miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48541_gma-miR159c:pmrd
          Length = 185

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 139 taccttgatcttttggtattggagtgaagggagctcc 175
           |||||||||||||| ||||||||||||||||||||||
Sbjct: 137 taccttgatcttttagtattggagtgaagggagctcc 173




>51607_ptc-miR159f:pmrd
          Length = 201

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 148 cttttggtattggagtgaagggagctc 174
           ||||| |||||||||||||||||||||
Sbjct: 165 ctttttgtattggagtgaagggagctc 191




>51606_ptc-miR159e:pmrd
          Length = 192

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 168
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175

                  
Query: 169 gagctcc 175
           |||||||
Sbjct: 176 gagctcc 182




>54688_tae-miR319c:pmrd
          Length = 253

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 attggagtgaagggagctcca 176
           |||||||||||||||||||||
Sbjct: 1   attggagtgaagggagctcca 21




>54775_vvi-miR159a:pmrd
          Length = 194

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 112 gggtttgcatgccctgggagatgagtttaccttgatcttt-tggtattggagtgaaggga 170
           |||| |||||| ||| ||||| | | || ||||||||||| |||  ||||||||||||||
Sbjct: 119 gggtgtgcatgacctcggagaagtggttgccttgatctttctggccttggagtgaaggga 178

               
Query: 171 gctc 174
           ||||
Sbjct: 179 gctc 182




>54687_tae-miR319b:pmrd
          Length = 184

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 ttggagtgaagggagctcca 176
           ||||||||||||||||||||
Sbjct: 165 ttggagtgaagggagctcca 184




>54644_sof-miR319c:pmrd
          Length = 184

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 ttggagtgaagggagctcca 176
           ||||||||||||||||||||
Sbjct: 165 ttggagtgaagggagctcca 184




>48822_osa-miR159d:pmrd
          Length = 189

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 112 gggtttgcatgccctgggagatga 135
           ||||||||||| ||||||||||||
Sbjct: 111 gggtttgcatgacctgggagatga 134