 98

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  ttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||
Sbjct: 5  ttgacagaagagagtgagcacac 27




>46913_ath-miR156d:pmrd
          Length = 118

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 8  ttgacagaagagagtgagcacac 30
          |||||||||||||||||||||||
Sbjct: 17 ttgacagaagagagtgagcacac 39




>54924_zma-miR156o:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>54922_zma-miR156m:pmrd
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>54913_zma-miR156c:pmrd
          Length = 139

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42




>54911_zma-miR156a:pmrd
          Length = 152

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacac 39



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                          
Query: 61 tgcccgccgtgtgctcacttctcttctgtcag 92
          ||||||| |||||||||| |||||||||||||
Sbjct: 47 tgcccgctgtgtgctcac-tctcttctgtcag 17




>54768_vvi-miR156c:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32




>54767_vvi-miR156b:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32




>54758_tre-miR156:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 8  ttgacagaagagagtgagcaca 29
          ||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagtgagcaca 22




>54569_smo-miR156a:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 10 gacagaagagagtgagcacacg 31
          ||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacg 33




>54401_sbi-miR156i:pmrd
          Length = 121

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacac 24



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                          
Query: 61 tgcccgccgtgtgctcacttctcttctgtcag 92
          ||||||| |||||||||| |||||||||||||
Sbjct: 32 tgcccgctgtgtgctcac-tctcttctgtcag 2




>54395_sbi-miR156c:pmrd
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>54394_sbi-miR156b:pmrd
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>53789_ptc-miRf11967-akr:pmrd
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacac 24




>51593_ptc-miR156c:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32




>51592_ptc-miR156b:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32




>51354_ppr-miR156:pmrd
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacac 23




>49442_osa-miRf10227-akr:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 89 tgacagaagagagtgagcacac 68




>48807_osa-miR156g:pmrd
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcacac 25



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                           
Query: 61 tgcccgccgtgtgctcacttctcttctgtcagc 93
          ||||||| |||||||||| ||||||||||||||
Sbjct: 33 tgcccgctgtgtgctcac-tctcttctgtcagc 2




>48803_osa-miR156c:pmrd
          Length = 149

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcacac 50




>48795_oru-miR156:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcacac 23




>48652_hvv-miR156a:pmrd
          Length = 394

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>48489_ghr-miR156b:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacac 24




>48488_ghr-miR156a:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 9  tgacagaagagagtgagcacac 30




>48336_bna-miR156a:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcacac 22




>48248_ath-miRf11148-akr:pmrd
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcacac 75




>47357_ath-miRf10257-akr:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacac 24




>47356_ath-miRf10256-akr:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcacac 24




>46915_ath-miR156f:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42




>46914_ath-miR156e:pmrd
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcacac 28




>46912_ath-miR156c:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcacac 33




>46910_ath-miR156a:pmrd
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 9  tgacagaagagagtgagcacac 30
          ||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42