miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41048_ghr-MIR166b:mirbase
          Length = 154

 Score =  305 bits (154), Expect = 5e-84
 Identities = 154/154 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaggggaatgttgtctggaccggggacacttgtgtttctaatccgttttccctgcaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaggggaatgttgtctggaccggggacacttgtgtttctaatccgttttccctgcaata 60

                                                                       
Query: 61  ttgttctgattaacgtggggatctttatattgcttatttttgtaatggattaaggttgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgttctgattaacgtggggatctttatattgcttatttttgtaatggattaaggttgta 120

                                             
Query: 121 ctagtgtcgtcggaccaggcttcattccccccaa 154
           ||||||||||||||||||||||||||||||||||
Sbjct: 121 ctagtgtcgtcggaccaggcttcattccccccaa 154




>40033_ath-MIR166b:mirbase
          Length = 120

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||||||
Sbjct: 88  tagtgtcgtcggaccaggcttcattccccccaa 120




>40351_rco-MIR166e:mirbase
          Length = 131

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 123 agtgtcgtcggaccaggcttcattccccccaa 154
           ||||||||||||||||||||||||||||||||
Sbjct: 99  agtgtcgtcggaccaggcttcattccccccaa 130




>41587_vvi-MIR166e:mirbase
          Length = 166

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 124 gtgtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||||
Sbjct: 129 gtgtcgtcggaccaggcttcattccccccaa 159




>41585_vvi-MIR166c:mirbase
          Length = 160

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 124 gtgtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||||
Sbjct: 123 gtgtcgtcggaccaggcttcattccccccaa 153



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 1  tgaggggaatgttgtctggaccggggacactt 32
          |||||||||||||||||||  || ||||||||
Sbjct: 7  tgaggggaatgttgtctggctcgaggacactt 38




>41532_sly-MIR166b:mirbase
          Length = 201

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
           |||||| ||||||||||||||||||||||||||
Sbjct: 146 tagtgttgtcggaccaggcttcattccccccaa 178




>41324_ptc-MIR166c:mirbase
          Length = 134

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||
Sbjct: 101 gtcgtcggaccaggcttcattccccccaa 129




>41279_ctr-MIR166:mirbase
          Length = 414

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
           ||||| |||||||||||||||||||||||||||
Sbjct: 183 tagtgacgtcggaccaggcttcattccccccaa 215




>41226_csi-MIR166e:mirbase
          Length = 177

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||
Sbjct: 135 gtcgtcggaccaggcttcattccccccaa 163




>41222_csi-MIR166a:mirbase
          Length = 202

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
           ||||| |||||||||||||||||||||||||||
Sbjct: 153 tagtgacgtcggaccaggcttcattccccccaa 185




>40439_gma-MIR166a:mirbase
          Length = 146

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
           |||||| ||||||||||||||||||||||||||
Sbjct: 99  tagtgttgtcggaccaggcttcattccccccaa 131




>40348_rco-MIR166b:mirbase
          Length = 119

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 122 tagtgtcgtcggaccaggcttcattccccccaa 154
           ||||| |||||||||||||||||||||||||||
Sbjct: 86  tagtgacgtcggaccaggcttcattccccccaa 118




>40264_bna-MIR166a:mirbase
          Length = 135

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||
Sbjct: 107 gtcgtcggaccaggcttcattccccccaa 135




>39821_aly-MIR166a:mirbase
          Length = 167

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 126 gtcgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||||
Sbjct: 129 gtcgtcggaccaggcttcattccccccaa 157




>41171_aqc-MIR166e:mirbase
          Length = 147

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 124 gtgtcgtcggaccaggcttcattcccc 150
           |||||||||||||||||||||||||||
Sbjct: 115 gtgtcgtcggaccaggcttcattcccc 141




>39420_pta-MIR166a:mirbase
          Length = 94

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 128 cgtcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||||
Sbjct: 64  cgtcggaccaggcttcattccccccaa 90




>41332_ptc-MIR166k:mirbase
          Length = 143

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 129 gtcggaccaggcttcattccccccaa 154
           ||||||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattccccccaa 138




>41331_ptc-MIR166j:mirbase
          Length = 143

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 129 gtcggaccaggcttcattccccccaa 154
           ||||||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattccccccaa 138




>41322_ptc-MIR166a:mirbase
          Length = 164

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 129 gtcggaccaggcttcattccccccaa 154
           ||||||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattccccccaa 159




>42717_zma-MIR166a:mirbase
          Length = 213

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 189 tcggaccaggcttcattccccccaa 213




>41939_osa-MIR166c:mirbase
          Length = 125

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 91  tcggaccaggcttcattccccccaa 115




>41938_osa-MIR166b:mirbase
          Length = 206

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 168 tcggaccaggcttcattccccccaa 192




>41746_bdi-MIR166d:mirbase
          Length = 165

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 113 tcggaccaggcttcattccccccaa 137




>41744_bdi-MIR166b:mirbase
          Length = 244

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 192 tcggaccaggcttcattccccccaa 216




>41590_vvi-MIR166h:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 69  tcggaccaggcttcattccccccaa 93




>41329_ptc-MIR166h:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 72  tcggaccaggcttcattccccccaa 96




>41328_ptc-MIR166g:mirbase
          Length = 103

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 74  tcggaccaggcttcattccccccaa 98




>41326_ptc-MIR166e:mirbase
          Length = 106

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 77  tcggaccaggcttcattccccccaa 101




>41323_ptc-MIR166b:mirbase
          Length = 106

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 77  tcggaccaggcttcattccccccaa 101




>41224_csi-MIR166c:mirbase
          Length = 138

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattccccccaa 124




>41168_aqc-MIR166b:mirbase
          Length = 94

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattccccccaa 92




>41097_tcc-MIR166d:mirbase
          Length = 119

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 79  tcggaccaggcttcattccccccaa 103




>41094_tcc-MIR166a:mirbase
          Length = 118

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 78  tcggaccaggcttcattccccccaa 102




>40674_mtr-MIR166g:mirbase
          Length = 107

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 82  tcggaccaggcttcattccccccaa 106




>40350_rco-MIR166d:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 67  tcggaccaggcttcattccccccaa 91




>40349_rco-MIR166c:mirbase
          Length = 91

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 66  tcggaccaggcttcattccccccaa 90




>40035_ath-MIR166d:mirbase
          Length = 113

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 87  tcggaccaggcttcattccccccaa 111




>40032_ath-MIR166a:mirbase
          Length = 170

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 134 tcggaccaggcttcattccccccaa 158




>39824_aly-MIR166d:mirbase
          Length = 113

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 87  tcggaccaggcttcattccccccaa 111




>39822_aly-MIR166b:mirbase
          Length = 148

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 130 tcggaccaggcttcattccccccaa 154
           |||||||||||||||||||||||||
Sbjct: 110 tcggaccaggcttcattccccccaa 134




>42515_sbi-MIR166h:mirbase
          Length = 185

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 130 tcggaccaggcttcattcccccca 153
           ||||||||||||||||||||||||
Sbjct: 162 tcggaccaggcttcattcccccca 185




>41025_pvu-MIR166a:mirbase
          Length = 670

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 130 tcggaccaggcttcattcccccca 153
           ||||||||||||||||||||||||
Sbjct: 228 tcggaccaggcttcattcccccca 251




>40440_gma-MIR166b:mirbase
          Length = 167

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 130 tcggaccaggcttcattcccccca 153
           ||||||||||||||||||||||||
Sbjct: 128 tcggaccaggcttcattcccccca 151




>40267_bna-MIR166d:mirbase
          Length = 128

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 130 tcggaccaggcttcattcccccca 153
           ||||||||||||||||||||||||
Sbjct: 77  tcggaccaggcttcattcccccca 100




>40036_ath-MIR166e:mirbase
          Length = 143

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 128 cgtcggaccaggcttcattcccc 150
           |||||||||||||||||||||||
Sbjct: 117 cgtcggaccaggcttcattcccc 139




>39825_aly-MIR166e:mirbase
          Length = 200

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 128 cgtcggaccaggcttcattcccc 150
           |||||||||||||||||||||||
Sbjct: 148 cgtcggaccaggcttcattcccc 170




>39376_pab-MIR166a:mirbase
          Length = 90

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 126 gtcgtcggaccaggcttcattcc 148
           |||||||||||||||||||||||
Sbjct: 51  gtcgtcggaccaggcttcattcc 73




>41333_ptc-MIR166l:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 125 tgtcgtcggaccaggcttcattcccc 150
           |||| |||||||||||||||||||||
Sbjct: 63  tgtcctcggaccaggcttcattcccc 88




>41330_ptc-MIR166i:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 125 tgtcgtcggaccaggcttcattcccc 150
           |||| |||||||||||||||||||||
Sbjct: 69  tgtcctcggaccaggcttcattcccc 94




>40675_mtr-MIR166h:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 130 tcggaccaggcttcattccccc 151
           ||||||||||||||||||||||
Sbjct: 67  tcggaccaggcttcattccccc 88




>40668_mtr-MIR166:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 130 tcggaccaggcttcattccccc 151
           ||||||||||||||||||||||
Sbjct: 82  tcggaccaggcttcattccccc 103




>40266_bna-MIR166c:mirbase
          Length = 128

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 gtcggaccaggcttcattcccc 150
           ||||||||||||||||||||||
Sbjct: 92  gtcggaccaggcttcattcccc 113




>40265_bna-MIR166b:mirbase
          Length = 118

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 gtcggaccaggcttcattcccc 150
           ||||||||||||||||||||||
Sbjct: 90  gtcggaccaggcttcattcccc 111




>40037_ath-MIR166f:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 gtcggaccaggcttcattcccc 150
           ||||||||||||||||||||||
Sbjct: 77  gtcggaccaggcttcattcccc 98




>40034_ath-MIR166c:mirbase
          Length = 139

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 130 tcggaccaggcttcattccccc 151
           ||||||||||||||||||||||
Sbjct: 103 tcggaccaggcttcattccccc 124




>39826_aly-MIR166f:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 gtcggaccaggcttcattcccc 150
           ||||||||||||||||||||||
Sbjct: 77  gtcggaccaggcttcattcccc 98




>39823_aly-MIR166c:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 130 tcggaccaggcttcattccccc 151
           ||||||||||||||||||||||
Sbjct: 95  tcggaccaggcttcattccccc 116




>39735_smo-MIR166c:mirbase
          Length = 138

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 gtcggaccaggcttcattcccc 150
           ||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccc 127




>39421_pta-MIR166b:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 129 gtcggaccaggcttcattcccc 150
           ||||||||||||||||||||||
Sbjct: 89  gtcggaccaggcttcattcccc 110