miRNEST 2.0, an integrative microRNA resource :: BLAST
>45545_miR162:micropc
Length = 91
Score = 180 bits (91), Expect = 2e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
Query: 84 catgaatcgatcgataaacctctgcatccag 114
|||||||||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatccag 91
>46511_miR162:micropc
Length = 89
Score = 176 bits (89), Expect = 3e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
Query: 85 atgaatcgatcgataaacctctgcatcca 113
|||||||||||||||||||||||||||||
Sbjct: 61 atgaatcgatcgataaacctctgcatcca 89
>46039_miR162:micropc
Length = 92
Score = 127 bits (64), Expect = 2e-30
Identities = 86/92 (93%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctg-agaattttgttgtgagaataacacaaat 82
||||||||||||||||||||||||||||||| || |||||||||||| | || ||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaaac 60
Query: 83 acatgaatcgatcgataaacctctgcatccag 114
||||||||||||||||||||||||||||||||
Sbjct: 61 acatgaatcgatcgataaacctctgcatccag 92
>46504_miR162:micropc
Length = 90
Score = 123 bits (62), Expect = 4e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctg-agaattttgttgtgagaataacacaaata 83
|||||||||||||||||||||||||||||| || |||||||||||| | || |||||| |
Sbjct: 1 tggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaaaca 60
Query: 84 catgaatcgatcgataaacctctgcatcca 113
||||||||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
>46817_miR162:micropc
Length = 93
Score = 105 bits (53), Expect = 9e-24
Identities = 85/93 (91%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa- 81
||||||||||||||||||||||| ||| || ||||||||||||| || |||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaa 60
Query: 82 tacatgaatcgatcgataaacctctgcatccag 114
|||||||||||||||||||||||||||||||||
Sbjct: 61 tacatgaatcgatcgataaacctctgcatccag 93
>46597_miR162:micropc
Length = 91
Score = 101 bits (51), Expect = 1e-22
Identities = 83/91 (91%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa-t 82
|||||||||||||||||||||| ||| || ||||||||||||| || ||||||||| |
Sbjct: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
Query: 83 acatgaatcgatcgataaacctctgcatcca 113
|||||||||||||||||||||||||||||||
Sbjct: 61 acatgaatcgatcgataaacctctgcatcca 91
>46096_miR162:micropc
Length = 87
Score = 79.8 bits (40), Expect = 5e-16
Identities = 81/91 (89%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 83
|||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag- 56
Query: 84 catgaatcgatcgataaacctctgcatccag 114
|| |||||| |||||||||||||||||||||
Sbjct: 57 caagaatcggtcgataaacctctgcatccag 87
>45617_miR162:micropc
Length = 88
Score = 77.8 bits (39), Expect = 2e-15
Identities = 81/91 (89%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 83
|||||||||||||||||||||||| || ||||| |||||||||||| | |||||| |
Sbjct: 1 ctggaggcagcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacacagtt- 57
Query: 84 catgaatcgatcgataaacctctgcatccag 114
||||||||| |||||||||||||||||||||
Sbjct: 58 catgaatcggtcgataaacctctgcatccag 88
>44920_miR162:micropc
Length = 85
Score = 75.8 bits (38), Expect = 8e-15
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 84
||||||||||||||||||||||||||||||| |||| | |||| ||| |||||||| |
Sbjct: 1 tggaggcagcggttcatcgatctcttcctga--atttggctgtg-gaagaacacaaag-c 56
Query: 85 atgaatcgatcgataaacctctgcatcca 113
| |||||| ||||||||||||||||||||
Sbjct: 57 aagaatcggtcgataaacctctgcatcca 85
>46549_miR162:micropc
Length = 92
Score = 73.8 bits (37), Expect = 3e-14
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctg-agaatttt-gttgtgagaataacacaaa 81
||||||||||||||||||||||||||||||| ||| |||| ||| ||| | | | |||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaa 59
Query: 82 tacatgaatcgatcgataaacctctgcatccag 114
||||||||||||||||||||||||||||||||
Sbjct: 60 cacatgaatcgatcgataaacctctgcatccag 92
>45757_miR162:micropc
Length = 86
Score = 73.8 bits (37), Expect = 3e-14
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 84
||||||||||||||||||||||| || ||||| |||||||||||| | |||||| | |
Sbjct: 1 tggaggcagcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacacagtt-c 57
Query: 85 atgaatcgatcgataaacctctgcatcca 113
|||||||| ||||||||||||||||||||
Sbjct: 58 atgaatcggtcgataaacctctgcatcca 86
>45903_miR162:micropc
Length = 90
Score = 69.9 bits (35), Expect = 5e-13
Identities = 80/91 (87%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctg-agaatttt-gttgtgagaataacacaaat 82
|||||||||||||||||||||||||||||| ||| |||| ||| ||| | | | |||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaac 59
Query: 83 acatgaatcgatcgataaacctctgcatcca 113
|||||||||||||||||||||||||||||||
Sbjct: 60 acatgaatcgatcgataaacctctgcatcca 90
>45921_miR162:micropc
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgt 67
||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgtggatttttttgt 44
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatccag 114
|||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatccag 110
>46676_miR162:micropc
Length = 97
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 84 catgaatcgatcgataaacctctgcatccag 114
|||||||||||||||||||||||||||||||
Sbjct: 67 catgaatcgatcgataaacctctgcatccag 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatc 46
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>45508_miR162:micropc
Length = 108
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgt 67
|||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgtggatttttttgt 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatcca 113
||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatcca 108
>44934_miR162:micropc
Length = 97
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 84 catgaatcgatcgataaacctctgcatccag 114
|||||||||||||||||||||||||||||||
Sbjct: 67 catgaatcgatcgataaacctctgcatccag 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatc 46
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>46394_miR162:micropc
Length = 95
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 catgaatcgatcgataaacctctgcatcca 113
||||||||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatc 46
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46364_miR162:micropc
Length = 95
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 catgaatcgatcgataaacctctgcatcca 113
||||||||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatc 46
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46456_miR162:micropc
Length = 89
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 26 ggaggcagcggttcatcgatctcttcctg 54
|||||||||||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctg 32
>45283_miR162:micropc
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 26 ggaggcagcggttcatcgatctcttcctg 54
|||||||||||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctg 31
>46026_miR162:micropc
Length = 87
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 83 acatgaatcgatcgataaacctctgcatccag 114
|||||||||| |||||||||||||||||||||
Sbjct: 56 acatgaatcggtcgataaacctctgcatccag 87
>45991_miR162:micropc
Length = 108
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
||||||||||||||||||||||||||||
Sbjct: 81 gaatcgatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
||||||||||||||||||||||||||||
Sbjct: 84 gaatcgatcgataaacctctgcatccag 111
>45749_miR162:micropc
Length = 99
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>44984_miR162:micropc
Length = 85
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcctga 55
||||| ||||||||||||||||||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctcttcctga 32
>46792_miR162:micropc
Length = 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctga 55
|||| ||||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctga 31
>46557_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 83 acatgaatcgatcgataaacctctgcatcca 113
|||||||||| ||||||||||||||||||||
Sbjct: 55 acatgaatcggtcgataaacctctgcatcca 85
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcctga 55
|||| |||||||||||||||||| |||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctga 31
>46457_miR162:micropc
Length = 109
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||||||||||||||||||||||||
Sbjct: 83 gaatcgatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||||||||||||||||||||||||
Sbjct: 71 gaatcgatcgataaacctctgcatcca 97
>44845_miR162:micropc
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||||||||||||||||||||||||
Sbjct: 80 gaatcgatcgataaacctctgcatcca 106
>46628_miR162:micropc
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
|||||| |||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcc 52
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46169_miR162:micropc
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
|||||| |||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcc 52
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>45279_miR162:micropc
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>45084_miR162:micropc
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
|||||| |||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcc 52
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>44890_miR162:micropc
Length = 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
|||||| |||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcc 52
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>44807_miR162:micropc
Length = 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatccag 114
|||||| |||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 24 ctggaggcagcggttcatcgatctcttcc 52
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
>46470_miR162:micropc
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||| ||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcc 52
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45868_miR162:micropc
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||| ||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcc 52
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45605_miR162:micropc
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||| ||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcc 52
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45416_miR162:micropc
Length = 139
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||| ||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcc 52
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
>45338_miR162:micropc
Length = 112
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||||||||||| ||||||||||||
Sbjct: 86 gaatcgatcgataagcctctgcatcca 112
>45197_miR162:micropc
Length = 139
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gaatcgatcgataaacctctgcatcca 113
|||||| ||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 25 tggaggcagcggttcatcgatctcttcc 52
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
