miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40451_gma-MIR169c:mirbase
Length = 115
Score = 228 bits (115), Expect = 7e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 1 aagtgggatgaagccaaggatgacttgccgacattaatttgccattaagctaacgagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtgggatgaagccaaggatgacttgccgacattaatttgccattaagctaacgagtta 60
Query: 61 ggtagaatcatttgttagattttcccggcaggtcatcctctggctatatttggct 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtagaatcatttgttagattttcccggcaggtcatcctctggctatatttggct 115
>41349_ptc-MIR169a:mirbase
Length = 165
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 aagtgggatgaagccaaggatgacttgccgac 32
|||||| ||| |||||||||||||||||||||
Sbjct: 1 aagtggtatgcagccaaggatgacttgccgac 32
>40689_mtr-MIR169l:mirbase
Length = 240
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccg 30
||||||||||||||||||||||||
Sbjct: 2 gatgaagccaaggatgacttgccg 25
>40681_mtr-MIR169d:mirbase
Length = 240
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccg 30
||||||||||||||||||||||||
Sbjct: 2 gatgaagccaaggatgacttgccg 25
>41602_vvi-MIR169f:mirbase
Length = 184
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacattaatttgc 42
|||||||||||||||||||| | ||||||||
Sbjct: 14 agccaaggatgacttgccgaaaataatttgc 44
>42745_zma-MIR169c:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gggatgaagccaaggatgacttgccg 30
|||||| |||||||||||||||||||
Sbjct: 15 gggatgcagccaaggatgacttgccg 40
>41966_osa-MIR169c:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gggatgaagccaaggatgacttgccg 30
|||||| |||||||||||||||||||
Sbjct: 5 gggatgcagccaaggatgacttgccg 30
>41755_bdi-MIR169c:mirbase
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gggatgaagccaaggatgacttgccg 30
|||||| |||||||||||||||||||
Sbjct: 27 gggatgcagccaaggatgacttgccg 52
>41357_ptc-MIR169c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccgac 32
|||| |||||||||||||||||||||
Sbjct: 7 gatgcagccaaggatgacttgccgac 32
>41356_ptc-MIR169b:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccgac 32
|||| |||||||||||||||||||||
Sbjct: 7 gatgcagccaaggatgacttgccgac 32
>40679_mtr-MIR169b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgaca 33
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgaca 43
>40678_mtr-MIR169a:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgaca 33
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgaca 43
>42758_zma-MIR169p:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatta 36
||||||||||||||||||| |||||
Sbjct: 3 agccaaggatgacttgccggcatta 27
>41979_osa-MIR169p:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 ggatgaagccaaggatgacttgccg 30
||||| |||||||||||||||||||
Sbjct: 121 ggatgcagccaaggatgacttgccg 97
>41758_bdi-MIR169f:mirbase
Length = 151
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 ggatgaagccaaggatgacttgccg 30
||||| |||||||||||||||||||
Sbjct: 28 ggatgcagccaaggatgacttgccg 52
>41754_bdi-MIR169b:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 agtgggatgaagccaaggatgacttgccg 30
||||| ||| |||||||||||||||||||
Sbjct: 10 agtggaatgtagccaaggatgacttgccg 38
>41603_vvi-MIR169g:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgac 32
|||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccgac 34
>41597_vvi-MIR169a:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 agtgggatgaagccaaggatgacttgccg 30
||||| ||| |||||||||||||||||||
Sbjct: 4 agtggaatgcagccaaggatgacttgccg 32
>41104_tcc-MIR169c:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgac 32
|||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgac 42
>40356_rco-MIR169a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacattaattt 40
||||||||||||||||||| ||| |||||
Sbjct: 7 agccaaggatgacttgccggcatcaattt 35
>42744_zma-MIR169b:mirbase
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>42743_zma-MIR169a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>42533_sbi-MIR169e:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgccggcatt 25
>42529_sbi-MIR169a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>41964_osa-MIR169a:mirbase
Length = 173
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 39 agccaaggatgacttgccga 58
>41613_vvi-MIR169q:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 13 agccaaggatgacttgccggcatt 36
>41536_sly-MIR169c:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccga 61
>41370_ptc-MIR169p:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gaagccaaggatgacttgcc 29
||||||||||||||||||||
Sbjct: 10 gaagccaaggatgacttgcc 29
>41369_ptc-MIR169o:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 gaagccaaggatgacttgcc 29
||||||||||||||||||||
Sbjct: 10 gaagccaaggatgacttgcc 29
>41361_ptc-MIR169g:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 12 agccaaggatgacttgccggcatt 35
>41358_ptc-MIR169d:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccgacatt 35
||||||||||||||||||| ||||
Sbjct: 12 agccaaggatgacttgccggcatt 35
>41106_tcc-MIR169e:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>41102_tcc-MIR169a:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>40690_mtr-MIR169m:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 83 tcccggcaggtcatcctctggctatatt 110
||||||||||||||||| |||||||||
Sbjct: 73 tcccggcaggtcatccttcggctatatt 100
>40682_mtr-MIR169e:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 83 tcccggcaggtcatcctctggctatatt 110
||||||||||||||||| |||||||||
Sbjct: 74 tcccggcaggtcatccttcggctatatt 101
>40450_gma-MIR169b:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>40449_gma-MIR169a:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 gatgaagccaaggatgacttgccg 30
|||| |||||||||||||||||||
Sbjct: 17 gatgcagccaaggatgacttgccg 40
>40273_bna-MIR169b:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccga 38
>40272_bna-MIR169a:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccga 39
>40049_ath-MIR169e:mirbase
Length = 217
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccga 90
>40048_ath-MIR169d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62
>40045_ath-MIR169a:mirbase
Length = 226
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccga 38
>39838_aly-MIR169e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 53 agccaaggatgacttgccga 72
>39837_aly-MIR169d:mirbase
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62
>39834_aly-MIR169a:mirbase
Length = 263
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgacttgccga 31
||||||||||||||||||||
Sbjct: 28 agccaaggatgacttgccga 47