miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41048_ghr-MIR166b:mirbase
Length = 154
Score = 305 bits (154), Expect = 5e-84
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 tgaggggaatgttgtctggaccggggacacttgtgtttctaatccgttttccctgcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggggaatgttgtctggaccggggacacttgtgtttctaatccgttttccctgcaata 60
Query: 61 ttgttctgattaacgtggggatctttatattgcttatttttgtaatggattaaggttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttctgattaacgtggggatctttatattgcttatttttgtaatggattaaggttgta 120
Query: 121 ctagtgtcgtcggaccaggcttcattccccccaa 154
||||||||||||||||||||||||||||||||||
Sbjct: 121 ctagtgtcgtcggaccaggcttcattccccccaa 154
>40033_ath-MIR166b:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 8e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||||||
Sbjct: 88 tagtgtcgtcggaccaggcttcattccccccaa 120
>40351_rco-MIR166e:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 123 agtgtcgtcggaccaggcttcattccccccaa 154
||||||||||||||||||||||||||||||||
Sbjct: 99 agtgtcgtcggaccaggcttcattccccccaa 130
>41587_vvi-MIR166e:mirbase
Length = 166
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 124 gtgtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||||
Sbjct: 129 gtgtcgtcggaccaggcttcattccccccaa 159
>41585_vvi-MIR166c:mirbase
Length = 160
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 124 gtgtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||||
Sbjct: 123 gtgtcgtcggaccaggcttcattccccccaa 153
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 tgaggggaatgttgtctggaccggggacactt 32
||||||||||||||||||| || ||||||||
Sbjct: 7 tgaggggaatgttgtctggctcgaggacactt 38
>41532_sly-MIR166b:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
|||||| ||||||||||||||||||||||||||
Sbjct: 146 tagtgttgtcggaccaggcttcattccccccaa 178
>41324_ptc-MIR166c:mirbase
Length = 134
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||
Sbjct: 101 gtcgtcggaccaggcttcattccccccaa 129
>41279_ctr-MIR166:mirbase
Length = 414
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
||||| |||||||||||||||||||||||||||
Sbjct: 183 tagtgacgtcggaccaggcttcattccccccaa 215
>41226_csi-MIR166e:mirbase
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||
Sbjct: 135 gtcgtcggaccaggcttcattccccccaa 163
>41222_csi-MIR166a:mirbase
Length = 202
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
||||| |||||||||||||||||||||||||||
Sbjct: 153 tagtgacgtcggaccaggcttcattccccccaa 185
>40439_gma-MIR166a:mirbase
Length = 146
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
|||||| ||||||||||||||||||||||||||
Sbjct: 99 tagtgttgtcggaccaggcttcattccccccaa 131
>40348_rco-MIR166b:mirbase
Length = 119
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
||||| |||||||||||||||||||||||||||
Sbjct: 86 tagtgacgtcggaccaggcttcattccccccaa 118
>40264_bna-MIR166a:mirbase
Length = 135
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||
Sbjct: 107 gtcgtcggaccaggcttcattccccccaa 135
>39821_aly-MIR166a:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||||
Sbjct: 129 gtcgtcggaccaggcttcattccccccaa 157
>41171_aqc-MIR166e:mirbase
Length = 147
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 124 gtgtcgtcggaccaggcttcattcccc 150
|||||||||||||||||||||||||||
Sbjct: 115 gtgtcgtcggaccaggcttcattcccc 141
>39420_pta-MIR166a:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 128 cgtcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||||
Sbjct: 64 cgtcggaccaggcttcattccccccaa 90
>41332_ptc-MIR166k:mirbase
Length = 143
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattccccccaa 154
||||||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattccccccaa 138
>41331_ptc-MIR166j:mirbase
Length = 143
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattccccccaa 154
||||||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattccccccaa 138
>41322_ptc-MIR166a:mirbase
Length = 164
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattccccccaa 154
||||||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattccccccaa 159
>42717_zma-MIR166a:mirbase
Length = 213
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 189 tcggaccaggcttcattccccccaa 213
>41939_osa-MIR166c:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattccccccaa 115
>41938_osa-MIR166b:mirbase
Length = 206
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 168 tcggaccaggcttcattccccccaa 192
>41746_bdi-MIR166d:mirbase
Length = 165
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 113 tcggaccaggcttcattccccccaa 137
>41744_bdi-MIR166b:mirbase
Length = 244
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 192 tcggaccaggcttcattccccccaa 216
>41590_vvi-MIR166h:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattccccccaa 93
>41329_ptc-MIR166h:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattccccccaa 96
>41328_ptc-MIR166g:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattccccccaa 98
>41326_ptc-MIR166e:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattccccccaa 101
>41323_ptc-MIR166b:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattccccccaa 101
>41224_csi-MIR166c:mirbase
Length = 138
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattccccccaa 124
>41168_aqc-MIR166b:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattccccccaa 92
>41097_tcc-MIR166d:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 79 tcggaccaggcttcattccccccaa 103
>41094_tcc-MIR166a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattccccccaa 102
>40674_mtr-MIR166g:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattccccccaa 106
>40350_rco-MIR166d:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattccccccaa 91
>40349_rco-MIR166c:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 66 tcggaccaggcttcattccccccaa 90
>40035_ath-MIR166d:mirbase
Length = 113
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 87 tcggaccaggcttcattccccccaa 111
>40032_ath-MIR166a:mirbase
Length = 170
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 134 tcggaccaggcttcattccccccaa 158
>39824_aly-MIR166d:mirbase
Length = 113
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 87 tcggaccaggcttcattccccccaa 111
>39822_aly-MIR166b:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccccaa 154
|||||||||||||||||||||||||
Sbjct: 110 tcggaccaggcttcattccccccaa 134
>42515_sbi-MIR166h:mirbase
Length = 185
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattcccccca 153
||||||||||||||||||||||||
Sbjct: 162 tcggaccaggcttcattcccccca 185
>41025_pvu-MIR166a:mirbase
Length = 670
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattcccccca 153
||||||||||||||||||||||||
Sbjct: 228 tcggaccaggcttcattcccccca 251
>40440_gma-MIR166b:mirbase
Length = 167
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattcccccca 153
||||||||||||||||||||||||
Sbjct: 128 tcggaccaggcttcattcccccca 151
>40267_bna-MIR166d:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattcccccca 153
||||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccccca 100
>40036_ath-MIR166e:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 128 cgtcggaccaggcttcattcccc 150
|||||||||||||||||||||||
Sbjct: 117 cgtcggaccaggcttcattcccc 139
>39825_aly-MIR166e:mirbase
Length = 200
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 128 cgtcggaccaggcttcattcccc 150
|||||||||||||||||||||||
Sbjct: 148 cgtcggaccaggcttcattcccc 170
>39376_pab-MIR166a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 126 gtcgtcggaccaggcttcattcc 148
|||||||||||||||||||||||
Sbjct: 51 gtcgtcggaccaggcttcattcc 73
>41333_ptc-MIR166l:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 tgtcgtcggaccaggcttcattcccc 150
|||| |||||||||||||||||||||
Sbjct: 63 tgtcctcggaccaggcttcattcccc 88
>41330_ptc-MIR166i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 125 tgtcgtcggaccaggcttcattcccc 150
|||| |||||||||||||||||||||
Sbjct: 69 tgtcctcggaccaggcttcattcccc 94
>40675_mtr-MIR166h:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccc 151
||||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattccccc 88
>40668_mtr-MIR166:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccc 151
||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattccccc 103
>40266_bna-MIR166c:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattcccc 150
||||||||||||||||||||||
Sbjct: 92 gtcggaccaggcttcattcccc 113
>40265_bna-MIR166b:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattcccc 150
||||||||||||||||||||||
Sbjct: 90 gtcggaccaggcttcattcccc 111
>40037_ath-MIR166f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattcccc 150
||||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcccc 98
>40034_ath-MIR166c:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccc 151
||||||||||||||||||||||
Sbjct: 103 tcggaccaggcttcattccccc 124
>39826_aly-MIR166f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattcccc 150
||||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcccc 98
>39823_aly-MIR166c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 tcggaccaggcttcattccccc 151
||||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattccccc 116
>39735_smo-MIR166c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattcccc 150
||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccc 127
>39421_pta-MIR166b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 129 gtcggaccaggcttcattcccc 150
||||||||||||||||||||||
Sbjct: 89 gtcggaccaggcttcattcccc 110
